Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F12 I0 R1
|
158 |
5737.7 |
7407908 |
98.3% |
7281973 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,868,753 |
T→G |
12.5% |
T18P (ACC→CCC) |
fdoH ← |
formate dehydrogenase O subunit beta |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,868,753 | 0 | T | G | 12.5%
| 323.3
/ 14.5
| 165 | T18P (ACC→CCC) | fdoH | formate dehydrogenase O subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (21/120); new base G (20/4); total (41/124) |
| Fisher's exact test for biased strand distribution p-value = 5.67e-11 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 172 total aligned reads displayed.
CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCG > NZ_CP022686/2868615‑2868890
|
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCAGGGGtg > 2:671025/1‑139 (MQ=255)
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCCGAGGCGCGGGGGtg > 5:468268/1‑139 (MQ=255)
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCTTAGGCGCTGGGGtg > 1:561201/1‑139 (MQ=255)
aaaTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTc < 3:52555/139‑1 (MQ=255)
aTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGtg > 8:507998/1‑137 (MQ=255)
aTTGCCTACTGTATCGCTAATGTGGTTACACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATAACGTTGGTAACGGCGAGGAGTTTCGCCACTTCTTCCTGGAAGTCCCTCGCCGGAGGCGCGGGGGTCAGAcc < 8:690352/138‑1 (MQ=25)
ttGCCGCCGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGCCCCGCCCCGGGGGCGCGGGGGGCCGAcccgt > 1:359190/1‑137 (MQ=21)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGGGGGGGGCAGCCCCtt > 6:352767/1‑140 (MQ=255)
gCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACCGGCTTTACAGCCGATAAAGGTGGTAACGTCGATTAGTTTCGCCACTTCTTCCTGGAAGTACCCCCCCCGCGGCGCGGGGGGCCGACCCtt > 8:563691/1‑138 (MQ=255)
gCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGACACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTGAGACCCtt > 7:878871/1‑138 (MQ=255)
ccGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGGCAGAGGCGCGGGGGGCAGGACCTTAGt > 3:939004/1‑140 (MQ=21)
aCGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCCCCGGAGGGGCGGGGGGGGGACCGGTAGTcgg > 1:628446/1‑139 (MQ=21)
gggcgAATGGCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGATGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAacg < 5:621565/138‑1 (MQ=255)
ccgcgAATGTCGTTCCACTCTGAACACGCAACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAacg < 2:858494/139‑1 (MQ=255)
cgcgAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAacga < 2:870294/140‑1 (MQ=255)
gAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAAcgacga < 4:617085/140‑1 (MQ=255)
gTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCTGAGGCGCGGGGGGCAGCCCGGTAGTCGCGGAACGACGAATGa > 2:502111/1‑140 (MQ=255)
ttCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGCGGCGGGGGGGGCCCCGTAGAGGCGGGACCACGAATGatata > 3:604846/1‑139 (MQ=18)
tctGAACACGCCACCTGACAGGCTTTACCGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGa < 5:343428/140‑1 (MQ=255)
tctGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGGGGCGCGGGGGTGCGCCCGGTTGTAGCGGGACGCCGAATTATATATTTCGa > 6:181996/1‑140 (MQ=21)
gAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGGGAGGCCGGTAGTAGCGGAACCAAGAAATATATATTTCGAttt > 2:69651/1‑139 (MQ=21)
aaCACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGGGGCGCGGGGGTCAGGCCCTTAGGAGCGGGCCGCCGTATGTTTTCTTGCGAGTgg > 3:799920/1‑139 (MQ=21)
ccacGCCACCTGACCGGCTTTACAGCCGATACAGGTGGTAACGTCGATGCGTTTCGCCACGTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 5:752524/139‑1 (MQ=255)
ccacGCCACCTGACCGGCTGTACAGCCGATACAGGTGGTAACGTCGATGAGATTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGAACGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 3:681104/139‑1 (MQ=255)
ccacGCCACCTGACAGGCTTTACCGCCTATACCGGTGGTAACGTCGATCAGTTGCGCCCCTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 7:44658/137‑1 (MQ=38)
acccGCCACATGACAGGCTTTACAGCCGATACAGGTGGTAACGTGGATGAGTTTCGCCACTTCTTCCTGGCTGGCCCGCGCCCGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 3:802250/137‑1 (MQ=37)
acagGCCACCTGACAGGCTTTACAGCCGTTAGAGGTGGTAACGTCTATGAGTTTCGCCACTTGTTCCTGTAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGTACGACGAATGATATCTTGCGATTg < 7:617916/138‑1 (MQ=37)
acacTCCACCTTACAGGCTTAACAGCCGATACAGGTGTTAACGTCGATGATTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 5:316228/140‑1 (MQ=255)
acacGCCACCTGACCGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 2:816562/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACTGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 8:837029/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 5:201688/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 6:543785/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:567629/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:124914/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCAGGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 5:888769/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGGCGATGAGTTGCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:351005/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGGGGTAACGTCGATGCGTTTCGCCACTTCTTCCTGGAAGACCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGAGGAACGACGAATGATATCTTGCGATTGAt < 4:656445/140‑1 (MQ=255)
acacCCCACCTGACCCGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 7:711102/138‑1 (MQ=255)
cacCCCACCTGACAGGCTTTACAGCCGATACCGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGa < 7:250109/138‑1 (MQ=255)
cGCCACCTGACAGCCTTTACAGCCGATACTGGTGGTAACGTCGATGAGGTTCGCCAATTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAg < 3:632195/140‑1 (MQ=255)
gCCCCCTGAGAGGCGTTACAGCCGATACAGGTGGTAAAGGCGATGAGTTGCGCCCCTTCTTCCGGGAAGGCCCGCGCCGGAGGCGCGGGGGGCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGAGTGATAAGc < 2:258113/140‑1 (MQ=255)
gCCCCCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGGTTCGCCACTGCTTCCTGGAAGTCCCGCGCCTGAGGCACGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATaa < 8:280443/138‑1 (MQ=255)
gCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTTGTGGCGGAACGACGAATTATATATTGGGATTGATaatc > 6:698726/1‑138 (MQ=37)
aCCTGACATGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCat < 5:385862/140‑1 (MQ=255)
aCCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGGGGCGCGGGGGGGAGACCGGTAGTCGCGGAACGGCGAATGATATCTGGCGATTGATAAGCCaa > 2:589049/1‑139 (MQ=37)
cTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCAGAGGCGCGGGGGTCAGACCCTTATGAGCGGAAAGAAGAATAATAAATTTCGATTGATAAGCCaaaa > 6:51589/1‑137 (MQ=25)
tGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATg < 2:229042/140‑1 (MQ=255)
tGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATg < 1:452527/140‑1 (MQ=255)
aCAGGCTTTACAGCCGATACTGGTGGTAACGTCGATGAGTTGCGCCACTTCTTCCTGGCAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 6:482166/140‑1 (MQ=255)
tggCTTTACTGCCGTTACAGGTGGTATCGTCGATGTGTTTCGCCTCTTCTTCCTGGATTTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 1:84162/139‑1 (MQ=255)
ggtcTTTACAGCGTATACTGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCGTGGAAGGCCCGCGCCTGCGGCGCGGGGGGCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 7:404665/135‑1 (MQ=255)
ccgCTTTACCGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTGCTTCCTGGATGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 1:225680/138‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGCGGCGCGGGGGGCAGACCGGTAGTCGCGGGACGCCGAATGAAATATTGCGCTTGATAATCCCTATgta > 8:71115/1‑137 (MQ=37)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 3:766856/140‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTAGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 5:367276/140‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGGAACGTCGCTGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 3:51877/140‑1 (MQ=255)
ggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTAGCCACTGCATCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcg < 8:61405/138‑1 (MQ=255)
gCTTTACAGCCGATACAGGTGGTAACGTCGATGCGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 8:459265/138‑1 (MQ=255)
gCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGtct < 5:305026/140‑1 (MQ=255)
ttACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTGCCCCGCCGGAGGCGCGGGGGGACGGCCGGTAGGAGCGGACCGGCGGATGATTTTGTGCGGTTGATAAGCGCTATTTAGTCTGCg > 6:747440/1‑140 (MQ=16)
ccGATACAGGTGGTAACGTCGAGGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTacac < 6:55022/140‑1 (MQ=255)
ccGATACAGGGGGTAACGTCTATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTac < 8:156513/138‑1 (MQ=255)
ggtggtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCca < 1:832176/140‑1 (MQ=255)
ggtggtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCca < 6:512429/140‑1 (MQ=255)
ggtggtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGGCGTCTCCGTTACACCTTTTCca < 4:642291/140‑1 (MQ=255)
ggtAACGTCTATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACAt < 6:906842/140‑1 (MQ=255)
aacggtgATGAGTTTCGGCACTTCTTCGTGGAAGTGCCGCGCCTGAGGCGGGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTca < 1:124573/134‑1 (MQ=255)
cGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCTGGGGCGCGGGGGGCAGACCCGTTGTGGCGGCACCACCCATGATATCTTTGGATTGATAAGACATATGTCGGGTCCGGTTCACAGTTTCCACATTAACaagg > 4:839313/1‑140 (MQ=255)
taTGAGGTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 1:930261/139‑1 (MQ=255)
gaggAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaag < 8:6941/135‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCGTGAGGCGCGGGGGTCAGACCTTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaag < 7:351389/138‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGTAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 4:88672/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 4:280188/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 2:780547/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 5:891031/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 3:272068/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 4:662588/140‑1 (MQ=255)
gATGAGTATCGCCACTTCTTGCTGGAAGTCCCGCGCGTGAGGCGGGGGGGTCAGACCGTTAGTCGCTGAACGACGAATGATATCTTGCGATTGATAAGCCTTATGTCGTCTCCGTTACACCTTTTCCACATTCACaag < 8:236288/138‑1 (MQ=255)
tGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaaggaag < 1:705778/140‑1 (MQ=255)
tGAGTTTCGCCACTTCTTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaaggaag < 2:405576/140‑1 (MQ=255)
tGAGTTTCGCACATTCTTCCTGGAAGTCACGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaaggaag < 5:176045/140‑1 (MQ=255)
ttCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACtt < 1:671727/140‑1 (MQ=255)
ttCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACtt < 3:532688/140‑1 (MQ=255)
ttCGCCACTTCTTCCTGGAAGTCCCCCGCCGGCGGGGCGGGGGGGCGCCCGTTTGTAGCGGCACGTCCATTGATATATTGGGCTTTATATGCCATATTTAGTGTACGTTTAACCATTTGAAACTTAAAaaggaagggcat > 6:705900/1‑136 (MQ=255)
cttcGTGGAAGGCCCGCGCCGGAGGCGCGGGGGTCAGTCCGTTAGTCGCGGTACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCg < 7:196262/138‑1 (MQ=255)
tcCTGGAAGTCCCGCTCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGc < 8:127049/138‑1 (MQ=255)
gcccGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGtt < 3:378383/139‑1 (MQ=255)
gcccGCGACTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCgtg < 7:168842/137‑1 (MQ=255)
gcacgcgCCAGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGGCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGtt < 3:714644/137‑1 (MQ=255)
ccTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 6:271564/140‑1 (MQ=255)
catGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 6:283277/138‑1 (MQ=255)
gcgGGGGTCAGAGCGTTAGTCGCTGATCGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGGCTGCGTGTTCGCATCACCGACGaa < 4:20658/140‑1 (MQ=255)
gcgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACcgacg < 7:168777/138‑1 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:790888/51‑1 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt > 2:790888/1‑51 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCCTCACCGACGAAt > 5:535780/1‑140 (MQ=255)
ggggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc > 7:759751/1‑107 (MQ=255)
ggggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc < 8:759751/107‑1 (MQ=255)
ggggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATgg < 5:789266/140‑1 (MQ=255)
tCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCg < 7:881927/138‑1 (MQ=255)
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CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCG > NZ_CP022686/2868615‑2868890
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
