Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F2 I0 R1
|
233 |
6461.8 |
9239822 |
98.3% |
9082745 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,951,547 |
T→G |
19.2% |
S47R (AGT→AGG) |
topA → |
type I DNA topoisomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,951,547 | 0 | T | G | 19.2%
| 312.8
/ 12.9
| 195 | S47R (AGT→AGG) | topA | type I DNA topoisomerase |
| Reads supporting (aligned to +/- strand): ref base T (94/52); new base G (2/39); total (99/96) |
| Fisher's exact test for biased strand distribution p-value = 1.49e-12 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 195 total aligned reads displayed.
GGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGCCTGGTAAAGAGAAGGT > NZ_CP022686/4951409‑4951681
|
gTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGcc > 1:615935/1‑140 (MQ=255)
aaaGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCCACTGCCAAAAA‑GAGTGcc > 5:282988/1‑138 (MQ=255)
aaaGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGcc > 5:76365/1‑138 (MQ=255)
aaGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCAAATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGAc > 3:784862/1‑140 (MQ=255)
gcgctTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAACAA‑GAGTGCCGAc > 6:213011/4‑138 (MQ=255)
gCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCTAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCCGCGTCGGTCACATCCGCGATTTGCCGCCCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGAc > 6:1027080/1‑138 (MQ=255)
ttGTCATCGTTGCGCCCCCGCCAAACGCCAAAACCACCAACAATTAGCTGGTTAGTGACTCCGTGGTTAAATCCAGCGGCGGTCACATCCGCGATTTGCCGCCAAGTGGCTCAACTCCAAAAAC‑GAGTGCCGACTCTAcc < 4:239499/140‑1 (MQ=255)
ttGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGCCCAGTGGCTCAACTGCCAAAAA‑GAGGGCCGACTCTAcc > 1:1163311/1‑140 (MQ=255)
ttGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTAcc > 2:609396/1‑140 (MQ=255)
ttGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTAcc > 1:735858/1‑140 (MQ=255)
ttGTCATCGTTGAGTCAACGGCAAAAGCCTAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGACATCCAGCGTCGGTCACATCAGCTATATGCAGCCCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTAcc > 8:673845/1‑140 (MQ=255)
gTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTAcc > 5:504994/1‑138 (MQ=255)
ccGGCAAACGCCAAACCTATCACCAAGTATCTGGGTAGTGACTACGTGGTCAAAACCCGCGGCGGTCACAGCCGCTATTGGCCGCCCAGGGGCTCAACTCCCAAAAC‑GAGTCCCGACTCTACCTCCACCAAGACGGCTaa < 3:436497/140‑1 (MQ=255)
acaGCAAAAACGATCAACAATTATCTGGGTAGTGAATACGTGGTTAAATCCCGCGTCGGCCACATCCGCGATTTGCCGACCAGTGGCTCAACTCCAAAAAA‑GAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGcc < 2:283246/138‑1 (MQ=255)
aaaCGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGTCGACCAGAGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACGTCCACCAAGACGGCTAAAAAGCCTAAAAAg > 8:357088/1‑140 (MQ=255)
aaaCGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATATTCCGCCCTGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACAAAGACGGCTAAAAAGCCTAAAAAg > 7:133856/1‑140 (MQ=255)
cGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGAt > 3:993874/1‑140 (MQ=255)
ttagcTGGTTAGTGACTACGTGGGTAAATCCAGCGTCGGTCACATCCGCTATTTGCCGACATGTGGCTCAAATGCAAAAAA‑TAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGgcg < 1:1103779/136‑1 (MQ=255)
ttATCTGGGTAGTGACTACGTGGGTAAATCCCGCGGCGGACACAGCCGCGATTTGCCGCCCCGTGGCTCAACTGCAAAAAA‑GTGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGgcg < 4:889980/139‑1 (MQ=255)
gTATGTGGGTAGTGACTACGTGGTGAAATCCCGCGTCGGGCACATCCGCTTTTTGCCGCCCTGGGGCACAACTGCAAAAAC‑GTGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGgcg < 4:980810/140‑1 (MQ=255)
ttcggggTAGTGACTAGGGGGTGAAATCCCGCGTCGGCCACATCCGCGATTTCCCGACCAGGGGCTCAACTGCAAAAAA‑GAGGCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGct < 8:402561/136‑1 (MQ=255)
aTCTGGGTAGTGACTACGTGGTGAAATCCAGCTTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAACAAGCCTAAAAAGGAGGAACGTGgcg > 6:663280/1‑138 (MQ=255)
tCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGACAAAAA‑GAGTGACGACTCTACCTCCACCAAGACGGCGAACAAGCCTAAAAAGGATGAACGTGgcgc > 5:21019/1‑138 (MQ=255)
gtttgTGAATACGTGTTTAAAGCCAGGGTCGGTCACATCGGCGTTTTCCCGACCAGTGGCTCAACTTCAAAAAA‑GTGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGt < 7:742037/136‑1 (MQ=255)
ggaaGTGACTACGTGGTGAAATCCAGCGTCGGTCACACCCGCTATTTGCCGACCAGGGGCTCACCTGCAAAAAA‑GAGGCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGt < 4:1159622/137‑1 (MQ=255)
ggTAGTGAGTCCGTGGTTAATGCCAGCGTGGGTCACTTCCGCTTTTTGCCTCCCAGGGCGTACTCTGCAAAAAA‑GTGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCtctc < 6:1131737/138‑1 (MQ=255)
ggTAGTGACTACGTGGTTAAAACCCGCGTCGGTCACATCCGCTATTTGCCGACCAGTGGCTCAACTGCAAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGt < 1:1027205/140‑1 (MQ=255)
ggTAGTGACTACGTGGTGAAATCCTGCGTGGGTCACATCCGCTATTTGCCGACCAGGGGCTCAACTCCCAAAAA‑GTGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGt < 3:942661/140‑1 (MQ=255)
ggTAGGGCCTCCGGGGTCAAACCGCGCGTCGGCCACACCGGCTTTTTGCCCACCTGTGGCT‑AATCGCCAAAAATGTTGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCtctc < 5:405708/138‑1 (MQ=255)
gtcgTGACTCCGGGGTGAAATCCTGCGGCGGGCACATCTGCTATTTGCCGCCCCGTGGCCAAACGCCCAAAAA‑GTGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCg < 5:825298/135‑1 (MQ=255)
gTAGTGCCTCCGTGGTTAACTCCCGCGTGGGCCACACCGGGTATGCGACGCCGTGGGCCTCAACTGACAAAAA‑GAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTc < 2:1016727/140‑1 (MQ=255)
tAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTCCCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGt > 5:791207/1‑138 (MQ=255)
tAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGt > 5:554362/1‑138 (MQ=255)
tgttccTACGGGGGTAAAACCAGCGCCGGCCACATCCGCGATTTGCCGACCAGTGGCTCAACTCCAAAAAA‑CAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAACGGATGAACGTGGCGCTCTCGTCaa < 8:907594/135‑1 (MQ=255)
tgTGACTCCGGGGTGAAATCCCGCGGCGGCCACAGCCGCGATTTGCCGACCAGGGGCGCACCTGCCAAAAC‑GAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTc < 5:34691/137‑1 (MQ=255)
tgTGACTAGGTGGTTAAATCCCGCGGCGGCCAAATCCGCGATTTGCCGACCTGTGGCTCAACTGCAAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCaa < 8:47379/139‑1 (MQ=255)
tgTGACTACGTGTTGAAATCCAGCGGCGGGCACATCCGCGATTTGCCGACCTGGGGCTCAACTGCAAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTc < 6:303345/137‑1 (MQ=255)
gctGACTCCGTGTTTAAATCACGCGTCGGCAACACCCGCTTTTTGCCGACCTGGGGCGAATCTGCAAAAAA‑GATGGCCGACTCTACCTCCACCAAGACGTCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTc < 6:865357/136‑1 (MQ=255)
aGTTACTTCGTTGTTAAAACCAGCGGCGGTCACATCCTCTATTTCCCTACCAGGGGCTCACCTCCAAAAAA‑GTGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTc < 6:760729/138‑1 (MQ=255)
aGTGATTACGTTGTCAAATCCAGCGTCGGTCACATCCTAGTTTTGCCGCCCCGTGTCTCAACTCCAAAAAA‑GAGGCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCaa < 2:528197/140‑1 (MQ=255)
aGTGACTACGTGTGTAAATCCAGCGTCGGGCACATCCGCTTTTTGCCCCCCAGGGGCTCAACTGCCAAAAA‑GAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTc < 5:893239/138‑1 (MQ=255)
gTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGCCCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCACGACGGCGAAAAAGACTAAAAAGGATGAACGTGGCGCTCTCGTCAAc > 7:512279/1‑140 (MQ=255)
gTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAc > 8:842359/1‑140 (MQ=255)
gTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAc > 3:1038634/1‑140 (MQ=255)
gTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAc > 3:133843/1‑140 (MQ=255)
tGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAcc > 1:60445/1‑140 (MQ=255)
gACTACGTTGTGAAATCCAGCGTCTGACACATCCGCGATTTGCCGCACAGTGGATCAAATGACTAAAA‑GAGTGGCTACTATACCTCCCCAAAGACGGGGAAACAGCCTAAAAATGATGAACGTGGCGCTATCGTCacc > 6:294449/1‑136 (MQ=255)
aCTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAccc > 5:946118/1‑138 (MQ=255)
taggtggttAAATCCAGCGTCGGTCCCACCCGCTATTTCCCTACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTAt < 4:68552/137‑1 (MQ=255)
taggtggttAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCTGTGGCTCAACTCCCAAAAA‑CCGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTAt < 3:675566/137‑1 (MQ=255)
tACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCTGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGt > 5:908984/1‑138 (MQ=255)
caCGTGTTTAAATCCAGCGTCGGTCACATCCGCCATTTGCCGACCAGTGGCACAACTGCAAAAAA‑GAGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGt < 6:570876/137‑1 (MQ=255)
aCGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATg > 3:484532/1‑140 (MQ=255)
gtggtgAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCAACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATggg > 1:797360/1‑140 (MQ=255)
cccgcggcgGTCACATCCGCGATTTGCCCACCAGTGGCACAACTGCAAAAAA‑GAGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCg < 2:413566/137‑1 (MQ=255)
ggggcGGTCAAATCCGCTTTTTGCCGACAAGTGGCACACCTGCAAAAAC‑TAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTgg < 4:1009391/136‑1 (MQ=255)
gCGTCGGTCCCATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTACAAAGCCGAAAAAGGATGAACGTGGCGCGCTCGTCAACCGTATGGGGGGTGACCCGTgg > 8:824526/1‑140 (MQ=255)
gCGTCGGTCACATCCGCGATTTCCCGCCCAGTGGCACACCTGCAAAAAC‑GAGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTgg < 7:791986/140‑1 (MQ=255)
gCGTCGGTCACAACCGCTATTTGCCTCCCAGTGGCTCAACTGCCAAAAA‑GAGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTgg < 4:639621/140‑1 (MQ=255)
cGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCACCCGTATGGGGGTTGCCCCGTGGc > 3:304219/1‑140 (MQ=255)
cGTCGGTCACATCCGCGATTTGCCCACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAATGGATGAACGTGGCGCTCTCGTCAACCGTAGGCGGGTTGCCCCGTggg > 7:326557/1‑139 (MQ=255)
gTCGGTCAATACGGCGATTTGCCGACCATTGTCTCAACTGCAAAAAT‑TCGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGca < 4:365247/140‑1 (MQ=255)
gTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGCCTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAAt > 2:870043/1‑140 (MQ=255)
gTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACTTGGCGCTCTCGTCAAACGTATGGGGGTTGCCCCGTGGCACAAt > 7:658989/1‑140 (MQ=255)
gTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAAt > 2:640056/1‑140 (MQ=255)
gTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAAt > 2:1148534/1‑140 (MQ=255)
gccGCGATTGCCCGACCAGGGGGACACCTGCCAAAAA‑GCGTGCCGACTCTTCCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGTGGTTGACCCGTGGCACAATTGGGAg < 7:38168/139‑1 (MQ=255)
gggATTTGCCGACCTGTGGCGCAACACACAAAAT‑TCGGGCCGCCTCTACCTCCACCAAGACGGCTAAAAAGCCTAAATAGGATGAACGTGGCGCTCTGGTCATCCGTATGGGGGGTGACCCGTGGCACAATTGGGAGgcg < 7:117142/138‑1 (MQ=255)
gcgTTTTGCCGACCTGTGGCTAAAGTGCCAAAAA‑GCGGCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGgcg < 1:140045/140‑1 (MQ=255)
gcgATTTGCCGACCTGTGGCTCAACTGCAAAAAA‑CTGGCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGgcg < 3:587162/140‑1 (MQ=255)
gcgATTTGCCGACCTGTGGCTCAACTCCAAAAAA‑GAGCCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGgcg < 1:291184/140‑1 (MQ=255)
gcgATTTGCCGACAAGTGGCTAAACTCCAAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAgg < 5:79644/138‑1 (MQ=255)
ggATTTGCCGCCCTGGGGCCCACCTGCCAAAAA‑CTGAGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGgcgc < 8:178545/139‑1 (MQ=255)
cgATTTGCCGACCAGTGGCTCACCTGCCAAAAA‑GCGTGCCGACTCTCCCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTGGACCCGTGGCACAAGTTGGAGgcgc > 8:462989/1‑140 (MQ=255)
cgATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGgcgc < 1:842751/140‑1 (MQ=255)
cgATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGGGCCGACTCTAACTCCACCAAGACGGCTAAAAAGCCTAAAAATGATGAACGTGGCGCTCTCGTCAACCGTAAGGGCGTTGACCCGTGGGACAATTGAGAGgccc > 7:899870/1‑138 (MQ=255)
tttGCCGACATGTGGCTCAACTGCAAAAAA‑TCCTGACGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCa < 6:923143/138‑1 (MQ=255)
tGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTAt > 4:601829/1‑140 (MQ=255)
agCCGACCAGTCGCTCAACAGCCAAAAA‑GAGTGCCGACACTACCTCCACCAAGACGGCTAAAAAGCCGAAAAAGGATCAACGTCGCTCTCTCGTCCACCGTATGGGTGTTGACCCGTGGCACACATGGAAGGCGCACTaa > 7:610227/2‑139 (MQ=255)
gCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATg < 2:773700/140‑1 (MQ=255)
gCCGACCAGTGGCCCAACTGCCAAAAA‑GCGCGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATg < 2:235939/140‑1 (MQ=255)
ccaCCCGTGGCTCCCCTCCCAAAAT‑GAGCCCCGACTCTACCTCCACCAAGACGTCTAAAAAGCCTAAAAAGGCTGACCGGGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCCCAATTTGGAGGCGCACTATGaa < 8:915981/138‑1 (MQ=255)
ccAGTGGCTCAAGTCCCAATAC‑CTGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGAGGAACGGGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAgtg < 4:307752/140‑1 (MQ=255)
ccAGTGGCTCAACTGCCAAAAC‑GCGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAgtg < 2:338339/140‑1 (MQ=255)
ccAGTGGCTCAACTGCCAAAAA‑GCGTGCCGACTCTACCTCCACCAAGACGGCTAAAAATCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAg < 6:541852/138‑1 (MQ=255)
tgTGCCTAAACTGCAAAAAA‑CCGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGGCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGtt < 2:200380/139‑1 (MQ=255)
tGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACATCCACCAAGACGGCTAAAAAGCCTAAAAAGTATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGc > 4:657535/1‑140 (MQ=255)
ggCTAAACTGCAAAAAA‑GTGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGcc < 3:535095/140‑1 (MQ=255)
gCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGc > 6:629093/1‑138 (MQ=255)
taaaCTGCTAAAAT‑CAGGGCCGACTCTACCTCCACAAAGACGTCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAGCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCTCACTATGAAGTGTTGCCTgg < 2:838077/138‑1 (MQ=255)
aaaCTGCCAAAAA‑GCGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGCCTGGt < 2:877109/139‑1 (MQ=255)
aaaCTGCAAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGCCTg < 5:1051103/137‑1 (MQ=255)
aCTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAACGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGATGCGCACTATGAAGTGTGGCCTGGTaa > 7:463038/1‑140 (MQ=255)
aCTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATTAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGGGGCACAATTGGGAGGCGCACGATGAAGTGTGTCCTGGTaa > 1:562162/1‑140 (MQ=255)
aCTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATg < 1:873496/124‑1 (MQ=255)
aCTGCCAAAAA‑GAGTGCCGACTCGAACTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGCCGCTCTCGTAAACCGTATGGGGGTTGACCCGTGGCACAATTGGGATGCGCACTATGAAGTGTTGccagtgaa > 4:1025362/1‑134 (MQ=255)
tGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGCCTGGTaa > 5:614857/1‑138 (MQ=255)
gCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTTACCCGAGGAACAATTGGGAGGCGCACTATGAAGTGTTGCCTGGTAAaga > 3:1156802/1‑140 (MQ=255)
gCCAAAAA‑GAGTGCCGACACTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCTTCAAACGTATTGTGTTTGCCCCGTGTCACAATTTGGAGGCGCACTATGAAGTGTTTCCTGGTAAaga > 8:539768/1‑140 (MQ=255)
aa‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGCCTGGTAAAGAGAAGgt < 4:505993/140‑1 (MQ=255)
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GGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAA‑GAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGCCTGGTAAAGAGAAGGT > NZ_CP022686/4951409‑4951681
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
