Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F2 I0 R1
|
117 |
5184.3 |
6857682 |
98.3% |
6741101 |
135.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,808,135 |
C→A |
15.6% |
P444T (CCT→ACT) |
ubiB → |
ubiquinone biosynthesis regulatory protein kinase UbiB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,808,135 | 0 | C | A | 15.6%
| 291.1
/ 7.5
| 153 | P444T (CCT→ACT) | ubiB | ubiquinone biosynthesis regulatory protein kinase UbiB |
| Reads supporting (aligned to +/- strand): ref base C (41/74); new base A (30/2); total (77/76) |
| Fisher's exact test for biased strand distribution p-value = 1.88e-09 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 155 total aligned reads displayed.
AGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCATAGTGTTGATAAGATTGCCCGCGAGCTT > NZ_CP022686/2807996‑2808272
|
aGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTc < 6:253403/140‑1 (MQ=255)
tGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCt > 4:149591/1‑140 (MQ=255)
gcagcagcaTCTGTTTGTAGTCCAGAAACCCCTGCTCTACGTCGAGGGGGTAGGACGGGAGCTTTATCCGCTACTAGTTTTATGGAAAACGGCGTAGCCGTTGCTGGAGTCGTGGATTAAAGATCAGGGCTGTATTcc < 8:205286/138‑1 (MQ=255)
cAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGATTCGTGGATTAAATATCAGGGCGGGATTACTgc > 4:494357/1‑140 (MQ=255)
cAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTAGGTATTCCt > 8:299228/1‑138 (MQ=255)
aGCCGCAACTGGTGTTACTCCTGATAACCCTGCTCTACGTCGAAGGTGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTgcg < 5:669521/140‑1 (MQ=255)
aGCCGCAACTGGTGTTACTCCAGAAAACCGTGCTCTACGTCGAAGGGGTAGGACGACAGCTTTATCCGCTACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTg < 1:651905/138‑1 (MQ=255)
aGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTgcg < 3:731262/140‑1 (MQ=255)
aGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTg < 7:515397/138‑1 (MQ=255)
aGCCGCAACTGGTGTTAATCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGACAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTgcg < 5:307891/140‑1 (MQ=255)
gCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAATATAAGGTCGGTATTACTgc > 2:425575/1‑138 (MQ=255)
ccGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACCCCAGCGTTAACCGCAACTCGATTTATGGAAAACGGCGCAGCCTTTCCGGGAGTCGTGGATTTAATATCAGGTCGGTTTTCCTgcgcg > 3:172290/1‑139 (MQ=255)
gCAACTGGTGTTACTCCAGAAACCCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTACTGGAGTCGTGGTGTTAAGATAATGTGGGTATTACTgctgg > 7:460845/1‑135 (MQ=255)
tgtTACTCCAGAACACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGCAGCCTTTCCTGGAGTCGTGGATTAAAGCTCAGGTCGGTATTCCTGCGCGGGTGAGAGCa > 6:698001/1‑140 (MQ=255)
tgtTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTACTGCGCTGGTGAGAGCa > 5:32991/1‑140 (MQ=255)
tgtTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCAGGAGTCGTGGATTTAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCa > 6:389809/1‑140 (MQ=255)
aCTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTTTTCCTGCGCTGGTGAGAGCATTTa > 3:733799/1‑140 (MQ=255)
tCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGTTTAAATATCAGGTAGGTATTACTGCGCTGGTGAGAGCATTTa > 2:700718/1‑138 (MQ=255)
tCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTACAGCGCTGGTGAGAGCATTTa > 8:285103/1‑138 (MQ=255)
tCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATAAGGTCGGTATTCCTGCGCTGGTGAGAGCAtttt > 1:550530/1‑137 (MQ=255)
tCCAGAAAACCCTGCGCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGTTTAAAGATCACGTGGGTTTTACTGCGCTGGTGAGTGGAtttt > 1:848721/1‑137 (MQ=255)
ccAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTACTGGAGTCGTGGATTAAAGATAAGGTCTGTATTCATGGGGAGGTGAGAGCATTTaaat > 5:778723/1‑139 (MQ=255)
aGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGGTTTAAGATGAGGTAGGTTTTACTGAGCGGGGTAGAGCCTTTAAAGaa > 5:174469/1‑140 (MQ=255)
gAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAAAGGCGAAGCCTTTCCTGGAGTCGTGGATTAAATATAAGGTAGTTTTTCAAGCGCTTGTGAGATCATTTAAAGaaa > 5:62324/1‑140 (MQ=255)
aaccccTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCAGCGCGGGTGAGAGCATTTAAAGaaa > 2:736079/4‑138 (MQ=255)
cccTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAg < 2:71298/138‑1 (MQ=255)
tGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTACTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCg > 6:326709/1‑140 (MQ=255)
cGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTAGGTAATACTGCGCTGGTGAGAGCATTTAAATAAAAATCCCCCTTCTggg > 5:768435/1‑140 (MQ=255)
tCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGCTCAGGTGGGTATTCCTGCGCATGTGAGCGCCTTTAAAGAAAAAGCGCCGTTCTggg > 2:498714/1‑138 (MQ=255)
cGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTGCTGCGCTGGGGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCg > 6:335920/1‑140 (MQ=255)
cGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGAGTTAAGATCACGTCGGTATTACTGCGCGGGGGAGATCAATATAAGAAAAAGCGCCGTGCTGGGTCg > 4:579369/1‑140 (MQ=255)
aaGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTTAATATCATGTCGGTTTTGCTGCGCGGGTGAGAGCATTTTAAGAAAAACCGCCCTTCTtgggagaa > 3:162583/1‑135 (MQ=255)
aaGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGaa > 4:833831/1‑140 (MQ=255)
ggggTAGGACGCCAGCTTTATCCTCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGaaaa < 5:241647/140‑1 (MQ=255)
ggggTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGaa < 2:599050/138‑1 (MQ=255)
ggggTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGaa < 1:582904/138‑1 (MQ=255)
ggggTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGaa < 7:190156/138‑1 (MQ=255)
ggggTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTACTGCGCTGGGGAGAGCATTTAAATAAAAAGCGCCGTTCTGGGTCGaa > 8:134927/1‑138 (MQ=255)
ggggTACGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAATGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGAGCCTTTCTGGGTCGaa < 8:476748/138‑1 (MQ=255)
ggggGAGGACGACAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGGCGTGGATTAAAGATCAGGGCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGaa < 8:728449/138‑1 (MQ=255)
gTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTTAAGATCAGGTAGGTATTCCTGCGCGGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAAt > 4:93544/1‑140 (MQ=255)
gTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCGGGTGAGAGCATTTAAAGAAAAAGCGCCGGTCTGGGTCGaaaaaaa > 3:568200/1‑139 (MQ=255)
aGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTGTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGAGCTGGTGAGAGCATTTAAAGCAAAAGCGCCCGTATGGGGCGAATAAAt > 2:579465/1‑138 (MQ=255)
ggACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGATAGCAATTAAAAAAAAAGCCCCGTTCTGGGTCGaaaaaaat > 8:173925/1‑136 (MQ=255)
ccAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTTAATATGAGGTGGGTTTTGCTGCGCGGGTGTGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAAc > 3:87576/1‑140 (MQ=255)
cAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTTAAGATCAGGTCGGTATTACTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATTCCAGAACt > 6:501960/1‑140 (MQ=255)
cAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGaaaa > 6:10320/1‑128 (MQ=255)
cAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCAGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAAca > 6:297335/1‑139 (MQ=255)
gCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTTAAGATCAGGTCGGTATTACTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACt > 8:651849/1‑138 (MQ=255)
gCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGGGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACt > 7:460227/1‑138 (MQ=255)
cTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCATGTCCGTATTACAGCGCAGGTGAGTGCATTTAAAAAAAAAGCGCCCTTCTGTGTCGAAAAAATGCCAgcaatg > 2:844382/1‑133 (MQ=255)
tCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATAAGGTCGGGATTACAGCGCTGGTGAGAGAATTTAAATAAAAAGCCCCGTTATGGGTCGAAAAAAATCCAGAACTGCCCGaaa > 3:367515/1‑139 (MQ=255)
accGCACCTCTATTTATGGTAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGa < 8:229441/137‑1 (MQ=255)
accGCAACTCTATTTATTGAAAACGGCGAAGCCTTTCCTGGAGTCGTGTATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGa < 7:311586/137‑1 (MQ=255)
accGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGa < 8:238475/137‑1 (MQ=255)
cGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCACGTCGGTATTACTTAGCACGGGAGAGCAATTAAAGAAAAACCGACGTTAAGGGTCGAAAAAAATACAGAACTGCCCGCAc > 1:424437/1‑138 (MQ=255)
aaCTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTTAATATCAGGGCGGTATTACTGCGCGGGGGAGAGCATTTAAATAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCATAACAGCCCGAACTGGtt > 5:243709/1‑140 (MQ=255)
cTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGAATAAATATGAGGTGGGGTTTACTGGGCGGGTGAGAGCATTTAAAGAAAAACCGCCGGTCGTGGTCGCAAAAAAGACAGCACTGCCCGCACTgggt > 1:845740/1‑136 (MQ=255)
gATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGTGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTAc < 2:816909/138‑1 (MQ=255)
aTGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTGGGGATTCCTGCGCGGGTGAGCGCCTTTAAAGAAAAAGCGACGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACGTGTTTACGGCAGtt > 5:546424/1‑140 (MQ=255)
aaaCGGCGAAGCCTTTCCTGGAGTCGTTGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGGTTACGACAGTTTgcgc < 6:113990/140‑1 (MQ=255)
aaaCGGCGAAGCCTTTCCTGGAGTCGTGGATTTAAGATCAGGTCGGGATTCCAGCGGTGGGGAGAGCATTTTAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACAGGTTTACGAGAGTTTgcgc > 4:471899/1‑140 (MQ=255)
gCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAggg < 6:131824/140‑1 (MQ=255)
gCGAAGCCTTTCATGGAGTCGTGGATTAAAGATAAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAggg < 6:31250/140‑1 (MQ=255)
gacgCCTTTCCTGGTGTCGTGGATTAAAGATCAGGTCGGCATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAACCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACTACAGTTTGCGCCAggg < 7:505728/135‑1 (MQ=255)
aaGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGc < 2:277422/138‑1 (MQ=255)
aaGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCaa < 3:833831/140‑1 (MQ=255)
aaGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATATAAAGAAAAAGCGCCGTTCAGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGc < 1:204087/138‑1 (MQ=255)
aaGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGGATTCATGCGCGGGTGCGAGCAGTTAAAGAAAAAGCGCCGTTATGGGGCGAAAAAATTCCAGAACTGCCCGCACTGGTTTTCGACAGTTTTCGCCACGGc > 7:155262/1‑138 (MQ=255)
aaGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGGCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCaa < 6:561792/140‑1 (MQ=255)
gCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCaa < 1:700718/138‑1 (MQ=255)
cccTTACCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCaa < 1:15699/137‑1 (MQ=255)
tCCTGGAGTCGTGTCTTAACGATCTGGTCGGTATGCCTGCGCTGGTGATAGCATTTAAATTAAAAGCGCGGTTCTTTGAATAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCATGTATTTa < 6:87780/140‑1 (MQ=255)
tCCTGGAGTCGTGTATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTAtt < 1:778172/138‑1 (MQ=255)
tCCTGGAGTCGTGGTTTAACGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTa < 5:683399/140‑1 (MQ=255)
tCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGATATCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTAtt < 1:877915/138‑1 (MQ=255)
tCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTACAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTAtt < 1:832766/138‑1 (MQ=255)
tCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTAtt < 8:317728/138‑1 (MQ=255)
tCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTa < 3:149591/140‑1 (MQ=255)
tCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTa < 5:523825/140‑1 (MQ=255)
tCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGGTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTAtt < 2:731435/138‑1 (MQ=255)
tCCTGGAGTCGGGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGGCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTa < 3:807396/140‑1 (MQ=255)
ccTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGa > 2:545933/1‑102 (MQ=255)
ccTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGa < 1:545933/102‑1 (MQ=255)
gAGTCGTGGATTAAAGATCAGGGCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTTCCCGAACTTTTTTACGACATTTTGCGCCAGGGCAAGTATTTagag < 2:546406/138‑1 (MQ=255)
gAGTCGGTGATTAAAGAGCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAg < 7:222732/138‑1 (MQ=255)
gAGGCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCGGGGGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAg < 2:232003/138‑1 (MQ=255)
gTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCa < 1:270344/138‑1 (MQ=255)
gTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCa < 8:460227/138‑1 (MQ=255)
tGGAGTAAAGATCAAGTCGGTATTACTGCGCGGGTGAGAGCATTTAAATAAAAAACGCCGTTCATGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTAAGACAGTTTTCGCCCTGGCAATTATTTTCATCAAAttgt > 6:197889/1‑140 (MQ=255)
ggATTAAAGATCAGGTCGGTATTACTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGACCTGCCCGCACTGGTTTAAGCCAGTTTGCGCCAGGGCAAGTATTTACAGCATAgtg > 7:694637/1‑138 (MQ=255)
ttAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCATAGTGTTGAt < 4:367515/140‑1 (MQ=255)
aGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGtt < 4:667622/96‑1 (MQ=255)
aGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGtt > 3:667622/1‑96 (MQ=255)
ggTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCATAGTGTTGATAAGATTGc > 8:647534/1‑138 (MQ=255)
gTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCATAGTGTTGATAAGATTGcc > 1:883603/1‑138 (MQ=255)
cgcgcttCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCAGAAGTGGTTTACGACAGTTCGCGCCAGGGCAAGTATTTACAGCATAGTGTTGATAAGATTGCCcg < 8:67317/133‑1 (MQ=255)
cGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCATAGTGTTGATAAGATTGCCcg > 2:164768/1‑138 (MQ=255)
ttCCTGCGCTGGTGCGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCATAGTGTTGATAAGATTGCCCGCGAGCtt < 3:31886/140‑1 (MQ=255)
ttCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCATAGTGTTGATAAGATTGCCCGCGAGc > 8:628562/1‑138 (MQ=255)
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AGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCCGAACTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCATAGTGTTGATAAGATTGCCCGCGAGCTT > NZ_CP022686/2807996‑2808272
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
