Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F35 I0 R1
|
157 |
6985.9 |
8006972 |
98.3% |
7870853 |
134.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,868,753 |
T→G |
11.7% |
T18P (ACC→CCC) |
fdoH ← |
formate dehydrogenase O subunit beta |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,868,753 | 0 | T | G | 11.7%
| 237.2
/ 11.5
| 128 | T18P (ACC→CCC) | fdoH | formate dehydrogenase O subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (12/99); new base G (13/4); total (25/103) |
| Fisher's exact test for biased strand distribution p-value = 3.87e-08 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 135 total aligned reads displayed.
CCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTC > NZ_CP022686/2868614‑2868892
|
ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGt < 7:927150/140‑1 (MQ=255)
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTc > 8:777505/1‑140 (MQ=255)
aTGTTATTGCCTACGGTATCGCGAATGTCGTTCCACTCTGAAAACGCCACCTGACAGGCTGTAAAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCTGAGTCTCGGGGGtg > 6:100711/1‑137 (MQ=255)
aTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCCCCGGAGGCGCCGGGGtg > 6:93189/1‑137 (MQ=255)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCACCTCCGGCGGCGCGGGGGTCAGCCCGtt > 8:927150/1‑140 (MQ=21)
ttGCCGACGGTAGCGCGAATGTCGTACCACTCTGACCACGCCACCTGACAGGCTTTACAGCCTATACAGGTGGTAACGTCGCTGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCg < 5:415369/138‑1 (MQ=37)
gCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTGAGACCggt > 2:749691/1‑136 (MQ=255)
cGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGGGCGGGGGTCATCCCGTTAGtgg > 2:789566/1‑136 (MQ=21)
tCGCTAATGTCGTTCCACTCTGACCCCGCCACCTGACAGGCTTTACAGCCGATTCAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGaa < 3:657977/138‑1 (MQ=255)
tCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGaa < 4:992372/138‑1 (MQ=255)
tCGCGAATGGCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGaa < 6:454516/138‑1 (MQ=255)
tCGCGAATGGCGGTCCACTCGGAACCCGCCACCTGACAGGCTTTACACCCTATACCGGTGGTAACGTCGATGAGTTTCGCCACTTCTGCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGGCAGACCGTTAGTCGCGGaa < 2:458134/138‑1 (MQ=25)
gcgAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAacg < 4:785353/138‑1 (MQ=255)
cgAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGGGCGGGGGGCCGCCCGTTTGTCgggggaagc > 4:329336/1‑133 (MQ=21)
gAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAacgac < 4:389579/138‑1 (MQ=255)
gAATGTCGTGCCACTCTGAACCCGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGGCGATGAGTTGCGCCACTTCTTCCTGGCAGTCCCGCGCCGGAGGCGCGGGGGGCAGACCGTTAGTCGCGGAacgac < 2:90499/138‑1 (MQ=25)
tGAACACGCCACCTGACAGGCTTTCCAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGa < 3:135792/138‑1 (MQ=255)
aaCACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGCGCGGGGGGCAGCCCGGTAGTCGGGGAACGACGAATTATATATTGCGAtt > 3:611493/1‑138 (MQ=25)
aaCACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCCGGGGGGGGGGGGGGAGACCGGGTGTGGCGGGCCGCCGCATGTTATGTTGCGCtt > 5:12499/1‑138 (MQ=12)
ccccGCCCCCTGAACGGCTTTCCCGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTGCCTGGACGTCCCGCGCCGGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 5:145683/135‑1 (MQ=255)
cccagCCTCCTGAGAGGCTTTACAGCCGATCCAGGGGTTAAGGTCGAGGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 3:279672/134‑1 (MQ=255)
ccacGCCCCCTGACTGGCTTAACAGCCGATACAGGTGGTAACGTCCATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGTGGCGGTGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 1:30812/137‑1 (MQ=255)
ccacGCCCCCTGACAGGCTTAACAGCCGATTCAGGTGGTAAAGACGATGAGTTTCTCCACTTCTTCCTGGAAGTCCCGCGCCTGTGGCGCGGGGTTCAGACCGTTAGTCGCTGAACGACGATTGATATCTTGCGATTg < 2:62396/137‑1 (MQ=255)
ccacGCCACCTGACAGGCTTTAAAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 3:131679/137‑1 (MQ=255)
agacGACACCTGTCAGGCTTTAGAGGCGATACTGTGGGTTTCGTGGATGAGTATCGCCACTTCTTCGTGGAAGTCGCGGGCCTGAGGCGCGGGGGTCAGACCGTTTGTCGCGGAAAGTCGAATGATATCTTGCGAGTg < 2:542813/136‑1 (MQ=255)
actcGCCACCTGACTGGCCTTACAGACGATACAGGTGGTATCGGCGTAGAGTTACGCCACTTCTTCGTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 2:97862/135‑1 (MQ=255)
acccGCCCCCTGACAGGCTTTAACGCCGATACAGGTGGTAACGTCGAGGATTTTCGCCACTTCTTCCTGGCAGTCCCGCGCCTGAGGCGATGGGGGCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 2:946811/135‑1 (MQ=255)
acccGCCACCTGACAGGCTTTACCGCCGATTCAGGTGGTAACGGCGATGAGGTTCGCCACTTCTTCCTGGACGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 4:606615/135‑1 (MQ=38)
acccGCCACCTCACAGGCTTAACAGCCTATACAGGGGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 7:490866/137‑1 (MQ=255)
acacGCCACCTGTCCGGCTTTACCGCCGATACCGGTGGTAACGTCGAGGCGTATCGCAACTTCTTCCTGGAAGCCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 3:528691/138‑1 (MQ=255)
acacGCCACCTGCCAGGCTTTCCAGCCGATACAGGTGGTAACGTCGAGGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTTAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 8:373788/140‑1 (MQ=255)
acacGCCACCTGACCGGCTTTACAGCCTATACAGGTGGTAACGTCGATTAGTTCCGCCACTTCTTCCTGCAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 7:50657/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTCCAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 6:122338/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACCGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 8:29082/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCTAGGAGTTTCGCCACTTCTTCCTGGATGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCTCGGAACGACGAATGATATCTTGCGATTg < 4:410153/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGCGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 8:300155/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 4:690933/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 5:855555/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 4:555350/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 6:297499/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 1:229696/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 2:276458/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 8:429485/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTGCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 8:619678/140‑1 (MQ=255)
acacGCCACCTGACAGGATTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCGGGAAGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 1:4002/138‑1 (MQ=255)
cacGCCACCTGACAGGCTATACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCTCTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATa < 8:164588/140‑1 (MQ=255)
gCCACTTGACAGGCTTAACAGCCGATACTGGTGGTAACGGCGATGATTTTCCCCACTTCTCCCTGGACGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGc < 7:351126/140‑1 (MQ=255)
gCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGCGCGGGGGGGAGACCGGTAGTGGCGGCACGCCGAAATATATATTTGGATTTTTAAGc > 7:417098/1‑140 (MQ=21)
cACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTGCCGCGCCGGAGGCGCGGGGGGGAGACCGTTTTTCGGCGGACGCCGAATGATATCTTGCGATTTATTAGc > 6:435582/1‑138 (MQ=25)
cACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCAGGGGCGCGGGGGGGAGCCCGGTAGTCGCGGACCGACGAATGATATGATGCGATTGATAAGc > 6:553340/1‑138 (MQ=25)
ccTGACAGGCTTTACAGCCGATACAGGTGTTAACGTCGAAGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCa < 3:598482/138‑1 (MQ=255)
catGACAGTCTTTACAGCATATACTGGTGTTAACGTCGATTATGTTCGCCACTTCTTCCTGGAAGGCCCGCGCCTGAGTCGCGGGGGTCAGACCGTTAGTCGCTGAACGACGAATGATATCTTGCGATTGATAAGCCa < 6:167337/136‑1 (MQ=255)
gACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGCGGCGCGGGGGGCAGCCCGGTAGTCGCGGAACGCCGAAAGATATATTTGGAATGTTAAGCCataa > 4:425133/1‑137 (MQ=25)
tgtcTTTACAGGCGATACAGGTTGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGATGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 1:808885/135‑1 (MQ=255)
tggatttACAGCCGATAGAGGTTTTAACGTCGTTGAGTTTCGCGACTTCTTCCTGTAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 2:639722/134‑1 (MQ=255)
cggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 1:593890/137‑1 (MQ=255)
cggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 2:288206/137‑1 (MQ=255)
aGGGTTTAAATCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCTCGCCTGAGTCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 6:394468/138‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 3:416117/138‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 1:773529/138‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 1:784596/138‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 4:705165/138‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 3:832643/138‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGGGGCGCGGGGGTGAGGCCGGGTGTCGCGGCACCACGAATGATTTCGTTGGATTGATAAGCCACATgtgag > 8:643264/1‑137 (MQ=21)
gCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGtct < 8:168091/140‑1 (MQ=255)
tttACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGTGGCGCGGGGGTCAGACCGGTAGTCGCGGGACGCCGAATGATATCTTTCGATTTATAAGCCAAATGTCGtct > 4:718644/1‑138 (MQ=38)
tACAGCCGATACAGGTGGTAACGTCGAGGAGTTTCGCCACTTGTTCCTTGACGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTcc < 5:194494/138‑1 (MQ=255)
ccgcgtaacacGTGGGTACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTac < 7:559925/133‑1 (MQ=255)
taTACCGGTGGTAAGGTGGATGATGTTCGCCACTTCTTCCTGGACGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTacac < 3:10004/137‑1 (MQ=255)
tACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGCGCGGGGGGGAGACCCGTAGTCGCGGCACGCCGCATGATATATTGCGATTGATAAGCCATATGTGGTGTCC‑GGTAAAcca > 4:502098/1‑137 (MQ=255)
cAGGTGGTAACGTCGATGAGTTTCGCGACTTCTTCCTTGAAGTTCCGAGCCTGAGGCGCGGGGGTAAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCttt < 4:309981/138‑1 (MQ=255)
tggtAACGTCGATGAGTTTCGCCACTTGTTCCTGTAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCca < 6:597956/138‑1 (MQ=255)
gggtAACGTCGATGAGTTGCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCcaca < 8:31323/139‑1 (MQ=255)
gtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTGCCCCGCCGGAGGGGCGGGGGGGAGACCGGTAGTGGCGGAACGACGAATTATATCTTTGGATTGTAAATCCAAATGTAGTCGCC‑CTTTAACCATTTAcaca > 6:940275/1‑138 (MQ=255)
gATTAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACTAATTATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACaagga < 8:74111/140‑1 (MQ=255)
gATGCGTTTCGCCCATTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACaag < 5:698488/138‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACaag < 3:379594/138‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACaag < 3:79721/138‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACaag < 3:881958/138‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACaag < 5:351512/138‑1 (MQ=255)
gATGAGTTTCGCCACTTCATCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACaagga < 8:815115/140‑1 (MQ=255)
gATGAGTTGCGACACTTCTTCCTGGTCGTCCCGAGCCTGAGGCGAGGGGGTCAGAACGTTATTCGCTTAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCTTCTCC‑GTTACACCTTTTCCACATTCACaag < 5:716698/138‑1 (MQ=255)
gAGTTTCGCCACTTCTTCCTGGAAGTCCCGCCCCGGGGGCGCGGGGGTGAGACCCGTTGTCGCGGCAAGCCGAATGATATCTTGGGATTTTGAAAACATATTTAGGCTCCGGTGACCCCTTTT‑CACACTAACaaggcg > 4:9542/1‑136 (MQ=255)
ttCGCCAATTCTTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACtt < 7:665900/140‑1 (MQ=255)
tCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACTTa < 7:324244/140‑1 (MQ=255)
gccccACTTCGTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACt < 3:966729/135‑1 (MQ=255)
ggAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGACCGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCt < 1:484227/138‑1 (MQ=255)
ccGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCg < 7:777631/140‑1 (MQ=255)
gcgcCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGTCGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACATGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCg < 5:624482/138‑1 (MQ=255)
gccgggggCGCGGGGGTGAGCCCGTTAGTCGCGGAACGACGAATGATATCTTGGGATTGATAAGCCATATGTCGTCTAC‑GTTAACCCGTTTACACATTCACAATTAAGGAAGTAAAATCCCGCGTCTGCGTGTTGGCa > 4:78992/7‑138 (MQ=255)
ccTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 7:253635/140‑1 (MQ=255)
gcgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACcgacg < 1:181285/138‑1 (MQ=255)
gcgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGaa < 7:82629/140‑1 (MQ=255)
ggggTCAGACCGTTAGTCGCGGAACTACGAATTATATATTGCGATTGATAATACATATGTCGTCTCC‑GTTACACATTTTAAACATTCACAATGAATGAATTAAACTCCGGCGTCTGCTTGTTAGCATCACCGACGAAt > 4:191636/1‑138 (MQ=255)
ggggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACTTACACACCGGCGTCAGCGTGTTCGCATCACCGACGaaa > 5:486889/1‑137 (MQ=255)
ggggTCAGACCGATAGTCGCGGAACGACGAATGATATCATGCGATTGATAAGCCATATCTCGTCTCC‑GTGAAACCTTTTCCACAATCACAAGGAAGGACTTAAACTCCGGCGTCTGCGAGTTCGCAGAACCCACGAAt > 6:907748/1‑138 (MQ=255)
gTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGc < 3:11836/138‑1 (MQ=255)
gTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGc < 3:162571/138‑1 (MQ=255)
tCAGACCGTTAGTCGCGGATCGACGTATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTAGACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGTATGGCg < 2:723466/138‑1 (MQ=255)
tCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACTAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTc < 7:282732/140‑1 (MQ=255)
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CCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCC‑GTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTC > NZ_CP022686/2868614‑2868892
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
