Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F13 I0 R1
|
150 |
9496.0 |
7621532 |
98.4% |
7499587 |
136.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,797,497 |
C→G |
15.9% |
S135C (TCT→TGT) |
CIW80_RS19065 → |
LacI family DNA‑binding transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,797,497 | 0 | C | G | 15.9%
| 279.3
/ 13.8
| 119 | S135C (TCT→TGT) | CIW80_RS19065 | LacI family DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (17/74); new base G (16/2); total (43/76) |
| Fisher's exact test for biased strand distribution p-value = 2.05e-08 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 122 total aligned reads displayed.
TGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGACCGAACAT > NZ_CP022686/3797359‑3797636
|
tGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTATTTATTTTTTGGtct > 7:441468/1‑140 (MQ=255)
tCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAGTCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGGTTTTTTTGGTGTTCAggt > 6:328932/1‑138 (MQ=255)
tCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTATTTTTGGTTATCAAtt > 3:375925/1‑140 (MQ=255)
ggtGCAGCAGGTGCGTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTgg < 7:670836/138‑1 (MQ=255)
ttGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGc < 4:506177/140‑1 (MQ=255)
gcagcaGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCATTTGGGTg > 5:935141/1‑140 (MQ=255)
gcagcaGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTATTTTTTGGTGTCAGTTggggg > 6:736309/1‑137 (MQ=255)
cagcagGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGa < 8:80936/140‑1 (MQ=255)
cagcagGTGCTTAATAAAAATGAATTCCAGCTACAGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGa < 6:834745/140‑1 (MQ=255)
gTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGCCGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAAc > 8:71075/1‑140 (MQ=255)
gTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAAACCGGCGGCGTTAGTTTTTTTTTGGTGTAAGGTGGCTGATAATAc > 7:461924/1‑140 (MQ=255)
tGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACt < 7:794423/140‑1 (MQ=255)
tGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACt < 5:564196/140‑1 (MQ=255)
gCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTTTTTTTTTTTGGTGTGAGTTGGCTGCTTAAACta > 5:593666/1‑139 (MQ=255)
taataaAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCAcc < 8:335169/140‑1 (MQ=255)
taataaAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTATTTTTTTTTTGTTATCAATTGGCTGATtaaaaaaacc > 3:298356/1‑134 (MQ=255)
aaaTGAATTCCAGCTACTGCTTGGGTGTCATGTGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGGTTTTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATAc > 2:404433/1‑140 (MQ=255)
aTGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTTTTTTTGTGTGTCAGGTGGCTGGGAAAACTCACCactgaagc > 3:941356/1‑133 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGCGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGCCGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 6:590711/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATACTCAGCTCTAAGAAGCTGAAATTCTGATGTCGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGGTGGATGATAAAACTCACCAGATACTCGAGaa < 8:487053/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 3:803374/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 3:722558/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 3:647637/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 1:227474/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 1:361857/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 2:377851/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 3:122036/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGGCAAGAGAATAATAAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTGATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 3:76052/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGGAATGAGTATAAGCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 5:223270/140‑1 (MQ=255)
ccAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaaaa < 6:348230/140‑1 (MQ=255)
ccAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaaaa < 7:578655/140‑1 (MQ=255)
ccAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaaaa < 8:759229/140‑1 (MQ=255)
ccAGCTACTGCTTGGGTGGCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTGCTTCAAGGCAACCCGGCGGCGTTAGTTATTTATGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaaaa < 4:748312/140‑1 (MQ=255)
cTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACaaa < 3:743438/140‑1 (MQ=255)
cTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACaaa < 4:2878/140‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGAATCTGAAATTCTGATGACGCTTCTTCAAGTCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 3:129917/140‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 7:544441/140‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 7:104434/140‑1 (MQ=255)
gggTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTTTTTTTTGGTATGAGTTTGGGGATAAAAATCACCACATAAACGCGAAAACAAAtataacaaa > 5:170383/1‑135 (MQ=255)
gtCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGtt < 5:75022/140‑1 (MQ=255)
aTGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTTTTTTTTGTTGTGAGTTGGGGGATTAAACTAACCAGAAACACGAGAAAAAAAATATACCTACCggttaa > 1:859729/1‑135 (MQ=255)
aTGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTACTTTATATTGGGTCTCAGTTGGCTGATAAAACTCCCCCGCTAAAACAGAAAACCAAAATACAGACCCTTAAc > 5:760548/1‑140 (MQ=255)
gAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGt < 3:637038/140‑1 (MQ=255)
aGTATAATCAGCTCAATGTAGATGAAATTCTGTTGAGGCTTCTTCAAGGCAACACGGCGGCGTTTGTTTTTTTTGGTTGTCAGTTGGCTGATTAAACTCTCCAGATACTAGAGATAACAAATATACCTACCGTTAACGtt < 6:930162/140‑1 (MQ=255)
tataATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGt < 6:267728/140‑1 (MQ=255)
tataATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTGTCAGTTGGGGGATAAAACTCACCAGAAAAGCGAGAAAAAAAAAATACCTAACGTTTAAGTTGt > 6:662165/1‑140 (MQ=255)
aTCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGt < 7:301920/140‑1 (MQ=255)
aTCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTTTTTTTGGTTCTGAGGTGGCTGATTAAACACACCCGATACTCGAGCAAACAAAAATAACTACCGTTTAAGTTGTGGGt > 5:328098/1‑140 (MQ=255)
tCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTATTTTTGGGTGTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTTACGTTGTCGGtt > 4:795459/1‑140 (MQ=255)
cAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTc < 3:173501/140‑1 (MQ=255)
atcTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAATGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATAATCGATAAAACAAATATACCTACCGTTAACGTTGTCGGTTcc < 1:860789/138‑1 (MQ=255)
aGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTGTTATTTTTGGTTCTCAGTTGGGTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTTTAGGGTcc > 6:408327/1‑140 (MQ=255)
aGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTcc < 6:690456/140‑1 (MQ=255)
aGCTCAAAGAACATTAAATTCTGATGACGATTCTTCCAGGCAACCCGGCGTCGTTAGTTATTTTTGGGTCTCAGTTGTCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTcc < 6:20672/140‑1 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCTAGGCAACCAGGAGGCGGTTGTTATGTTTTGTTCGACTTTGGCGGGTTAAACTCACGAGGTACTCGTGAAAAAACATTAAGCAACCCTTAACGTTTTGGGttggg > 2:401606/1‑137 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTTTTTTTGGGTGTGAGGTGGGGGGTTAAACTCACCAGAGACTAGAGAAAAACAATATACCTACCGGTTACGGTGTAGGTTgcc > 6:575300/1‑140 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 1:534942/117‑1 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTccc > 4:691204/1‑140 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTTTTTTTGTTTCTACGTTTGGGGGTTAAACTCACCAGCTTCTCGAGCAAACAAATATAACAACCGGTATCCTTTGCGGTTcgc > 3:655411/1‑138 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTTTTTTTTGGTATGAGTTGGCTGTTAAAACACCCCAGATAAGCGAGAAAAAAAAAATAACGAACGTTAACGTTGTCgggtgcc > 8:29566/1‑135 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGGTATTTTTTGGTGTCAGTTGGGGGATAAAACACAACACCTACTCGAGAAAAAAAATATAACTAACGGTAAAGTAGTCGGGTccc > 8:804957/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGTGTTTGTTATTTTTTGGTGTGAGTTGGCTGATTAAAATGACCAGATTCTCCAGAAAACAAATATAACTACCCGTTACGTTGTGGGttgacc > 3:481140/1‑136 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTGATTTTTGGTTATCAGTTGGCTGATAAAAATCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGGTGTGGGTTaccc > 2:583994/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGGTATTTTTGGTTATCAGTTGGCTGATAAAACTCACCAGATAAGAGAGAAAAAAAATATAACATACGTTAACGGTGTAGGTTcacc > 2:579397/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTGTTATTTTTGGTTCTCAGTTGGGGGATAAAACAGCCCCGCTACTCGAGAAAACAAATATACCTACCGTTAACGTTGTGGGGTcccc > 5:111262/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGGTATTTTTGGGTATGAGGTGGCGGGTAAAACTCACCCGCTACACGAGAAAACAAAAATTCCGTCCGGTTAAGTGGTCGGGTgccc > 8:769218/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGGTGTTTTTTTTGGGTGTGAGTTGGGGGGTAAAACTCACCCGCTACACGAGAAAACCAATATAACAACCGGTAACGTTGTGGGTTgccc > 4:154763/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGGTGTTTTTTTTGGGTGGGTGTTGGCTGAGAAAACTCCCCCGCTTATCGGGTAAACAAATAAAACGACCGGGTAAGTTGTGGGTTgccc > 7:356713/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGGTGTTTTTTTTGGGGGTCAGTTGGCGGATTAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGGTTACGTTGTCGGGTgccc > 2:869048/1‑140 (MQ=255)
aaaGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGAGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCttt < 5:267222/140‑1 (MQ=255)
agCTGAAATTCTGATGACGCTTCTTCAATGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTc < 3:729610/140‑1 (MQ=255)
gCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTGATTTTTGGTTCTGAGTTTGCTGATAAAACTGACCAGCTTCTCGAGAAAACAAATATTCCTACCCGTTACGTTGTCGGTTCCCCTTTCAGtac > 8:148856/1‑138 (MQ=255)
cTGAAATTCTGATGCCGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTATTTTTGGTTCTGAGTTGGCGGATAAAACGCCCCAGATACTCGAGTAAACCAATATTCCTAACGTTAACGGTGTCGGTTGCCCGTTCAgggcg > 6:534455/1‑136 (MQ=255)
tGAAATTCTGATGACGCTTCTTCAAGGGAACCCGGCGGAGTTAGTTATTTTTGGTTCTCAGTAGGCTTATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCTGTTCCCCTTTAAGTCCgg < 2:647897/140‑1 (MQ=255)
gAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTAGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATCCCTACCGTAAACGTTGGCGGTTCCCCTTTCAGTCCGGc < 4:45307/140‑1 (MQ=255)
aaaTTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGCTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCt < 5:476365/140‑1 (MQ=255)
tgatgaCGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAAtt < 2:392779/140‑1 (MQ=255)
ttcttcAAGGCAACCCGGCGGCGTTTTTTTTTTTTTGTTCTCAGTTGGCTGATAAAACTCCCCAGATACACGAGAAAACAAATATACCTAACCTTAACGTTGTCGGTTAGCCGTTAAGTACGGGACAAAATAACaaagaa > 8:443850/1‑135 (MQ=255)
tcttcAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGGTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGaaa < 4:54386/140‑1 (MQ=255)
ttcAAGGCAACCCGGCGGCGTTATTTATTTTTTGTTTTCAGTTTGCTGATAAAACTACACAGATAATAGAGAAAACAAATATACCTACCGTTTAAGTTTTATGGTCACCTTTAAGTCCGGCGAAAAATACAATAAAAACa > 2:574584/1‑140 (MQ=255)
cacggcggCGTTAGTTATTTTTGGTTGTCAGTTGGCGGATAAAACTCACCAGATACTCGAGAAAACAAATATACCAACCCTTAACGGTGTGGGTTCCCCGTTCAGTCCGGCGCAAATTTCCCTAGAAACAGCAttttttt > 8:196913/3‑139 (MQ=255)
cacggcggCGTTAGTTATTTTTGGTTCTCATTTGGCTGATTAAACTCACCAGCTACACGAGAAAACAAATATACCTACCGTTAAAGTTGTAGGGTCCCCATTCAGACCGGCTCAAATTAACATCGAAACAGCATTTTTTg > 8:192391/3‑140 (MQ=255)
ccGGCGGCGTTAGTTATTTTTGGTTCTCAGGTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGa < 8:678576/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTTGTTCTCAGTTGGCTGATAAATCTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTGGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 5:734898/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCTGTTGGCTGATAAATCTCACCAGATACTCGAGAAAACAAATCTACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 3:828298/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAACCAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 5:560402/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTACCGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 8:390035/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCTGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 4:699725/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 5:472547/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGGTGGCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 3:916460/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGATGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAga < 1:96628/140‑2 (MQ=255)
gcggcgGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 8:303586/140‑1 (MQ=255)
gcggcgGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 1:136/140‑1 (MQ=255)
ggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCTCCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCATTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCAt < 1:261903/140‑1 (MQ=255)
ggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCAt < 1:372347/140‑1 (MQ=255)
ggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCAt < 5:731136/140‑1 (MQ=255)
ggTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGACCGa < 8:640675/140‑1 (MQ=255)
ggTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGACCGa < 4:332058/140‑1 (MQ=255)
tctcAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGACCGAACa < 1:406846/140‑1 (MQ=255)
ctcAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGACCGAACAt > 8:512146/1‑140 (MQ=255)
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TGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACATAAACTGACCGAACAT > NZ_CP022686/3797359‑3797636
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
