Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 593 264.2 13311096 97.8% 13018251 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,177,426 T→C intergenic (+265/‑148) rplA → / → rplJ 50S ribosomal subunit protein L1/50S ribosomal subunit protein L10

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,177,4260TC100.0% 1105.3 / NA 297intergenic (+265/‑148)rplA/rplJ50S ribosomal subunit protein L1/50S ribosomal subunit protein L10
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (147/150);  total (147/150)

Only 100 of 309 total aligned reads displayed.

GAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTT  >  NC_000913/4177336‑4177515
                                                                                          |                                                                                         
gAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAAccc                                                                                         <  1:409057/93‑1 (MQ=255)
 aaTAGGGACGGATAGAAAAAATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAAcccc                                                                                        <  2:510988/93‑1 (MQ=255)
 aaTAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAAcccc                                                                                        <  2:3454263/93‑1 (MQ=255)
  aTAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACcccc                                                                                       <  2:1121013/93‑1 (MQ=255)
   tAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCt                                                                                      >  1:5127398/1‑93 (MQ=255)
   tAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCt                                                                                      >  1:4182069/1‑93 (MQ=255)
     gCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGc                                                                                    >  2:913879/1‑93 (MQ=255)
     gCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGc                                                                                    <  1:967996/93‑1 (MQ=255)
      cGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCg                                                                                   >  2:5434581/1‑93 (MQ=255)
      cGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCg                                                                                   >  2:2762029/1‑93 (MQ=255)
       gACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGt                                                                                  <  1:628781/93‑1 (MQ=255)
       gACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGt                                                                                  >  2:639707/1‑93 (MQ=255)
       gACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGt                                                                                  <  1:4780168/93‑1 (MQ=255)
          ggATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGa                                                                               >  1:1021547/1‑93 (MQ=255)
           gATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGAc                                                                              <  2:2267121/93‑1 (MQ=255)
           gATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGAc                                                                              >  2:2176845/1‑93 (MQ=255)
           gATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGAc                                                                              <  2:1641202/93‑1 (MQ=255)
            aTAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACg                                                                             >  1:4585875/1‑93 (MQ=255)
            aTAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACg                                                                             >  2:5607920/1‑93 (MQ=255)
             tAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACgg                                                                            <  2:4640920/93‑1 (MQ=255)
              aGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGt                                                                           <  2:1402229/93‑1 (MQ=255)
               gAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTg                                                                          >  1:1988378/1‑93 (MQ=255)
               gAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTg                                                                          >  2:1331860/1‑93 (MQ=255)
                aaaaGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGa                                                                         <  1:3540729/93‑1 (MQ=255)
                aaaaGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGa                                                                         <  2:4501905/93‑1 (MQ=255)
                  aaGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACa                                                                       >  2:1731123/1‑93 (MQ=255)
                   aGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAg                                                                      >  1:634787/1‑93 (MQ=255)
                   aGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAg                                                                      <  2:2108744/93‑1 (MQ=255)
                     aTTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGaa                                                                    <  1:2302416/93‑1 (MQ=255)
                     aTTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGaa                                                                    <  2:3376020/93‑1 (MQ=255)
                     aTTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGaa                                                                    <  1:2622791/93‑1 (MQ=255)
                      tttGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAAc                                                                   >  1:239760/1‑93 (MQ=255)
                      tttCTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAAc                                                                   <  1:6399473/93‑1 (MQ=255)
                        tGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGc                                                                 <  1:1575075/93‑1 (MQ=255)
                        tGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGc                                                                 <  2:6087919/93‑1 (MQ=255)
                         gTTCGTTGGAGCCTGGCCTCTCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCt                                                                >  1:6494728/1‑93 (MQ=255)
                         gTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCt                                                                >  1:1188141/1‑93 (MQ=255)
                         gTTCGTTGGAGCCTGGCCTATCCAGCCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCt                                                                <  1:3343789/93‑1 (MQ=255)
                          ttCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTa                                                               >  2:3907895/1‑93 (MQ=255)
                          ttCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTa                                                               >  1:2972456/1‑93 (MQ=255)
                           tCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTaa                                                              <  1:1307766/93‑1 (MQ=255)
                           tCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTaa                                                              <  1:5560211/93‑1 (MQ=255)
                            cGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAg                                                             >  1:2812520/1‑93 (MQ=255)
                             gTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGa                                                            >  2:5354832/1‑93 (MQ=255)
                               tGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGatt                                                          <  1:3783601/93‑1 (MQ=255)
                                 gAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGattat                                                        >  2:58627/1‑93 (MQ=255)
                                 gAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGattat                                                        >  2:2244283/1‑93 (MQ=255)
                                 gAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGattat                                                        >  2:1206136/1‑93 (MQ=255)
                                  aGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGattatt                                                       >  1:5211008/1‑93 (MQ=255)
                                    ccTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCt                                                     <  2:2852819/93‑1 (MQ=255)
                                    ccTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCt                                                     >  2:4400756/1‑93 (MQ=255)
                                    ccTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCt                                                     <  1:3702003/93‑1 (MQ=255)
                                      tGGCCTATCCAGGCGTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTACCCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCttt                                                   <  1:4328277/93‑1 (MQ=255)
                                      tGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTCAGATTATTCttt                                                   >  1:2882986/1‑93 (MQ=255)
                                      tGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCttt                                                   >  2:2635574/1‑93 (MQ=255)
                                       ggCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCtttt                                                  <  1:1474729/93‑1 (MQ=255)
                                       ggCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCtttt                                                  <  1:2577404/93‑1 (MQ=255)
                                        gCCTATCCTGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTta                                                 <  2:741760/93‑1 (MQ=255)
                                        gCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTta                                                 <  1:1882823/93‑1 (MQ=255)
                                          cTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACTCTAAGAGTATTCTTTtata                                               >  1:3299525/1‑93 (MQ=255)
                                           tATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTatat                                              >  1:6596735/1‑93 (MQ=255)
                                            aTCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATAtt                                             <  1:246242/93‑1 (MQ=255)
                                              ccAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCt                                           <  1:6114648/93‑1 (MQ=255)
                                               cAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTg                                          <  2:4172736/93‑1 (MQ=255)
                                               cAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTg                                          <  1:1517315/93‑1 (MQ=255)
                                                  gCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCt                                       <  2:4082991/93‑1 (MQ=255)
                                                   ccTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCtt                                      >  2:233875/1‑93 (MQ=255)
                                                    cTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTg                                     >  2:3194730/1‑93 (MQ=255)
                                                     tCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGt                                    <  1:3179900/93‑1 (MQ=255)
                                                        gTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTc                                 >  1:1780521/1‑93 (MQ=255)
                                                         tCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCt                                >  1:578343/1‑93 (MQ=255)
                                                           gAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGc                              <  1:4430978/93‑1 (MQ=255)
                                                            aaGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCt                             >  1:5046055/1‑93 (MQ=255)
                                                             aGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTTGCTTGTTTTTtctc                            >  1:4682220/1‑93 (MQ=255)
                                                             aGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTc                            >  2:1441882/1‑93 (MQ=255)
                                                              gACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCa                           >  2:1980625/1‑93 (MQ=255)
                                                               aCCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCAc                          >  1:5483910/1‑93 (MQ=255)
                                                                ccGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCAcc                         <  2:1577975/93‑1 (MQ=255)
                                                                ccGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCAcc                         >  2:5527904/1‑93 (MQ=255)
                                                                   cAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTa                      >  1:4725389/1‑93 (MQ=255)
                                                                   cAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGGTTCTGCTCACCGTa                      >  2:5004142/1‑93 (MQ=255)
                                                                    aGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTaa                     >  2:4312216/1‑93 (MQ=255)
                                                                    aGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTaa                     >  2:310015/1‑93 (MQ=255)
                                                                    aGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTaa                     >  2:4808644/1‑93 (MQ=255)
                                                                    aGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTaa                     >  1:4533604/1‑93 (MQ=255)
                                                                     ggAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAAt                    >  1:3129257/1‑93 (MQ=255)
                                                                      gAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAAtt                   <  2:6277430/93‑1 (MQ=255)
                                                                        gTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTaa                 >  2:2565221/1‑93 (MQ=255)
                                                                             gCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGc            >  2:3616373/1‑93 (MQ=255)
                                                                             gCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGc            <  2:1903863/93‑1 (MQ=255)
                                                                             gCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGc            <  2:5297511/93‑1 (MQ=255)
                                                                             gCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGc            <  1:6187861/93‑1 (MQ=255)
                                                                               aaGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGctc          <  2:3337168/93‑1 (MQ=255)
                                                                                aGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGctct         >  1:3951676/1‑93 (MQ=255)
                                                                                  aaaCTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGctctct       <  2:2901667/93‑1 (MQ=255)
                                                                                   aaCTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCtctctc      <  2:5205877/93‑1 (MQ=255)
                                                                                    aCTTAACCCCCTGGCTAGACGGTGACAGAACGCTAAGGTTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTcc     <  2:1773861/93‑1 (MQ=255)
                                                                                    aCTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTcc     >  2:4960337/1‑93 (MQ=255)
                                                                                      ttAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGt   <  1:5442897/93‑1 (MQ=255)
                                                                                       tAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGtt  >  2:6481319/1‑93 (MQ=255)
                                                                                          |                                                                                         
GAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTT  >  NC_000913/4177336‑4177515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGA  >  NC_000913/4177335‑4177519
                                                                                           |                                                                                             
TGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCC                                                                                             >  SRR4302547.2503328/1‑94 (MQ=60)
TGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCC                                                                                             <  SRR4302547.5050077/94‑1 (MQ=60)
 GAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCC                                                                                            <  SRR4302547.416642/94‑1 (MQ=60)
  AATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCC                                                                                           <  SRR4302547.6147534/94‑1 (MQ=60)
   ATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCT                                                                                          >  SRR4302547.4267295/1‑94 (MQ=60)
   ATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCT                                                                                          >  SRR4302547.5233051/1‑94 (MQ=60)
   ATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCT                                                                                          <  SRR4302547.3750813/94‑1 (MQ=60)
    TAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTG                                                                                         >  SRR4302547.2619892/1‑94 (MQ=60)
     AGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGC                                                                                        >  SRR4302547.6306839/1‑94 (MQ=60)
     AGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGATTCGCAAGAAACTTAACACCCTGC                                                                                        >  SRR4302547.2876350/1‑94 (MQ=60)
      GCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCG                                                                                       <  SRR4302547.986787/94‑1 (MQ=60)
      GCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCG                                                                                       <  SRR4302547.4254489/94‑1 (MQ=60)
      GCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCG                                                                                       <  SRR4302547.3419949/94‑1 (MQ=60)
      GCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCG                                                                                       >  SRR4302547.6082873/1‑94 (MQ=60)
       CGACGGATAGACAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGCTTCGCAAGAAACTTAACCCCCTGCGT                                                                                      >  SRR4302547.1574785/1‑94 (MQ=60)
       CGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGT                                                                                      >  SRR4302547.521998/1‑94 (MQ=60)
        GACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTA                                                                                     <  SRR4302547.4879179/94‑1 (MQ=60)
        GACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTA                                                                                     <  SRR4302547.640387/94‑1 (MQ=60)
        GACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTA                                                                                     <  SRR4302547.2632299/94‑1 (MQ=60)
          CGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGA                                                                                   >  SRR4302547.1041573/1‑94 (MQ=60)
          CGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGA                                                                                   >  SRR4302547.558746/1‑94 (MQ=60)
            GATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACG                                                                                 >  SRR4302547.1941527/1‑94 (MQ=60)
            GATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACG                                                                                 >  SRR4302547.4680780/1‑94 (MQ=60)
            GATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACG                                                                                 <  SRR4302547.4857935/94‑1 (MQ=60)
              TAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGT                                                                               >  SRR4302547.2796167/1‑94 (MQ=60)
               AGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTG                                                                              >  SRR4302547.2027859/1‑94 (MQ=60)
               AGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTG                                                                              >  SRR4302547.1299221/1‑94 (MQ=60)
                 AAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGAC                                                                            <  SRR4302547.3613010/94‑1 (MQ=60)
                   AAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAG                                                                          <  SRR4302547.6379992/94‑1 (MQ=60)
                   AAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAG                                                                          >  SRR4302547.646507/1‑94 (MQ=60)
                      ATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAAC                                                                       <  SRR4302547.2675624/94‑1 (MQ=60)
                      ATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAAC                                                                       <  SRR4302547.2982183/94‑1 (MQ=60)
                      ATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAAC                                                                       >  SRR4302547.5101364/1‑94 (MQ=60)
                      ATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAAC                                                                       >  SRR4302547.244247/1‑94 (MQ=60)
                      ATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAAC                                                                       <  SRR4302547.1164860/94‑1 (MQ=60)
                      ATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAAC                                                                       <  SRR4302547.2349075/94‑1 (MQ=60)
                      ATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAAC                                                                       <  SRR4302547.1221944/94‑1 (MQ=60)
                       TTTCTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACG                                                                      <  SRR4302547.6532963/94‑1 (MQ=60)
                        TTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGC                                                                     <  SRR4302547.4150096/94‑1 (MQ=60)
                        TTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGC                                                                     >  SRR4302547.1534045/1‑94 (MQ=60)
                         TGTTCGTTGGAGCCTGGCCTCTCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCT                                                                    >  SRR4302547.6629926/1‑94 (MQ=60)
                         TGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCT                                                                    >  SRR4302547.6528793/1‑94 (MQ=60)
                         TGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCT                                                                    >  SRR4302547.1212132/1‑94 (MQ=60)
                         TGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCT                                                                    <  SRR4302547.1606421/94‑1 (MQ=60)
                         TGTTCGTCGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTACCCCCCTGCGTAGACGGTGACAGAACGCT                                                                    <  SRR4302547.5285544/94‑1 (MQ=60)
                          GTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTA                                                                   >  SRR4302547.3031609/1‑94 (MQ=60)
                          GTTCGTTGGAGCCTGGCCTATCCAGCCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTA                                                                   <  SRR4302547.3411476/94‑1 (MQ=60)
                            TCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAG                                                                 <  SRR4302547.5674896/94‑1 (MQ=60)
                            TCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAG                                                                 >  SRR4302547.2868789/1‑94 (MQ=60)
                            TCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAG                                                                 <  SRR4302547.1334064/94‑1 (MQ=60)
                             CGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGA                                                                <  SRR4302547.2887476/94‑1 (MQ=60)
                              GTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGAT                                                               >  SRR4302547.4427516/1‑94 (MQ=60)
                              GTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGAT                                                               <  SRR4302547.6401770/94‑1 (MQ=60)
                               TTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATT                                                              <  SRR4302547.2499370/94‑1 (MQ=60)
                                TGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTA                                                             >  SRR4302547.2620116/1‑94 (MQ=60)
                                TGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTA                                                             <  SRR4302547.3860748/94‑1 (MQ=60)
                                TGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTA                                                             >  SRR4302547.4415305/1‑94 (MQ=60)
                                 GGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTAT                                                            >  SRR4302547.369189/1‑94 (MQ=60)
                                 GGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTAT                                                            <  SRR4302547.4755906/94‑1 (MQ=60)
                                  GAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATT                                                           >  SRR4302547.5318257/1‑94 (MQ=60)
                                  GAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATT                                                           >  SRR4302547.110088/1‑94 (MQ=60)
                                  GAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATT                                                           <  SRR4302547.2353822/94‑1 (MQ=60)
                                  GAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATT                                                           <  SRR4302547.1542750/94‑1 (MQ=60)
                                   AGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTC                                                          <  SRR4302547.1868978/94‑1 (MQ=60)
                                   AGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTC                                                          <  SRR4302547.1789644/94‑1 (MQ=60)
                                   AGCCTGGCCTATCCAGGCCTCCGGCGAAGACCCCAGGAGGTTCGCCAGGAACTTAAACCCCTGCcgcgaagggggccgaacgcgcaaaatattt                                                          >  SRR4302547.4957255/1‑64 (MQ=32)
                                    GCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGGCAGAACGCTACGATTATTCT                                                         <  SRR4302547.6583822/94‑1 (MQ=60)
                                    GCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCT                                                         <  SRR4302547.4802839/94‑1 (MQ=60)
                                     CCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTT                                                        <  SRR4302547.3777567/94‑1 (MQ=60)
                                     CCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTT                                                        <  SRR4302547.3110753/94‑1 (MQ=60)
                                     CCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTT                                                        <  SRR4302547.2656272/94‑1 (MQ=60)
                                      CTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTCAGATTATTCTTT                                                       >  SRR4302547.2940528/1‑94 (MQ=60)
                                      CTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTT                                                       <  SRR4302547.3230623/94‑1 (MQ=60)
                                      CTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTT                                                       <  SRR4302547.3232776/94‑1 (MQ=60)
                                      CTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTT                                                       >  SRR4302547.2197774/1‑94 (MQ=60)
                                      ATGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTT                                                       >  SRR4302547.6770978/1‑94 (MQ=60)
                                       TGGCCTATCCAGGCGTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTACCCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTT                                                      <  SRR4302547.4417355/94‑1 (MQ=60)
                                       TGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTT                                                      >  SRR4302547.6460122/1‑94 (MQ=60)
                                       TGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTT                                                      <  SRR4302547.3278730/94‑1 (MQ=60)
                                       TGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTT                                                      >  SRR4302547.5705755/1‑94 (MQ=60)
                                        GGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTA                                                     <  SRR4302547.2629419/94‑1 (MQ=60)
                                        GGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTA                                                     <  SRR4302547.4626832/94‑1 (MQ=60)
                                        GGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTA                                                     >  SRR4302547.3039386/1‑94 (MQ=60)
                                        GGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTA                                                     <  SRR4302547.6490048/94‑1 (MQ=60)
                                        GGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTA                                                     <  SRR4302547.1504189/94‑1 (MQ=60)
                                         GCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTAT                                                    <  SRR4302547.1920016/94‑1 (MQ=60)
                                         GCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTAT                                                    <  SRR4302547.5762439/94‑1 (MQ=60)
                                          CCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACTCTAAGAGTATTCTTTTATA                                                   >  SRR4302547.3365930/1‑94 (MQ=60)
                                          CCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATA                                                   <  SRR4302547.2698864/94‑1 (MQ=60)
                                           CTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATAT                                                  >  SRR4302547.6639165/1‑94 (MQ=60)
                                           CTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATAT                                                  >  SRR4302547.6734068/1‑94 (MQ=60)
                                            TATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATT                                                 <  SRR4302547.2152236/94‑1 (MQ=60)
                                            TATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATT                                                 >  SRR4302547.3369680/1‑94 (MQ=60)
                                             ATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTC                                                <  SRR4302547.6430881/94‑1 (MQ=60)
                                             ATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTC                                                <  SRR4302547.250840/94‑1 (MQ=60)
                                             ATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTC                                                <  SRR4302547.5007663/94‑1 (MQ=60)
                                              TCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCT                                               <  SRR4302547.1338359/94‑1 (MQ=60)
                                               CCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTG                                              <  SRR4302547.1729135/94‑1 (MQ=60)
                                               CCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTG                                              <  SRR4302547.6241491/94‑1 (MQ=60)
                                                CAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGG                                             <  SRR4302547.4646191/94‑1 (MQ=60)
                                                CAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGG                                             <  SRR4302547.6491248/94‑1 (MQ=60)
                                                CAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGG                                             <  SRR4302547.1547541/94‑1 (MQ=60)
                                                CAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGG                                             <  SRR4302547.5508951/94‑1 (MQ=60)
                                                 AGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGC                                            >  SRR4302547.4147607/1‑94 (MQ=60)
                                                 AGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGC                                            >  SRR4302547.3316157/1‑94 (MQ=60)
                                                 AGGCCTCCGTCCAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGC                                            <  SRR4302547.187069/94‑1 (MQ=60)
                                                      TCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTT                                       <  SRR4302547.3243279/94‑1 (MQ=60)
                                                       CCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTT                                      <  SRR4302547.6693105/94‑1 (MQ=60)
                                                       CCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTT                                      <  SRR4302547.298392/94‑1 (MQ=60)
                                                        CGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTC                                     >  SRR4302547.1815806/1‑94 (MQ=60)
                                                        CGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTC                                     <  SRR4302547.5341621/94‑1 (MQ=60)
                                                        CGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTC                                     <  SRR4302547.3517532/94‑1 (MQ=60)
                                                         GTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCT                                    >  SRR4302547.588710/1‑94 (MQ=60)
                                                         GTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCT                                    >  SRR4302547.5569826/1‑94 (MQ=60)
                                                         GTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCT                                    <  SRR4302547.3383310/94‑1 (MQ=60)
                                                          TCGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTG                                   <  SRR4302547.4744756/94‑1 (MQ=60)
                                                           CGAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGC                                  >  SRR4302547.3790383/1‑94 (MQ=60)
                                                            GAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCT                                 >  SRR4302547.5150243/1‑94 (MQ=60)
                                                            GAAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCT                                 <  SRR4302547.4522563/94‑1 (MQ=60)
                                                             AAGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTTGCTTGTTTTTTCTC                                >  SRR4302547.4779208/1‑94 (MQ=60)
                                                              AGACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCA                               >  SRR4302547.4541543/1‑94 (MQ=60)
                                                               GACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCAC                              >  SRR4302547.5597151/1‑94 (MQ=60)
                                                               GACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCAC                              <  SRR4302547.2434527/94‑1 (MQ=60)
                                                                ACCGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACC                             >  SRR4302547.3798897/1‑94 (MQ=60)
                                                                  CGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGT                           <  SRR4302547.4216549/94‑1 (MQ=60)
                                                                  CGCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGT                           >  SRR4302547.3821805/1‑94 (MQ=60)
                                                                   GCAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTA                          >  SRR4302547.4823287/1‑94 (MQ=60)
                                                                    CAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAA                         >  SRR4302547.5077693/1‑94 (MQ=60)
                                                                    CAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAA                         >  SRR4302547.4627300/1‑94 (MQ=60)
                                                                    CAGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTATTTTATATTCTGGCTTGTTTCTGCTCACCGTAA                         >  SRR4302547.6295375/1‑94 (MQ=60)
                                                                     AGGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAAT                        >  SRR4302547.3191353/1‑94 (MQ=60)
                                                                      GGAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATT                       >  SRR4302547.5583084/1‑94 (MQ=60)
                                                                       GAGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTA                      >  SRR4302547.4791540/1‑94 (MQ=60)
                                                                        AGTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAA                     >  SRR4302547.1466792/1‑94 (MQ=60)
                                                                        AGTGTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAA                     <  SRR4302547.5213842/94‑1 (MQ=60)
                                                                         GTTTCGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAG                    >  SRR4302547.524177/1‑94 (MQ=60)
                                                                             CGCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGC                <  SRR4302547.815999/94‑1 (MQ=60)
                                                                              GCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCT               <  SRR4302547.2614114/94‑1 (MQ=60)
                                                                              GCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCT               <  SRR4302547.447144/94‑1 (MQ=60)
                                                                              GCAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCT               <  SRR4302547.6316299/94‑1 (MQ=60)
                                                                               CAAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTC              >  SRR4302547.4646111/1‑94 (MQ=60)
                                                                                AAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCT             >  SRR4302547.1588153/1‑94 (MQ=60)
                                                                                AAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCT             <  SRR4302547.3879457/94‑1 (MQ=60)
                                                                                AAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCT             >  SRR4302547.4028045/1‑94 (MQ=60)
                                                                                AAGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCT             >  SRR4302547.4032045/1‑94 (MQ=60)
                                                                                 AGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTC            >  SRR4302547.1953081/1‑94 (MQ=60)
                                                                                 AGAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTC            >  SRR4302547.4841930/1‑94 (MQ=60)
                                                                                  GAAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCTCCGTAATTAAGACGCTCTCT           <  SRR4302547.6597026/94‑1 (MQ=60)
                                                                                   AAACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTC          >  SRR4302547.1835979/1‑94 (MQ=60)
                                                                                     ACTTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCG        <  SRR4302547.4289458/94‑1 (MQ=60)
                                                                                       TTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTT      >  SRR4302547.5630311/1‑94 (MQ=60)
                                                                                       TTAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTT      <  SRR4302547.5555367/94‑1 (MQ=60)
                                                                                        TAACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTT     >  SRR4302547.2543711/1‑94 (MQ=60)
                                                                                         AACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGTCTTGTTTCTGCTCGCCGTAATTAAGACGCTCTCTCCGTTTG    <  SRR4302547.480265/94‑1 (MQ=60)
                                                                                         AACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTG    >  SRR4302547.3267352/1‑94 (MQ=60)
                                                                                         AACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTG    >  SRR4302547.2035206/1‑94 (MQ=60)
                                                                                          ACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGG   >  SRR4302547.4260546/1‑94 (MQ=60)
                                                                                          ACCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGG   >  SRR4302547.3995983/1‑94 (MQ=60)
                                                                                           CCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTTGA  >  SRR4302547.5185349/1‑94 (MQ=60)
                                                                                           CCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGA  >  SRR4302547.5743813/1‑94 (MQ=60)
                                                                                           |                                                                                             
TGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGA  >  NC_000913/4177335‑4177519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑