Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F13 I0 R1
|
230 |
5035.0 |
9125430 |
98.4% |
8979423 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,806,256 |
G→T |
16.7% |
E1583* (GAA→TAA) |
cdiA → |
contact‑dependent inhibition effector tRNA nuclease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,806,256 | 0 | G | T | 16.7%
| 468.6
/ 22.9
| 274 | E1583* (GAA→TAA) | cdiA | contact‑dependent inhibition effector tRNA nuclease |
| Reads supporting (aligned to +/- strand): ref base G (125/80); new base T (2/54); total (127/147) |
| Fisher's exact test for biased strand distribution p-value = 3.58e-16 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 286 total aligned reads displayed.
GACAGAGAATGAATATCTGGTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCGGTGGTCTCTGCAC > NZ_CP022686/3806117‑3806394
|
gACAGAGAATGAATATCTGGTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCggg < 5:1105861/140‑1 (MQ=255)
aCAGAGAATGAATATCTGGTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGa > 1:87949/1‑140 (MQ=255)
gagaATGAATATCTGGTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGTGaaaa < 6:989799/140‑1 (MQ=255)
agaATGAATATCTGGTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGaaaaa > 3:656568/1‑140 (MQ=255)
aatgaatATCTGGTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGCTTTTCACTGGATGGCCGGGAAAAAGa > 1:451561/1‑140 (MQ=255)
taatATCTGGTATACGGCTACGACCCGAAACCGTTTTACGGTAGCTATGCAACAGGGTCTATGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCAGTGGATGGCGGGTAAAAAGATTa < 4:14655/139‑1 (MQ=255)
aatATCTGGTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGAtt > 8:387799/1‑138 (MQ=255)
tCTGGTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGc > 1:15966/1‑140 (MQ=255)
tCTGGTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGc > 1:789431/1‑140 (MQ=255)
tCTGGTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGAAAAACTGCCCCTGCTGTAACCGGAATTTGAAAACAATACCATC‑AGATTTTCACAGGATGGCCGGGAAAAAGATTACACGc > 5:643002/1‑140 (MQ=255)
cTGGTATACCGCTCCGCCCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGTATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGTAAAAAGATTACACGcc < 4:432660/140‑1 (MQ=255)
tGGTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGccc > 4:780025/1‑140 (MQ=255)
ggTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGTAATTTTAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCg < 2:670304/140‑1 (MQ=255)
gctatcCCGCTACGACCCCAAAACTTTTAACGGTAGATATGAAACGGGCTCTCTGTATAAACGGCCCCTTCTGTCCCCGTATTTTTAAAACAATACCATC‑TGATTTTCACTGGATGGCCGTTAAAAAGATTACACGCCCg < 6:318406/138‑1 (MQ=255)
tataCCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTCAAAAAAATACCATC‑AGATTTTCCCTGGATGGCCGGGAAAAAGATTACACGCCCGGt < 6:604985/140‑1 (MQ=255)
aataCCTCTACGACCCCAAAACGTTTTACTGTAGCTATGCAAAAGGTTATCTGGATAAACTGCCCATTCTGTCACCTTAATTTTAAAACAAAACCATC‑ATATTTTCACTGGATGGCCGGGAAAAATATTACACGCCCGGt < 2:485332/139‑1 (MQ=255)
ataCCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTTTATACAATACCATC‑AGATTTTCACTGGATGGACGGGAAAAAGAATACACGCCCGGtt > 1:85230/1‑139 (MQ=255)
taCCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTaa > 1:107230/1‑140 (MQ=255)
aCCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCAGGGAAAAAGATTACACGCCCGGTAAg > 6:561633/1‑140 (MQ=255)
cTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGt > 3:694356/1‑140 (MQ=255)
cTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGt > 3:1150429/1‑140 (MQ=255)
cTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGt > 5:894683/1‑140 (MQ=255)
cTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACAATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGt > 2:1185701/1‑140 (MQ=255)
accGACCCGAAAACGTTTTACGGTAGCTATCCAACAGGGTCGCTGTATAAACGGCCCCTGCTGGCACCGTAATTTTAAAAAAAACCCATC‑ATATTTTCACTGGAGGGCCGGTAAAAAGATTACACGCCCGGTAAGACGta < 6:17880/138‑1 (MQ=255)
aCGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGATAAAGATTACACGCCCGGTAAGACGtat > 2:1010531/1‑140 (MQ=255)
aCGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGt > 8:195482/1‑138 (MQ=255)
aCGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGACACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGtat > 6:47806/1‑140 (MQ=255)
aCCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGtatt > 8:306960/1‑138 (MQ=255)
caaaaCGTTTTACGGTAGCTATGCAACAGGCTCTCTGTATAAACTGCCCCTGCTGTCACCGTAATTTGAAAAAAATACCATC‑AGATTTTCACTGTTTGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTc < 8:549240/137‑1 (MQ=255)
cGTTGTCCGGTAGCTATGCACCCGGCTCTGTGGCTATACGGCCCCTGCTGTCTCCGGTATTTCAACACAAAACCCGC‑AGATTTTCAGTGGATGCCCGGCAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTAtt < 2:937866/140‑1 (MQ=255)
tACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAg > 7:661058/1‑138 (MQ=255)
ggTCGCTATGCAACAGGCGCTCTGCATAAACTGCCCCGGGTGCCCCCGTAATTTGAAAACAATCCCATC‑AGATTTTCACGGCAGGGCCGGGAAAAAGATTCCACGCCCGGTAAGACGTATTATTCCGTTATTCAggcg < 8:1068717/138‑1 (MQ=255)
ggTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCAAC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAggcggg < 4:1113844/140‑1 (MQ=255)
tAGCTATGCAACAGGCTCTCGGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACCATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTAAggcgggcg > 4:208010/1‑140 (MQ=255)
gCTATGCAACAGGCTCTCTTGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGTGAAAAAGATTACACGCCCGTTAAGACTTATTATTCCGTTATTCAGGcgggcggg > 6:592274/1‑140 (MQ=255)
gCTATGCAACAGGCGCTCTGGATAAACTGCCCCTGCTGTCCCCGGAATTT‑AAAACAATACCACC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTCCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCgggg < 4:345382/140‑1 (MQ=255)
ctagccAACAGGCTCTCTGGATAAACTGCCCCTGCTGCCACCGGAATTTCAAAACAAAACCATC‑ATATTTTCCCTGGATGGCCGGGAAAACGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCgggg < 2:862306/135‑1 (MQ=255)
cTATGACACAGGCTCTCTGGATAAACTGCCCCGGCTGTCACGGGAATTTTAAAACAATACCATC‑AGATTTTCACTGTATGGCCGGGAAAAAGATTACACGCCCGTTAAGACGTATTATTCCGTTATTCAGGCGTGCgggg < 1:717234/140‑1 (MQ=255)
cTATCCAACCGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGTATTTTTAAAAAAAAACCATC‑ATATTTTAACTGGCGGGCCTGAAAAAATATTCCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCgggg < 5:299833/140‑1 (MQ=255)
aCAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTaa > 3:1071658/1‑140 (MQ=255)
gCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGAcc > 5:435226/1‑140 (MQ=255)
tctctGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGAcc > 8:936067/1‑138 (MQ=255)
ctGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGttt > 3:151023/1‑140 (MQ=255)
ggATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGttt > 8:419525/1‑138 (MQ=255)
tAAACTGCCCCTGCTGTCACCGGAATTTTAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGTAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACca < 2:34455/140‑1 (MQ=255)
acaCTGCCCCTGATGTCACCGTAATTTCAAAAAAATACAATA‑AGATTTTCACTGTATGGCCGTGAAAACTTTAAGACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACcag < 3:234837/138‑1 (MQ=255)
aacgtcccccTGCTCCCCCCGTAATTTTAAAAAAAACCCATC‑ATATTTTCCCTGCCGGGCCGATAAAAAGATTCCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACcag < 3:509336/134‑1 (MQ=255)
aaaCTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACcag > 1:86968/1‑140 (MQ=255)
attGCCCGTGGTGTCACCGGATTTTTTAAAATTTACCTTC‑TGATTTTCTCTGTCTGGCCGTTAAAATGATTCCACGCCCGGTAAGACGTATTATTCCGTTATTCTGGCGGGCGGGGATGTTAAGACCCGTTTTACcagca < 2:1169165/138‑1 (MQ=255)
aCTGCCCCTGCTGTCACCGGAATTTGAAAACAATACAATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCACGGTAAGACTTATTATTACGTTATTCAGGCGGGCGTGGATGATAAGACCCGTTTTACcag > 7:720078/1‑138 (MQ=255)
cTGCCCCTGCTGTCACCGGAAGTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAACGATTACACGCCCGGTAAGACGTATTATTCCTTTATTCAGGCGGGAGGGGATGTTAAGACCCGTTGTACcagcag > 6:814101/1‑140 (MQ=255)
gCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAg > 5:859756/1‑82 (MQ=255)
cccccTGCGTCCACCGGAATATGAAAACAAT‑CCATCAACATTTTCACTGTTGGGCCGTTAAAAAGATTCCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTa < 5:544234/139‑1 (MQ=255)
cccTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTa > 7:909686/1‑138 (MQ=255)
cccTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTa > 7:475400/1‑138 (MQ=255)
cccTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTAta > 1:1043356/1‑139 (MQ=255)
cccTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATc > 1:205848/1‑140 (MQ=255)
cccTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGAATc > 6:651068/1‑140 (MQ=255)
cccTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCAGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATc > 2:899121/1‑140 (MQ=255)
gTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGTATGGCCGGGAAAAAGATTACACTCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGTCGGGGATGTTAAGACCCGTTTTACCATCAGTATCAATAACg > 6:848119/1‑140 (MQ=255)
ccGCAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGTAAAAATATTCCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGaac < 1:422416/140‑1 (MQ=255)
taaTTTCAAAAAAAAACAATC‑ATATTTTCAATGTATGGCCGGTAAAAATATTCCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGaacaac < 1:119972/139‑1 (MQ=255)
gAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGaacaac < 6:894683/140‑1 (MQ=255)
aaaacaaaacCATC‑AGTTTTTCATTGGTTGGCGGGTAAAAAGTTTCCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTg < 7:107499/138‑1 (MQ=255)
aaaaaaaaACCCTC‑ATATTTTCACTGGAGGGCCGTAAAAAAGATAACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGca < 5:999433/140‑1 (MQ=255)
aaaaCAATCCCATC‑ATTTTTTCACTGGATGGCCGGTAAAAAGTTTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGAAGTATCAATAACGGAACAACCACTGca < 1:818854/140‑1 (MQ=255)
cAATACCATC‑ATTTTTGATCTGTAGGGCCGTGAAAAAGATTACCCGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATg < 5:508983/140‑1 (MQ=255)
cAATACCATC‑ATTATTGCATGGGATGGCCGGCAAAAAGATACCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATg < 3:338206/140‑1 (MQ=255)
aaaTACCATA‑AGATTTTCCCTGGATGCCCGGTAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGTGGATGTTAACACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGcaca < 7:990330/137‑1 (MQ=255)
tACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAg > 2:714821/1‑140 (MQ=255)
tACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCAGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCAATGCACATGCAg > 3:737463/1‑140 (MQ=255)
aCCATC‑ATTTTTTCACTGGAGGGCGGGTAAAAATATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCa < 8:584908/138‑1 (MQ=255)
aCCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAgg < 2:208999/140‑1 (MQ=255)
aGATTTTCACTGGTTGGCGGGTAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAgtgt < 1:5292/140‑1 (MQ=255)
aGATTTCCACTGGTTGGCCGGGAATATGATAACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAgtgt < 4:952566/140‑1 (MQ=255)
aGATTTCAACTGGATGGCCGGTAATAAGATTCCACGCCCGGTAAGACGTATTATTACGTTATTCAGGCGGGCGGGGATGTTATGACCCGTTTTACCAGCAGTAGCAATAACGGAACAACCACTGCACATGCAGGTAgtgt < 6:400216/140‑1 (MQ=255)
taTTTTAACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTAAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAgtgaa > 3:100505/2‑138 (MQ=255)
gATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACcag > 4:568486/1‑97 (MQ=255)
aTTTTCACTGCATGGCCGTTAATAATATAACACGCCCGGTATTACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCAGATGCAGGTAGTGGCa < 4:382179/140‑1 (MQ=255)
cACTGGAGGCCCGGTAAAAATATACCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACTTGCAGGTAGTGTCAGTCCg < 3:178705/140‑1 (MQ=255)
gtgttgggCCGGTAAAAAGAATCCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCg < 7:589677/132‑1 (MQ=255)
ctggtgggCGGGGAAAAATATTACACGCGCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCTGGGATGTTAAGACCCGTTTTACCAGAAGTATCAATAACGGAACAACCAATGCACATGCAGGTAGTGTCAGTCCggt < 5:943239/134‑1 (MQ=255)
cTGGATGGCCGGGAAAACGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCggt < 4:1038813/140‑1 (MQ=255)
cTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCggt < 2:874243/140‑1 (MQ=255)
cTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCggt < 2:799363/140‑1 (MQ=255)
tGGATGGCCGGGAAAAAGATTCCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCgg < 8:754956/138‑1 (MQ=255)
tGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCggtg < 2:1137945/140‑1 (MQ=255)
taTGGCCGGTAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCggtg < 7:800543/137‑1 (MQ=255)
gATGGCCGTTCAAATGATTACACGCCCGGTAAGACGTATTATTCCGCTATTCACGCGGGCGGGGATTTTAAGACCAGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCggtg < 7:186987/138‑1 (MQ=255)
gATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCggaggt > 3:618019/1‑140 (MQ=255)
gATGGCCGGGAAAAAGATTACAAGCCCGGGAAGACGAATTATTCCGTAATTCAGGCGGGCGGGGATGTAAAGCCCAGTTTTACCAGCAGTATCATTAACGGAACAACCACAGCACATGCAGGTAGTGTCAGTCCggtggg > 3:437380/1‑139 (MQ=255)
ctgggCGGGCAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTAGCAGCAGTATAAATAACGGAACAACCACTGCACATGCAGGTAGTGTCTGTCCggtggt < 3:875382/137‑1 (MQ=255)
ggCCGGGAAAACTATTACACGCCCGGTAAGACGTATTAATCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCGGTGGtc < 8:115890/138‑1 (MQ=255)
ggCCGGGAAAAAGATTCCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTGTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCGGTGGtctc < 1:370010/140‑1 (MQ=255)
ggCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAATGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCGGTGGtctc < 6:706686/140‑1 (MQ=255)
ggCCGGCAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCGGTGGtctc < 4:623972/140‑1 (MQ=255)
ccGGTAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCGGTGGTCTCTg < 4:996331/140‑1 (MQ=255)
ccGGGAAAAATATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCGGTGGTCTCTg < 4:756484/140‑1 (MQ=255)
ggAATACGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGGCAGTCCGGTGGTCTCTGCAc < 3:1117708/140‑1 (MQ=255)
ggAAAAAGATTCCACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCGGTGGTCTCTGCAc < 1:40065/140‑1 (MQ=255)
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GACAGAGAATGAATATCTGGTATACCGCTACGACCCGAAAACGTTTTACGGTAGCTATGCAACAGGCTCTCTGGATAAACTGCCCCTGCTGTCACCGGAATTTGAAAACAATACCATC‑AGATTTTCACTGGATGGCCGGGAAAAAGATTACACGCCCGGTAAGACGTATTATTCCGTTATTCAGGCGGGCGGGGATGTTAAGACCCGTTTTACCAGCAGTATCAATAACGGAACAACCACTGCACATGCAGGTAGTGTCAGTCCGGTGGTCTCTGCAC > NZ_CP022686/3806117‑3806394
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
