Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	593	264.2	13311096	97.8%	13018251	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,197,191	T→C	Q31R (CAG→CGG)	glnE ←	GlnE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,197,191	0	T	C	100.0%	1022.0 / NA	278	Q31R (CAG→CGG)	glnE	GlnE
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (152/126); total (152/126)

Only 100 of 298 total aligned reads displayed.

GGCGGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCTGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTTC  >  NC_000913/3197101‑3197280

ggcggTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCcgt                                                                                         <  2:440565/93‑1 (MQ=255)

ggcggTTGGCTTTCCAGTCCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCcgt                                                                                         <  1:4211550/93‑1 (MQ=255)

 gcggTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCcgtg                                                                                        >  2:2956925/1‑93 (MQ=255)

 gcggTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCcgtg                                                                                        <  2:3597736/93‑1 (MQ=255)

 gcggTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCcgtg                                                                                        <  2:610309/93‑1 (MQ=255)

 gcggTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCcgtg                                                                                        >  1:6036471/1‑93 (MQ=255)

 gcggTTGACTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCcgtg                                                                                        <  2:2581918/93‑1 (MQ=255)

  cggTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTgc                                                                                       <  2:73444/93‑1 (MQ=255)

   ggTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTgcg                                                                                      >  2:3236702/1‑93 (MQ=255)

    gTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTgcgc                                                                                     >  1:2360006/1‑93 (MQ=255)

     ttGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCt                                                                                    <  2:4164266/93‑1 (MQ=255)

       gtcTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTaa                                                                                  <  2:835574/91‑1 (MQ=255)

        gCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAg                                                                                 <  2:2260119/93‑1 (MQ=255)

         cTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGt                                                                                <  2:4107624/93‑1 (MQ=255)

          tttCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTg                                                                               <  2:3743847/93‑1 (MQ=255)

           ttCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGa                                                                              >  1:4909989/1‑93 (MQ=255)

           ttCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGa                                                                              <  1:3733060/93‑1 (MQ=255)

           tcccATTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGAAAGTACTGACTTCGCCCGTGCGCTAAGTGa                                                                              <  1:6190674/91‑1 (MQ=255)

            tCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGAt                                                                             <  1:313818/93‑1 (MQ=255)

            tCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGAt                                                                             >  1:5867706/1‑93 (MQ=255)

             ccAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGAtt                                                                            <  1:4042839/93‑1 (MQ=255)

              cAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTc                                                                           >  2:4427852/1‑93 (MQ=255)

              cAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTc                                                                           >  1:218855/1‑93 (MQ=255)

               aGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTcc                                                                          >  2:4886767/1‑93 (MQ=255)

               aGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTcc                                                                          >  2:6472424/1‑93 (MQ=255)

                gTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCt                                                                         <  1:859001/93‑1 (MQ=255)

                gTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCt                                                                         >  2:6403366/1‑93 (MQ=255)

                gTTCCGTCAGCCACTCTCGATGCGCCATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCTTGCGCTAAGTGATTcat                                                                         >  1:5338953/1‑91 (MQ=255)

                gTTCCGCCAGCCACTCTGGATGCGCAATCACGCTGTCCTTCACAAAATCACTAAAAGTAAGTACTGACTTTGACCGTGCGCTAAGTGATTCCt                                                                         >  1:1043954/1‑93 (MQ=255)

                  tCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCg                                                                       <  2:2167378/93‑1 (MQ=255)

                   ccGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCgg                                                                      <  1:1427337/93‑1 (MQ=255)

                    cGTCAGCCACGCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGc                                                                     <  1:5963807/93‑1 (MQ=255)

                     gTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCt                                                                    >  1:1707346/1‑93 (MQ=255)

                     gTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCt                                                                    >  1:5424675/1‑93 (MQ=255)

                      tCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTa                                                                   >  1:5486888/1‑93 (MQ=255)

                        aGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTaaa                                                                 >  1:2468596/1‑93 (MQ=255)

                         gCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAg                                                                <  1:1553843/93‑1 (MQ=255)

                          ccACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAgg                                                               <  2:200057/93‑1 (MQ=255)

                           cACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGc                                                              <  2:1590853/93‑1 (MQ=255)

                            aCTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGct                                                             >  1:1192092/1‑93 (MQ=255)

                            aCTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGct                                                             >  1:6589975/1‑93 (MQ=255)

                             ctctGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGctc                                                            >  2:3260142/1‑93 (MQ=255)

                             ctctGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGctc                                                            <  2:4546288/93‑1 (MQ=255)

                             atctGGATGCGCAATCACGCTGTACTGCACAAAATCACTAAAAGTAAGTACTGACTTGGCCCGTGCGCTAAGTGATGCCTCGGCTAAAGGctc                                                            <  1:3553158/92‑1 (MQ=255)

                              tctGGATGCGCACTCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGctct                                                           <  1:3762314/93‑1 (MQ=255)

                              tctGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGctct                                                           >  2:2490226/1‑93 (MQ=255)

                              tctGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGctct                                                           <  1:5088988/93‑1 (MQ=255)

                              tctGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGctct                                                           <  2:6286275/93‑1 (MQ=255)

                                tGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTgg                                                         <  2:101564/93‑1 (MQ=255)

                                tGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTgg                                                         <  2:1908843/93‑1 (MQ=255)

                                tGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTgg                                                         >  1:4794756/1‑93 (MQ=255)

                                 ggATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGc                                                        <  1:1227599/93‑1 (MQ=255)

                                  gATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCa                                                       >  2:3585346/1‑93 (MQ=255)

                                   aTGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAg                                                      <  1:1732953/93‑1 (MQ=255)

                                     gcgcAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGcc                                                    >  2:6597147/1‑93 (MQ=255)

                                       gcAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCt                                                                         >  2:3439773/1‑70 (MQ=255)

                                       gcAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGc                                                  >  2:1119813/1‑93 (MQ=255)

                                       gcAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGc                                                  >  2:1314871/1‑93 (MQ=255)

                                          aTCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTca                                               >  1:2901214/1‑93 (MQ=255)

                                             aCGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTcaaca                                            >  1:6374155/1‑93 (MQ=255)

                                             aCGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTcaaca                                            >  1:3381478/1‑93 (MQ=255)

                                               gCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCaacaac                                          <  2:4461398/93‑1 (MQ=255)

                                               gCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCaacaac                                          >  2:1776979/1‑93 (MQ=255)

                                                cTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACg                                         >  1:2254754/1‑93 (MQ=255)

                                                cTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACg                                         <  1:95506/93‑1 (MQ=255)

                                                 tGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACCACgg                                        >  2:5879622/1‑93 (MQ=255)

                                                 tGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACgg                                        <  1:3467202/93‑1 (MQ=255)

                                                   tCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTc                                      >  2:3783129/1‑93 (MQ=255)

                                                    ccTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCt                                     <  1:38388/93‑1 (MQ=255)

                                                     cTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTg                                    >  2:5235247/1‑93 (MQ=255)

                                                       gCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGcc                                  >  2:5563010/1‑93 (MQ=255)

                                                         acaAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAg                                <  2:2605994/93‑1 (MQ=255)

                                                          caAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGt                               <  2:2887319/93‑1 (MQ=255)

                                                           aaaaTCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTa                              <  1:5201235/93‑1 (MQ=255)

                                                             aaTCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTAct                            >  1:4992599/1‑93 (MQ=255)

                                                              aTCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTActg                           >  1:4407942/1‑93 (MQ=255)

                                                               tCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTActgc                          >  1:4556983/1‑93 (MQ=255)

                                                                   tAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTa                      >  1:1302069/1‑93 (MQ=255)

                                                                      aagtaagtACTGACTTCGCCCGTGCGCTAAGTGATTCTTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACg                   <  1:4154648/93‑1 (MQ=255)

                                                                      aagtaagtACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACg                   <  2:2786150/93‑1 (MQ=255)

                                                                       agtaagtaCTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACgg                  >  1:1121375/1‑93 (MQ=255)

                                                                       agtaagtaCTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACgg                  <  2:775858/93‑1 (MQ=255)

                                                                         taagtaCTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTg                <  1:1985877/93‑1 (MQ=255)

                                                                           agtaCTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGaa              >  2:6019268/1‑93 (MQ=255)

                                                                            gtaCTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAag             >  1:2066589/1‑93 (MQ=255)

                                                                             taCTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAaga            >  2:4303112/1‑93 (MQ=255)

                                                                             taCTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAaga            <  2:5436498/93‑1 (MQ=255)

                                                                              aCTGACTTCGCCCGTGCGCTCAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAagag           >  2:1493262/1‑93 (MQ=255)

                                                                               cTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAagaga          <  1:3216132/93‑1 (MQ=255)

                                                                                tggcTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAagagag         <  1:180430/90‑1 (MQ=255)

                                                                                 gACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGc        <  1:5753016/93‑1 (MQ=255)

                                                                                 gACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGc        <  2:3908626/93‑1 (MQ=255)

                                                                                   cTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCGAGTACTGCTGTAACGGTGAAGAGCGCgg      >  2:2239399/1‑93 (MQ=255)

                                                                                   cTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCgg      <  2:5155251/93‑1 (MQ=255)

                                                                                   cTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCgg      >  1:2799963/1‑93 (MQ=255)

                                                                                    ttCGCCCGTGCTCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGc     >  2:23060/1‑93 (MQ=255)

                                                                                    ttCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGc     >  2:169901/1‑93 (MQ=255)

                                                                                     tCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCt    <  1:3059332/93‑1 (MQ=255)

                                                                                     tCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCt    <  1:1942000/93‑1 (MQ=255)

                                                                                      cGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCtt   <  2:385894/93‑1 (MQ=255)

GGCGGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCTGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTTC  >  NC_000913/3197101‑3197280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGCGGCGGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCTGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTTCATAA  >  NC_000913/3197098‑3197284

TGCGGCGGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCC                                                                                               <  SRR4302547.933263/94‑1 (MQ=60)

TGCGGCGGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCC                                                                                               <  SRR4302547.384538/94‑1 (MQ=60)

TGCGGCGGTGGCCTTTCCACTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCC                                                                                               <  SRR4302547.5812255/94‑1 (MQ=60)

 GCGGCGGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCG                                                                                              <  SRR4302547.6105112/94‑1 (MQ=60)

 GCGGCGGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCG                                                                                              <  SRR4302547.1804049/94‑1 (MQ=60)

 GCGGCGGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCG                                                                                              >  SRR4302547.6785451/1‑94 (MQ=60)

 GCGGCGGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCG                                                                                              >  SRR4302547.5936202/1‑94 (MQ=60)

   GGCGGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTG                                                                                            >  SRR4302547.4159736/1‑94 (MQ=60)

   GGCGGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTG                                                                                            >  SRR4302547.6161739/1‑94 (MQ=60)

   GGCGGTTGGCTTTCCAGTCCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTG                                                                                            <  SRR4302547.4297504/94‑1 (MQ=60)

      GGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGC                                                                                         >  SRR4302547.648124/1‑94 (MQ=60)

      GGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGC                                                                                         >  SRR4302547.5543381/1‑94 (MQ=60)

      GGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGC                                                                                         >  SRR4302547.2407830/1‑94 (MQ=60)

      GGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGC                                                                                         >  SRR4302547.2017459/1‑94 (MQ=60)

        TTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTA                                                                                       >  SRR4302547.1711152/1‑94 (MQ=60)

        TTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTA                                                                                       >  SRR4302547.3679855/1‑94 (MQ=60)

           GCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGT                                                                                    <  SRR4302547.4245280/94‑1 (MQ=60)

           GCTTTCCAGTACCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGT                                                                                    <  SRR4302547.4817361/94‑1 (MQ=60)

            CTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTG                                                                                   <  SRR4302547.2223244/94‑1 (MQ=60)

            CTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTG                                                                                   <  SRR4302547.1263171/94‑1 (MQ=60)

             TTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGA                                                                                  >  SRR4302547.5011668/1‑94 (MQ=60)

              TTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGAT                                                                                 >  SRR4302547.5989153/1‑94 (MQ=60)

              TTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGAT                                                                                 <  SRR4302547.3809282/94‑1 (MQ=60)

              TCCCATTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGAAAGTACTGACTTCGCCCGTGCGCTAAGTGAT                                                                                 <  SRR4302547.6319190/94‑1 (MQ=60)

               TCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATT                                                                                <  SRR4302547.319664/94‑1 (MQ=60)

                CCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTC                                                                               >  SRR4302547.222976/1‑94 (MQ=60)

                CCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTC                                                                               <  SRR4302547.4124935/94‑1 (MQ=60)

                 CAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCC                                                                              >  SRR4302547.178653/1‑94 (MQ=60)

                 CAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCC                                                                              >  SRR4302547.5352043/1‑94 (MQ=60)

                  AGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCT                                                                             >  SRR4302547.5133987/1‑94 (MQ=60)

                  AGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCT                                                                             <  SRR4302547.3621200/94‑1 (MQ=60)

                  AGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCT                                                                             <  SRR4302547.5534018/94‑1 (MQ=60)

                  AGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCT                                                                             <  SRR4302547.4234167/94‑1 (MQ=60)

                  AGTTCCGTCAGCCACTCTCGATGCGCCATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCTTGCGCTAAGTGATTCAT                                                                             >  SRR4302547.5449003/1‑94 (MQ=60)

                  AGTTCCGCCAGCCACTCTGGATGCGCAATCACGCTGTCCTTCACAAAATCACTAAAAGTAAGTACTGACTTTGACCGTGCGCTAAGTGATTCCT                                                                             >  SRR4302547.1064562/1‑94 (MQ=60)

                   acgctcttccgatcttgacattCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTC                                                                            <  SRR4302547.3509910/72‑1 (MQ=60)

                   GTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTC                                                                            <  SRR4302547.875413/94‑1 (MQ=60)

                   GTCCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTC                                                                            <  SRR4302547.3438593/94‑1 (MQ=60)

                    TTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCG                                                                           <  SRR4302547.2452229/94‑1 (MQ=60)

                      CCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGC                                                                         <  SRR4302547.1455895/94‑1 (MQ=60)

                       CGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCT                                                                        >  SRR4302547.1740934/1‑94 (MQ=60)

                       CGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCT                                                                        >  SRR4302547.5536860/1‑94 (MQ=60)

                       CGTCAGCCACGCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCT                                                                        <  SRR4302547.6087492/94‑1 (MQ=60)

                        GTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTA                                                                       >  SRR4302547.5600189/1‑94 (MQ=60)

                        GTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTA                                                                       >  SRR4302547.6100226/1‑94 (MQ=60)

                         TCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAA                                                                      >  SRR4302547.1339515/1‑94 (MQ=60)

                         TCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAA                                                                      >  SRR4302547.6091651/1‑94 (MQ=60)

                          CAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAA                                                                     >  SRR4302547.2518491/1‑94 (MQ=60)

                          CAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAA                                                                     >  SRR4302547.4925827/1‑94 (MQ=60)

                           AGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAG                                                                    <  SRR4302547.2493821/94‑1 (MQ=60)

                           AGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAG                                                                    >  SRR4302547.1180621/1‑94 (MQ=60)

                           AGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAG                                                                    >  SRR4302547.5717669/1‑94 (MQ=60)

                            GCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGG                                                                   <  SRR4302547.1584765/94‑1 (MQ=60)

                              CACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCT                                                                 >  SRR4302547.1342728/1‑94 (MQ=60)

                              CACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCT                                                                 >  SRR4302547.6727157/1‑94 (MQ=60)

                              CACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCT                                                                 >  SRR4302547.1216146/1‑94 (MQ=60)

                              CACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCT                                                                 >  SRR4302547.927831/1‑94 (MQ=60)

                              CACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCT                                                                 <  SRR4302547.599630/94‑1 (MQ=60)

                                ATCTGGATGCGCAATCACGCTGTACTGCACAAAATCACTAAAAGTAAGTACTGACTTGGCCCGTGCGCTAAGTGATGCCTCGGCTAAAGGCTCT                                                               <  SRR4302547.3625674/94‑1 (MQ=60)

                                 TCTGGATGCGCACTCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTG                                                              <  SRR4302547.3839063/94‑1 (MQ=60)

                                 TCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTG                                                              <  SRR4302547.5193956/94‑1 (MQ=60)

                                 TCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTG                                                              <  SRR4302547.5270771/94‑1 (MQ=60)

                                  CTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGG                                                             <  SRR4302547.3028389/94‑1 (MQ=60)

                                  CTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGG                                                             >  SRR4302547.4894111/1‑94 (MQ=60)

                                   TGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGC                                                            <  SRR4302547.2388830/94‑1 (MQ=60)

                                    GGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCA                                                           <  SRR4302547.1252365/94‑1 (MQ=60)

                                     GATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAG                                                          <  SRR4302547.5333652/94‑1 (MQ=60)

                                      ATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGC                                                         <  SRR4302547.4702729/94‑1 (MQ=60)

                                      ATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGC                                                         <  SRR4302547.1766995/94‑1 (MQ=60)

                                        GCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCG                                                       >  SRR4302547.4453057/1‑94 (MQ=60)

                                         CGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGC                                                      <  SRR4302547.904790/94‑1 (MQ=60)

                                          CCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCT                                                     <  SRR4302547.1216415/94‑1 (MQ=60)

                                           CAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTC                                                    >  SRR4302547.1755391/1‑94 (MQ=60)

                                           CAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTC                                                    >  SRR4302547.4277100/1‑94 (MQ=60)

                                           CAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTC                                                    <  SRR4302547.3639432/94‑1 (MQ=60)

                                           CAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGCGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTG                                                    >  SRR4302547.598537/1‑94 (MQ=60)

                                            AATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCA                                                   >  SRR4302547.2959062/1‑94 (MQ=60)

                                             ATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAA                                                  >  SRR4302547.520999/1‑94 (MQ=60)

                                               CACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACA                                                >  SRR4302547.1112380/1‑94 (MQ=60)

                                               CACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACA                                                >  SRR4302547.6507143/1‑94 (MQ=60)

                                               CACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACA                                                >  SRR4302547.3450200/1‑94 (MQ=60)

                                                ACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAA                                               >  SRR4302547.3621442/1‑94 (MQ=60)

                                                  GCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACG                                             >  SRR4302547.2300286/1‑94 (MQ=60)

                                                   CTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGG                                            <  SRR4302547.97280/94‑1 (MQ=60)

                                                   CTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGG                                            >  SRR4302547.3468686/1‑94 (MQ=60)

                                                   CTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGG                                            <  SRR4302547.2060506/94‑1 (MQ=60)

                                                    TGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGT                                           <  SRR4302547.3537906/94‑1 (MQ=60)

                                                    TGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGT                                           >  SRR4302547.2866879/1‑94 (MQ=60)

                                                    TGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGT                                           <  SRR4302547.1507059/94‑1 (MQ=60)

                                                    TGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGA                                           >  SRR4302547.1307309/1‑94 (MQ=60)

                                                     GTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTC                                          >  SRR4302547.2317176/1‑94 (MQ=60)

                                                      TCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCT                                         >  SRR4302547.4630883/1‑94 (MQ=60)

                                                       CCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTG                                        <  SRR4302547.39106/94‑1 (MQ=60)

                                                       CCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTG                                        >  SRR4302547.3858655/1‑94 (MQ=60)

                                                        CTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGC                                       >  SRR4302547.3178334/1‑94 (MQ=60)

                                                         TGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGGCTGCC                                      >  SRR4302547.2092679/1‑94 (MQ=60)

                                                          GCACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCA                                     >  SRR4302547.2243910/1‑94 (MQ=60)

                                                           CACAAAACCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAG                                    <  SRR4302547.5127855/94‑1 (MQ=60)

                                                           AACAAACTCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCAAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAG                                    <  SRR4302547.3844537/94‑1 (MQ=60)

                                                            ACAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGT                                   >  SRR4302547.1163710/1‑94 (MQ=60)

                                                             CAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTA                                  >  SRR4302547.2006808/1‑94 (MQ=60)

                                                             AAAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTA                                  <  SRR4302547.4076696/94‑1 (MQ=60)

                                                              AAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTAC                                 <  SRR4302547.5308264/94‑1 (MQ=60)

                                                              AAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTAC                                 <  SRR4302547.164799/94‑1 (MQ=60)

                                                              AAAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTAC                                 <  SRR4302547.6342983/94‑1 (MQ=60)

                                                               AAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTCCT                                <  SRR4302547.6685276/94‑1 (MQ=60)

                                                               AAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACT                                <  SRR4302547.630167/94‑1 (MQ=60)

                                                               AAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACT                                >  SRR4302547.5927495/1‑94 (MQ=60)

                                                               AAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACT                                >  SRR4302547.5969717/1‑94 (MQ=60)

                                                               AAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACT                                <  SRR4302547.2940277/94‑1 (MQ=60)

                                                               AAATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACT                                >  SRR4302547.5095795/1‑94 (MQ=60)

                                                                AATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTG                               >  SRR4302547.6170758/1‑94 (MQ=60)

                                                                AATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTG                               >  SRR4302547.4498784/1‑94 (MQ=60)

                                                                 ATCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGC                              >  SRR4302547.4651259/1‑94 (MQ=60)

                                                                  TCACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCT                             <  SRR4302547.2548812/94‑1 (MQ=60)

                                                                  TCACTAAAAGTAAGTACTGACTCCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCT                             <  SRR4302547.4921267/94‑1 (MQ=60)

                                                                   CACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTG                            <  SRR4302547.3413289/94‑1 (MQ=60)

                                                                    ACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGT                           <  SRR4302547.228379/94‑1 (MQ=60)

                                                                    ACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGT                           >  SRR4302547.314087/1‑94 (MQ=60)

                                                                    ACTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGT                           >  SRR4302547.2748297/1‑94 (MQ=60)

                                                                     CTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTA                          >  SRR4302547.1328267/1‑94 (MQ=60)

                                                                     CTAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTA                          >  SRR4302547.1016671/1‑94 (MQ=60)

                                                                      TAAAAGTAGGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAA                         >  SRR4302547.6672756/1‑94 (MQ=60)

                                                                      TAAAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAA                         <  SRR4302547.1240696/94‑1 (MQ=60)

                                                                        AAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACG                       >  SRR4302547.506083/1‑94 (MQ=60)

                                                                        AAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACG                       <  SRR4302547.1754447/94‑1 (MQ=60)

                                                                        AAAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACG                       >  SRR4302547.3828797/1‑94 (MQ=60)

                                                                         AAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCTTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGG                      <  SRR4302547.4239282/94‑1 (MQ=60)

                                                                         AAGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGG                      >  SRR4302547.1143988/1‑94 (MQ=60)

                                                                          AGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGT                     <  SRR4302547.5456368/94‑1 (MQ=60)

                                                                          AGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGT                     <  SRR4302547.5021487/94‑1 (MQ=60)

                                                                          AGTAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGT                     <  SRR4302547.3822387/94‑1 (MQ=60)

                                                                            TAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGA                   <  SRR4302547.2025310/94‑1 (MQ=60)

                                                                            TAAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGA                   <  SRR4302547.4036996/94‑1 (MQ=60)

                                                                             AAGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAA                  <  SRR4302547.5811035/94‑1 (MQ=60)

                                                                              AGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAG                 >  SRR4302547.3237253/1‑94 (MQ=60)

                                                                              AGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAG                 <  SRR4302547.3258198/94‑1 (MQ=60)

                                                                              AGTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAG                 >  SRR4302547.2107830/1‑94 (MQ=60)

                                                                               GTACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGA                >  SRR4302547.4371487/1‑94 (MQ=60)

                                                                               GTACTGACTTCGCCCGTGCGCTAAGTGATACCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGA                <  SRR4302547.1523749/94‑1 (MQ=60)

                                                                                TACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAG               <  SRR4302547.1801619/94‑1 (MQ=60)

                                                                                 ACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGA              >  SRR4302547.1915955/1‑94 (MQ=60)

                                                                                 ACTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGA              <  SRR4302547.70830/94‑1 (MQ=60)

                                                                                  CTGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAG             <  SRR4302547.3280285/94‑1 (MQ=60)

                                                                                   TGGCTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGC            <  SRR4302547.183816/94‑1 (MQ=60)

                                                                                   TGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGC            <  SRR4302547.782128/94‑1 (MQ=60)

                                                                                   TGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGC            <  SRR4302547.5576380/94‑1 (MQ=60)

                                                                                   TGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGC            <  SRR4302547.1954292/94‑1 (MQ=60)

                                                                                   TGACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGC            >  SRR4302547.2168656/1‑94 (MQ=60)

                                                                                    GACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCG           <  SRR4302547.5871947/94‑1 (MQ=60)

                                                                                     ACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGG          >  SRR4302547.4534364/1‑94 (MQ=60)

                                                                                     ACTTCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGG          >  SRR4302547.2856029/1‑94 (MQ=60)

                                                                                        TCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTT       <  SRR4302547.1980505/94‑1 (MQ=60)

                                                                                        TCGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTT       <  SRR4302547.3120193/94‑1 (MQ=60)

                                                                                         CGCCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTTC      <  SRR4302547.2989845/94‑1 (MQ=60)

                                                                                           CCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTTCAT    <  SRR4302547.1291884/94‑1 (MQ=60)

                                                                                           CCCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTTCAT    >  SRR4302547.623630/1‑94 (MQ=60)

                                                                                            CCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTTCATA   >  SRR4302547.6429081/1‑94 (MQ=60)

                                                                                            CCGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTTCATA   <  SRR4302547.5429459/94‑1 (MQ=60)

                                                                                             CGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTTCATAA  <  SRR4302547.4006856/94‑1 (MQ=60)

                                                                                             CGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTTCATAA  >  SRR4302547.5663553/1‑94 (MQ=60)

TGCGGCGGTTGGCTTTCCAGTTCCGTCAGCCACTCTGGATGCGCAATCACGCTGTCCTGCACAAAATCACTAAAAGTAAGTACTGACTTCGCCTGTGCGCTAAGTGATTCCTCGGCTAAAGGCTCTGGCAGCCGCTCAACAACGGTCTGCCAGTACTGCTGTAACGGTGAAGAGAGCGGCTTCATAA  >  NC_000913/3197098‑3197284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`