Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F13 I0 R1
|
230 |
5035.0 |
9125430 |
98.4% |
8979423 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,868,753 |
T→G |
14.9% |
T18P (ACC→CCC) |
fdoH ← |
formate dehydrogenase O subunit beta |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,868,753 | 0 | T | G | 14.9%
| 280.2
/ 17.8
| 160 | T18P (ACC→CCC) | fdoH | formate dehydrogenase O subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (24/109); new base G (23/4); total (47/113) |
| Fisher's exact test for biased strand distribution p-value = 3.70e-11 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 170 total aligned reads displayed.
CCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTC > NZ_CP022686/2868614‑2868892
|
ccAATGTTATTGCCGACTGTATCTCGAATGTCGTTCCACTCTGCACACGCCACCTGACAGGCTTTACAGCCGATACAGGTTGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGt < 2:881058/140‑1 (MQ=255)
cAATGTTATTGCCGACGGTATCGCTAATGTCGTTCCCCTCTGAACACGCCACCAGACAGGCTTTACAGCCGCTACAGGAGGTAACGTCGATGACTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGGGCGGGGGTc > 6:74778/1‑140 (MQ=255)
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGGGCGGGGGtg > 5:855804/1‑139 (MQ=255)
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCCCCTGAGGCGGGGGGGtg > 3:317072/1‑139 (MQ=255)
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCCCCGGAGGCGCGGGGGtg > 5:684418/1‑139 (MQ=255)
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCGTCCTGGAAGTCCCCCGCCGGAGGCGCGGGGGtg > 2:408717/1‑139 (MQ=255)
aaTGTTATTGCCGACGGTATCGCGAATGTCGTGCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGt < 8:722227/138‑1 (MQ=255)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCTATGAGTTTCGACACTTCTTCCTGGAAGTCCCCCCCCAGACGCGCGGGGGTGACACCgat > 5:254057/1‑138 (MQ=21)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGtt > 3:111374/1‑140 (MQ=255)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCTCTGGGGCGGGGGGGAGAcccgt > 3:506837/1‑137 (MQ=21)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGGGCGGGGGTGAGACCggt > 1:618792/1‑138 (MQ=25)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCAGCGGGGGGGGGGTGAGACCg > 7:271525/1‑138 (MQ=21)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCATGGATGTCCCGCGCCGGCGGGGGGGGGGGGAGACCGtt > 1:548322/1‑140 (MQ=21)
ttGACGACGGTATCGCGAATGTCGTTCCACTCTGAACAAGACACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGACGATGAGTTTAGCAACTTCTTACTTGAAGTCCCCCGCCAGCCACGCGGGCGTCaacgctgt > 1:696103/1‑133 (MQ=18)
gCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGCGGCGCGGGGGTCAGACCGTTat > 2:913932/1‑139 (MQ=255)
ccGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGGGGCGCGGGGCTAAGACCGTTTGt > 2:703933/1‑140 (MQ=255)
tCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGaa < 7:902898/138‑1 (MQ=255)
tCGCGAATGGCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATCCAGGTGGTAACGTCGATGAGGTTCGCCACTTCTTCCTGGACGACCCGCGCCTGAGGCGCGGGGGGCAGACCGTTAGTCGCGGAacg < 5:391811/140‑1 (MQ=25)
cgcgAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGCGGCGGGGGGGGCCGACCGGTAGTAGCGGGacgc > 3:331393/1‑139 (MQ=21)
gcgAATGTCTGTCCCCTCTGACCAGGCACAGTTACAGGTTTTACTGCCTATACCGGTGGTAACGTTGATTCGTTTCGCCACTTATTCCTGGAAGTCCGGCGCCTGAGGGGCGGGGGTCAGACCGTTAGTCGCGGAacg < 8:563929/138‑1 (MQ=255)
cgAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGGGGCGCGGGGGTCGGCCCGGTTGTAGCGGGacgccg > 6:239274/1‑140 (MQ=18)
taaTGTCTTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGTTACCGGGGGTAAGGTCGATGAGTTGCGCCACTTCTTCCTGGAAGGCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAAcgacga < 1:1043125/139‑1 (MQ=37)
gAATGGCGTTCCACTCTGAACACGCCACCTGACAGCCTTTACACCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAacgac < 7:1023010/138‑1 (MQ=255)
aTGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGGGGCGCCGGGGGGGGGCCGGTAGGGGCGGGacgacgcaa > 3:551794/1‑137 (MQ=18)
tGTCGTTCCACTCTTAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAGGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATg < 6:213875/140‑1 (MQ=255)
gTCGTTCCACTCTGAACACGCCACCTTACAGGCTTTACAGCCGATACTGGTGGTAACGTCGATGAGTTTCGCCCCTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAAt < 8:424112/138‑1 (MQ=255)
cGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGCGGCGCGGGGGTGAGACCCGTAGTAGCGGGACGCCGAATGa > 8:90264/1‑138 (MQ=21)
aCTCTGAACACGCCACCTGACAGGCTTTACAGCCTATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGc < 6:1091995/140‑1 (MQ=255)
ctctGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTg < 7:512298/138‑1 (MQ=255)
ctctGAACACGCACCCTGACAGGCTGTACAGCCGTTACAGGTGGTAACGTCGATGACTTTCGCCACTTCTTCCTGGACGCCCCGCGCATGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCg < 3:339684/140‑1 (MQ=255)
tctGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGa < 2:73489/140‑1 (MQ=255)
gAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCAGGGGCGGGGGGGGCAGCCCGGTAGTCGCGGCTCGACGAATTATATGTTTCGGttt > 5:776377/1‑139 (MQ=21)
ccacGCCACCTGACCGGCTTTACAGCCGATAGAGGGGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:1099938/139‑1 (MQ=255)
ccacGCCACCTGACAGGCTTTACCGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:41561/139‑1 (MQ=255)
ccacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:120954/139‑1 (MQ=255)
acacTCCACCTGACTGTCTTTACAGCCGATTCAGTTTGTAACGTCGAAGAGTTTCTCCACTGATTCCTCGAAGTACCGCGCCTGAGGCGCGGGGGGCAGACCGTTAGTCGAGTAACGAAGAATGATATCTTGCGATTGAt < 5:470876/140‑1 (MQ=255)
acacGCGACCTTACTGGGTTTACAGCCGATACAGGTGGTAACGGCGATGAGTTGCGCCACTTTTACCTGGATGTCCGGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTTAt < 2:588933/140‑1 (MQ=37)
acacGCCACCTGACAGGCTTTACAGCCTATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGTAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 8:35970/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACTGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 5:618615/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACTTATAATAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:449024/140‑1 (MQ=38)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 8:712121/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 2:1078058/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:1023893/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 6:543331/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:351548/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:925964/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTATCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:438164/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGGTTCGCCACTTCTTCCTGGACGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 6:949561/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGGGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCTGTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:281804/140‑1 (MQ=255)
acacGCCACCTCACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGTGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 7:935444/138‑1 (MQ=255)
acacCCCACCTGCCAGGATTTACAGCCTATCCTGGTGGTAACGGCGATGAGTTTCGCCACTTCTGCCTGGAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 7:851084/138‑1 (MQ=255)
gCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGGGGCGCGGGGGGGAGACCGTTAGTAGCGGGACGCCGAATGATATATTGCGATTGATAAGc > 4:232102/1‑140 (MQ=37)
gCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGGGGGGGGGCGGCCGTTAGTGGGGGGACGACGGATGATATATTGCGAATGaaaacc > 3:939175/1‑138 (MQ=21)
cACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGCGCGGGGGTCAGACCGGTAGTAGCGGAGAGAAGGATTATATATTTGGATTTATAAGc > 8:812650/1‑138 (MQ=21)
aagagACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCat < 5:149066/136‑1 (MQ=255)
aCCTGACAGGCTTTACAGCCGATACCGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCat < 3:905382/140‑1 (MQ=255)
ccTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCata < 4:111374/140‑1 (MQ=255)
cTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTGGCGGCACGACGAAAGATATCATGGGATTTAAAAACCataa > 4:667658/1‑139 (MQ=37)
aGGCTTTACAGCCGATACAGGTTGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 4:21432/140‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCAGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 5:824075/140‑1 (MQ=255)
aGGCTTTACAGACTATACAGGTGGTAACGGCGATGAGATTCGCCACATCTTCCTTGAACTCCAGCGCCTGAGGCGCGGGGGTCAGACCGTTAGGCGCTGAACGACGAATGATATCTTGCGATTTATAAGCCATATgtcgt < 2:629490/140‑1 (MQ=255)
ggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgtc < 3:1061349/140‑1 (MQ=255)
gCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGGCTGACCGTTAGTGGCGGAACGACGCATGTTATCTTGGGGTTGATAAGCCCTATgtcgtgg > 1:926965/1‑138 (MQ=37)
gCTTTACAGCAGATACAGGTGGTAACGTCGACGAGTTTCGCCACTTCTTCCTGGAAGGCCCGCGCCGGCGGCGCGGGGGTCAGACCGTTAGGCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 7:873937/138‑1 (MQ=255)
tACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTcc < 7:134989/138‑1 (MQ=255)
aCAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGGGCGGGGGTCAGACCGGTAGTCGCGGAACGACGAAATATATATTTCGATTGTTAAGCCAAATttcgtgtacggt > 2:299785/1‑133 (MQ=255)
cgCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCATCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTac < 3:1131380/139‑1 (MQ=255)
ccGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTacac < 6:96910/140‑1 (MQ=255)
cGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACAcc < 2:554137/140‑1 (MQ=255)
ggtggtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTc < 8:201779/138‑1 (MQ=255)
ggtggtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTc < 7:93519/138‑1 (MQ=255)
gtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGGCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACAtt < 5:180493/140‑1 (MQ=255)
gtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAacg > 4:807587/1‑80 (MQ=255)
gtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAacg < 3:807587/80‑1 (MQ=255)
gtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGGTAGTCGCGGAACGACGAATGATATATTGCGATTGATAAGCCATATTTCGGCTACGGTTCACCGTTTAcacaat > 4:883681/1‑138 (MQ=255)
cGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTcaca < 6:94209/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGACGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTATCCACATTCACaagga < 2:1135017/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGGGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 3:999797/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 3:23456/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 5:486897/140‑1 (MQ=255)
taGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaaggaagg < 1:775821/139‑1 (MQ=255)
ttcttcCTGGACGTCCCGCGCCTGAGGGGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCg < 1:792892/140‑1 (MQ=255)
ttcttcCGCGCAGTCCCGCGCCTGAGGCGGGGGGGTCAGACCGTTAGTCGCGGAACGCCGAATGATATCTTTCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc < 8:995108/138‑1 (MQ=255)
tGGACGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGAAGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTc < 7:733377/138‑1 (MQ=255)
ggAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGc < 4:333164/140‑1 (MQ=255)
ccGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGtt < 7:575335/138‑1 (MQ=255)
ccGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCg < 1:475363/140‑1 (MQ=255)
cgcCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGc < 8:338221/138‑1 (MQ=255)
cgcCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGc < 8:895696/138‑1 (MQ=255)
cgcCGGAGGCGCGGGGGTCAGACCGTTAGTCGAGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCAt < 4:62391/140‑1 (MQ=255)
ccTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCAt < 7:343947/138‑1 (MQ=255)
ccTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 2:394482/140‑1 (MQ=255)
gcgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCTTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGGCTGCGTGTTCGCATCACCGACGaa < 3:289979/140‑1 (MQ=255)
gcgGGGGTCAGACCGTGAGTCGCGGAACGAAGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAATGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGaa < 1:520376/140‑1 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAAt > 4:481884/1‑140 (MQ=255)
gggggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGGTACCCCTTTTCCACATTCACCAGGCAGGACTTAAACTCCGGCGTCTGCGGGTTCGCATCCCCGACGaa > 8:830135/1‑138 (MQ=255)
ggggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAATGCAGGACTTAAACACCGGCGTCTGCGTGTTCGCATCACagacgcaatg > 6:1012837/1‑135 (MQ=255)
tCATACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTc < 3:667658/140‑1 (MQ=255)
tCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTc < 5:1049139/140‑1 (MQ=255)
tCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTc < 1:142677/140‑1 (MQ=255)
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CCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTC > NZ_CP022686/2868614‑2868892
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
