Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F35 I0 R1
|
304 |
9232.4 |
10623078 |
98.3% |
10442485 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,868,753 |
T→G |
11.6% |
T18P (ACC→CCC) |
fdoH ← |
formate dehydrogenase O subunit beta |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,868,753 | 0 | T | G | 11.6%
| 401.4
/ 13.9
| 209 | T18P (ACC→CCC) | fdoH | formate dehydrogenase O subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (27/152); new base G (26/3); total (53/156) |
| Fisher's exact test for biased strand distribution p-value = 2.47e-15 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 215 total aligned reads displayed.
CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTC > NZ_CP022686/2868615‑2868892
|
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGCGCGGGGGtg > 8:252461/1‑139 (MQ=255)
aaTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACTGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCa < 7:239640/140‑1 (MQ=255)
aaTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGATTTACAGCCGATACAGGTGGTAACGTCGATTAGTTTCGCCACTTCTTCATTGAAGTACCACGCCTGAGGATCGGGGGtga > 6:337044/1‑138 (MQ=21)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGCGGCGCGGGGGGCAGAccagt > 2:861460/1‑137 (MQ=255)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGtt > 2:87554/1‑140 (MQ=255)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCAGACGCGCGGGGGTGAGACCggt > 8:659232/1‑138 (MQ=255)
gCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGGCCGCCCGtt > 4:1008161/1‑138 (MQ=255)
gCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCCCCCGAGGCGCGGGGGGCCGACCggt > 3:723512/1‑136 (MQ=21)
ccGACGGTATCGCGAATTGCGTTCCACTCTGACCACTCCACCTGCCAGGCTTTACAGCCGATTACGGTGGTAAGGTAGATGATTTTCGCCACTTCTTCCTGGACGTCCCGCTCCTGAGGCGCGGGGGTCAGACCGTTAGt < 6:1941/140‑1 (MQ=255)
ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCCGCCGCGGGGGGGGGAGACCCTTaatagccg > 7:936714/1‑133 (MQ=18)
ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCATGGAAGTCCCGCGCCGGAGGGGCGGGGGGCGGACCGGTAGTcgg > 4:613022/1‑137 (MQ=21)
gTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGa < 2:626935/140‑1 (MQ=255)
tCGCGAATGTCGTTCCCCTCTGAACACGCCAACCGAGCTGCGTTACAGCCGTTTCCGGGTGTAACGTCGATGAGTTTCGTCCCTTATTCCTGGAAGTCCCGCGGCGGCGTCGCGGGGGTCAGACCGTTTGTCGCGGAacg < 6:707788/140‑1 (MQ=255)
gAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACCGGTGGTAACGTCGATTATTTGCGCCACTTCTTCCTGGAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAAcgacga < 5:378989/140‑1 (MQ=37)
cgTCGTTCCACGCTGACCACGCCACCTGCCAGGCTTTACAGCGGATACATGTGGTAACGGCGATTAGTTTCGCCACTTCTTCCTGGAAGCCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGaa < 4:866292/137‑1 (MQ=255)
gTCGTTACACTCTGAACACGCCACCTGACAGGCTTTACATCCGATACAGGTTGTAACGTCTATGAGTTTAGCCACTTCTTCCTGGAAGTACCGCGACTGAGTCGCGGGGGTCAGACCGTTATTATCGTCACGCCGAATGa > 8:324575/1‑140 (MQ=21)
ccACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGGGGGGCGGGGGGGAGCCCGGTTGTCGCGGCACGCCGCATGattta > 3:512562/1‑135 (MQ=18)
ctctGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGCGGGCGCGGGGGTCAGCACCATAGTCGCGGAACGACGAATtataaatttgg > 5:112377/1‑133 (MQ=21)
ctGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGGCCGCCCGTTAGTCGCGGCACGACGAATGATATCTTGCg > 4:65302/1‑138 (MQ=37)
tGAACACGCCACCTGCCAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGCGCGGGGGTCAGACCGGTAGTCGCGGACGGCCGAAATGTATATTGCGaag > 8:862796/1‑138 (MQ=21)
ccccGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGGCGAGGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:231907/137‑1 (MQ=255)
ccacGCCCCCTGACAGGCTTAACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGATGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 8:1083582/139‑1 (MQ=255)
ccacGCCACCTTACAGGATTTCATGCCGATACTGGTGGTATCGTCGTTGAGTTTCGCCACTTCTTCATGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGATCGACGAATGATATCTTGCGATTGAt < 7:524780/139‑1 (MQ=255)
ccacGCCACCTGACAGGCTTTACAGCCGATACAGGTTGTTACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGAGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 3:34005/137‑1 (MQ=255)
ccacGCCACCTCACAGGCTTTACAGCCGATACTGGTGGTAACGTCGATGCGTTTCGCCACTTCTTCCTGGACGGCCCGCGCCGGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 3:448512/137‑1 (MQ=37)
ccacCCCACCTGACCGGCTTTACAGCAGATACAGGTGGTAACGTCGATTAGTTTCGCCACTTCTTCCTTGAAGTCCCGCGCCTGCGGCGCGGTGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 7:718038/139‑1 (MQ=255)
acactacACCTGACAGGCGTTACAGCAGATAAATGTGTTAACGTCGCTGATTTTCGCCACTTCGTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 3:363617/132‑1 (MQ=255)
acacGCCTCCTTACAGGAGTTACAGCCTATTCATGTGGTAACGTAGATGTGTTTCGCAACTGGTTCCTGGAAGTGCCGCGCCTGAGGGGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 7:834389/140‑1 (MQ=255)
acacGCCTCCTGACAGGCTTTACTGAGGTTAGCGGTGGTAAGGTCGATGAGTTTCGCGAGTGCTTCCTGTTAGTCCCGCGCCTTTGGATCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 4:918246/138‑1 (MQ=255)
acacGCCCCCTTACAGGCTTTACCCCAGATACAGGTGGTAACGTCGATCAGTTTCGTCACTTATTCCTGGAAGTCCCGCGCTTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 5:1217625/140‑1 (MQ=255)
acacGCCCCCTCACAGGCTTTACAGCCGATACAGGGGGTAACGCCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 5:552396/140‑1 (MQ=38)
acacGCCACCTGACAGGCTTTCCAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 4:631054/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTCCAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGGCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:1218283/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACCGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:1164027/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACTGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 4:434104/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACTGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 6:962259/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 6:541564/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 6:126165/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 2:1182246/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 8:1052632/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 8:821962/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACCACGAATGATATCTTGCGATTGAt < 2:712070/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 4:450109/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCAGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 2:488312/140‑1 (MQ=255)
acacGCACCCTGACCGGCTTTACAGCCGATACAGGTGTTAACGTCGATGAGTTTCGCCACTTCTTCCTGTAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:1157204/140‑1 (MQ=38)
cacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGGGCGGGGGTCCGACCCTTAGTAGCGGAACGACGAATGATATCTTGAGATTGa > 3:1090989/1‑138 (MQ=25)
gCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTACCCCCCCGGAGGCGCGGGGGTAAGACACTTATTAGCGGAACGACGAATTATATATTTAGATTGATAAGc > 6:459027/1‑140 (MQ=21)
aCCTGACAGGCTTTACCGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGACGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCat < 8:161025/140‑1 (MQ=255)
aCCTGACAGGCTTTACAGCCGTTACTGGTGTTAATGTCGATTAGTTTCGCCAGTTCTTGCTGGAAGTCCCGCGGCTGAGGCGCGTTGGTCAGAGCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATATGcc < 4:738860/138‑1 (MQ=37)
tggCTTTACAGCCGATACAGGGGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 1:1137661/139‑1 (MQ=255)
cggctgaacacCCGATACAGGTGGTAACGGCGATGAGTTGCGCCACTTCTTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 1:720159/133‑1 (MQ=255)
cggCTTTACAGCCGTTACTGGTGGTAACGTCGATGAGTTTAGCCACTTCTTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 3:935219/137‑1 (MQ=255)
cggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 1:1302222/139‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 3:749641/138‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCGGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 8:281227/140‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACCTCTTCCTGGAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 2:996063/140‑1 (MQ=255)
ggCTTTCCAGCCGATTCAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgtc < 2:352564/140‑1 (MQ=255)
ggCTTTACAGCCGTTACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcg < 4:1129974/138‑1 (MQ=255)
ggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCGTATgtcgtc < 2:407502/140‑1 (MQ=255)
ggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgtc < 6:798456/140‑1 (MQ=255)
ggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgtc < 2:152707/140‑1 (MQ=255)
ggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgtc < 2:211480/140‑1 (MQ=255)
ggCTCTACAGCCGATCAAGGTGGTAACGTCGCTGAGTATCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGCCCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcg < 4:998417/138‑1 (MQ=255)
gatttACAGCCGATACAGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGTAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGtct < 1:1080831/138‑1 (MQ=255)
tACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGt < 5:1058140/140‑1 (MQ=255)
cAGCCGATACAGGTTGTAACGTCGATGAGTTTCGCCACTTCATCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGGCGTCTCCGTTa < 7:746445/140‑1 (MQ=255)
aGCCTATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGCAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTac < 7:762501/140‑1 (MQ=255)
taTACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCt < 1:765036/139‑1 (MQ=255)
tACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCCCCGGAGGCGCGGGGGGGAGACCGGTAGGCGGGGAACGACCTAAGTTATCTGGGGATTGGGAAACCATATCTCGTATCCGTTTCAccg > 4:74960/1‑137 (MQ=255)
ggtggtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCca < 5:893965/140‑1 (MQ=255)
ggtAACGTCTATGAGTTTCGCCCCTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGAACGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACATTTTCcac < 4:1110817/138‑1 (MQ=255)
ttAACGTCGATGATTTTCGCCACTTCTTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACAtt < 7:1228438/139‑1 (MQ=255)
cGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTcaca < 8:753255/140‑1 (MQ=255)
taTGAGATTCTCAACTTCTTCCTGGAAGTCCGGCTCCTGAGGAGCGTGGGGCAGACCGTTAGTCGCGGAACGACGAATGATATCTTTCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 7:644581/139‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTTAGGCGCGGGGGTCAGACCGTTAGTCGAGGAACGACGAATGATATCTTGCGATTGATAAGCCATATTTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 8:833940/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaag < 4:404494/138‑1 (MQ=255)
gATGAGTTTCGACACTGCTTCCTGGAAGTCCCGCGGCTGAGGCGAGGGGGTCAGACCGTTATTCGCTGAACGACGAATGATATCTTGCGATTGAAAATCAATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 8:717299/140‑1 (MQ=255)
gATGAGTTGCGCCACTTCTTCCTGGTCGTCCCGCTGCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATTTGTCGTGTCCGTTACACCTTTTCCACATTCACaagga < 5:1079519/140‑1 (MQ=255)
tCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTa < 1:87554/140‑1 (MQ=255)
ctccACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGAACGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATATGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTaa < 5:308008/138‑1 (MQ=255)
acatattcCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc < 1:92441/135‑1 (MQ=255)
acagcttcCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc < 1:98987/136‑1 (MQ=255)
ttcttcCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCg < 6:497787/140‑1 (MQ=255)
cttcCTGGACGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGACGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGc < 6:744428/140‑1 (MQ=255)
cttcCTGGAAGTCCCGCGCCTGAGGCGCGGGGGGCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGAATGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCg < 4:1264168/138‑1 (MQ=255)
cTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCt < 2:756623/140‑1 (MQ=255)
tCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGtt < 6:1045727/140‑1 (MQ=255)
cgcgTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCAt < 5:763019/140‑1 (MQ=255)
ccggAGGCGCGGGTGTCAGACAGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCAGATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 2:252156/137‑1 (MQ=255)
ccTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCAt < 4:4645/138‑1 (MQ=255)
ccTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCAt < 3:125917/138‑1 (MQ=255)
ggCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACGTTTTCCACAGTCACAAGGAAGGACGTAAACACCGGCGTCTGCGTGTTAGCAACACcgac > 7:1248436/1‑140 (MQ=255)
gcgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACcgacg < 4:1303050/138‑1 (MQ=255)
gcgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGaa < 7:266836/140‑1 (MQ=255)
gcgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGGCTGCGTGTTCGCATCACcgacg < 4:330229/138‑1 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGACCGACGAATGATATCTTGCGATTGATAAGCCAGATGTCGTCTCCGGTACACCGTGTCCACATTCTCCAGGAAGGACTTAAGCTCCGGCGTCTGCGGGTTGGGAACACCGGCGCAt > 2:1322201/1‑140 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTTCCCCGTTTCCACAGTCCCAAGGAAGGACGTAAACAGCGGCGTCTGGGTGGTGGCATACCCGACGAAt > 5:209488/1‑140 (MQ=255)
ggggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCCGAGTCTGCGTGTTCGCATCACCGACGAATgg > 8:1153506/1‑140 (MQ=255)
ggggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTACACATTAACAAGGAAGGAATAAAACTCCGGCGTCTGCGTGTTCGCATCCCCGACGAATgg > 2:1371059/1‑140 (MQ=255)
gTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGt < 1:476080/140‑1 (MQ=255)
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CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTC > NZ_CP022686/2868615‑2868892
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
