Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F2 I0 R1
|
233 |
6461.8 |
9239822 |
98.3% |
9082745 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,868,753 |
T→G |
8.6% |
T18P (ACC→CCC) |
fdoH ← |
formate dehydrogenase O subunit beta |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,868,753 | 0 | T | G | 8.6%
| 305.4
/ 6.9
| 146 | T18P (ACC→CCC) | fdoH | formate dehydrogenase O subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (17/114); new base G (12/3); total (29/117) |
| Fisher's exact test for biased strand distribution p-value = 1.32e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 154 total aligned reads displayed.
CCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTC > NZ_CP022686/2868614‑2868892
|
cattGTTATTGCCGACGTTATCGCGAATGTCGTTCCACTCAGAACACGCCACCTGACAGGCTTTACTGCCGATACAGGTTGTAACGTCGATTAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTc < 2:275353/137‑1 (MQ=25)
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACATGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGATGCGCGGGGGtg > 4:635693/1‑139 (MQ=255)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGtt < 2:1168105/140‑1 (MQ=255)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCCCCGGGGGCGCGGGGGGCAGACCggt > 2:8305/1‑138 (MQ=25)
ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGACGATACAGGTGGTAACGTCGATGAGTTTCGCCACATCTTCCTGGAAGTCCCCCGCCAGAGGCGCGGGGGGCCGACCCtt > 1:855896/1‑140 (MQ=25)
gCCGACGGTATCGCTAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGCGGCGCGGGGGTCCGAcctgg > 5:673794/1‑135 (MQ=21)
aCGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTcgc > 2:887485/1‑140 (MQ=255)
aCGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCCGGGGCGCGGGGGTCAGACCGATAGgcgc > 8:174907/1‑140 (MQ=255)
cGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCCCCCGAGGCGCGGGGGGGAGACCGGTATTggcg > 3:736578/1‑140 (MQ=21)
gTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGa < 8:560986/140‑1 (MQ=255)
gTATCGCGAATGTCGTGCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGACGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGa < 2:1196565/140‑1 (MQ=255)
tATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGCGCCGGGGGGAGCCCCGTAGTCGCGGaa > 2:507050/1‑140 (MQ=21)
tATCGCGAATGTCATTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGaa < 1:279416/140‑1 (MQ=255)
tCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGaa < 5:365002/138‑1 (MQ=255)
gcgcgAATGTCGTTCCACTATGAACACGCCACCGGACAGGCGTTACAGCCTATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGaa < 6:927035/137‑1 (MQ=255)
cgAATGTCGTTCCACTCTGAACACGCCACCTGACAGGC‑TTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCCGCGAGGGCCCGGGGGGCACACCGGTACTCGCCGAaccgcca > 8:268886/1‑135 (MQ=18)
aaTGTCGTTCCACTCTGACCACGCCCCCTGACAGGCTTTACAGCCGATCCAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGaa < 2:1053308/140‑1 (MQ=255)
tGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATg < 2:380328/140‑1 (MQ=255)
gTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCCCCGGAGGCGCGGGGGGGAGGCCCGTAGTGGCGGGAcgacgacatt > 7:715655/1‑136 (MQ=18)
gTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGCGCGGGGGTCCGACCCTTTGTGGCGGAACGACCAATgt > 8:975034/1‑139 (MQ=21)
cGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCAGCGGCGGGGGGGTGAGACCGGTAGTCGCGGGACCACGAAtaa > 6:492456/1‑136 (MQ=21)
cctctGAACACGCCACCTGCCAGGCTTTACAGCGGATACAGGGGGTAACGTCGATGAGTATCGCCACTTCTTCCTGGACGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGc < 8:306950/139‑1 (MQ=255)
aCTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACCGGTGGTAACGTCGATTCGTTGAGCCACTTCTTCCTGGAAGTCCCGCGCATGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGc < 4:592224/140‑1 (MQ=38)
aCTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAGGAGTTTCGCCACTTCTTCCTGGCAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCtt < 6:71195/138‑1 (MQ=255)
ctctGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCg < 3:49534/140‑1 (MQ=255)
ctctGAACACGCCACCTGACAGGCTGTAGAGCCGATACAGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCg < 2:861420/140‑1 (MQ=255)
ccacGCCACCTGCCAGGCTTTACAGCCGATACAGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 8:397688/139‑1 (MQ=255)
ccacGCCACCTGACTGTCTTTCCAGCCGATACCGGTGGTAACTTCGATGTGTTTCGCCACTTCTTCGTGGACGTCCCGCGCCTGAGCCGGGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:772203/139‑1 (MQ=255)
ccacGCCACCTGACAGGCTTTACCGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:460728/139‑1 (MQ=255)
cagcGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 3:900909/137‑1 (MQ=255)
acccGCCACCTGACCGTCTTTACAGCCGATACTGGTGGTAACGTCTTTGAGTTTCGCCTCTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 3:62563/137‑1 (MQ=255)
acacTCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTGCGCCACTTCTTCCTGGAAGTCCCGCGCCTGATGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:902391/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACATCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:464143/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:1026759/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 2:139397/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 3:204073/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:1173441/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 2:1011860/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:907323/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCAACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 5:902082/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTGTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 6:914053/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGGTTCGCCACTTCTTCCAGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 1:73670/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAGGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 6:720854/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGAATCGTTTCGCCACTTCATCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:1066147/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGGCGCGGAACGACGAATGATATCTTGCGCTTg < 5:973363/138‑1 (MQ=255)
acacGCCACCTGACAGGATTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 3:561336/140‑1 (MQ=255)
acacGCCACATGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 6:364690/138‑1 (MQ=255)
aaaccccACCTGACTGGCTTTAGAGCAGATACAGGTGTTAACGTCGATTTGTTTCGCCTGTTCTTCCTGGAAGTCCCGCGGGTGAGGCGCGGGGGTCAGACCGTTAGTCGAGGAACGACGAATGATATCTTGCGATTTAt < 8:362813/135‑1 (MQ=255)
ccGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGGCGATGTGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATaa < 1:467087/139‑1 (MQ=255)
cTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCatat < 4:524111/140‑1 (MQ=255)
gACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTGCCCCGCCGGGGGCGCGGGGGGGCGACCGTTTGTGGCGGCCCGCCGCCTGATATCGTGCGGTTGATAATCCagat > 6:111424/1‑138 (MQ=16)
aGGCTTTACTGCCGATACAGTTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 4:810483/140‑1 (MQ=255)
aGGCTTTACAGCCGATCCAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 1:333150/140‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTTGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGAGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 8:1001332/140‑1 (MQ=255)
ggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgtc < 8:676093/140‑1 (MQ=255)
gCTTTACAGCCTATACAGGTTGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGtct < 7:761753/140‑1 (MQ=255)
gCTTTACAGCCGATAGAGGTGGTATCGTCGTTGTGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGGGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 5:102244/138‑1 (MQ=255)
ccTTTACAGCCGATACAGGTGGTAACGGCGATTAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGACTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGtct < 7:286314/139‑1 (MQ=255)
aGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCCCTTCTGCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTac < 1:745285/140‑1 (MQ=255)
aGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTac < 2:250443/140‑1 (MQ=255)
gATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGAGGGGCGGGGGGGCGACCGGTAGTCGCGGAACGACGCAATATATATTTGGCTTTATAATCCAAATGTGGTATACCGTTaacca > 4:124417/1‑136 (MQ=255)
aGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTcc < 8:587359/140‑1 (MQ=255)
ggtggtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCca < 4:727463/140‑1 (MQ=255)
aaCGTAGTTGAGTGTCGCCACTTCTTCCTGGAATGCCCGCGCCTGAGGCGCGGGGGTCAGACCGGTAGTCGCGTAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACAtt < 6:192902/138‑1 (MQ=255)
gctGAGTTTCGCCACTTCTTCCGGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATCTGTCGTCT‑CCGTTACACCTTTTCCACATTCACaagga < 4:88571/138‑1 (MQ=255)
gatgatTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCATGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACaag < 5:422323/138‑1 (MQ=255)
gATTAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGGCGCGGAACGACGAATGATATCTTGCGATTGATAAGACATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACaagga < 7:520480/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCGTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACaagga < 3:960436/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACaagga < 3:300876/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACaagga < 3:1052829/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACaagga < 3:295561/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGAGTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACaagga < 8:1058713/140‑1 (MQ=255)
tGAGTTTCGCCACTGCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACaaggaag < 7:474448/140‑1 (MQ=255)
ttCGCCACTTCTTCCTGGAAGGCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACtt < 3:1056729/140‑1 (MQ=255)
atttcttcCTGGTAGTCGCTCGCCTGAGGCGCGGGGGTCAGACCGTTTGTCGCGGAACGTCGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCAACATTCACAAGGAAGGACTTAAAc < 5:183800/136‑1 (MQ=255)
aCTTCTTCCTGGAAGTCCCGCGCCTGAGTCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc < 2:47602/140‑1 (MQ=255)
aCTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc < 2:259988/140‑1 (MQ=255)
caGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTAGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCgt < 4:1135411/139‑1 (MQ=255)
aGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCgtg < 1:182436/140‑1 (MQ=255)
cgcCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGc < 5:78664/138‑1 (MQ=255)
ccTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 3:733382/140‑1 (MQ=255)
tgtggCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 5:672934/135‑1 (MQ=255)
gAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCAccc > 4:1067411/1‑139 (MQ=255)
ggCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAAAAGACATAGGTCGTCT‑CCGTTACACCATTTCCCCAATCACCACGAAGGACTTAAACTCCGGCGTAAGCGTGTTAGCATccccc > 6:538969/1‑137 (MQ=255)
cgagggggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACcgac < 6:1111566/135‑1 (MQ=255)
gcgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGaa < 3:225371/140‑1 (MQ=255)
gcgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGaa < 1:1199210/140‑1 (MQ=255)
ggggggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACcgacga < 6:177585/137‑1 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACcgacga < 6:1000923/138‑1 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACcgacga < 6:983679/138‑1 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAAt < 7:905451/140‑1 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAAt > 4:638594/1‑140 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGGTACCCCTTTTCCACATTCACAAGGAAGGCCTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAAt > 1:376071/1‑140 (MQ=255)
cgGGGGTAAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGAGTTAAAATCCGGCGTCTGCTTGTTCGCATCACCGCCGAAt > 2:654754/1‑140 (MQ=255)
gggggTCAGACCGTTAGTCGAGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACGTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATg < 2:893549/140‑1 (MQ=255)
ggggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATgg > 1:107587/1‑140 (MQ=255)
gTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGc < 5:278971/138‑1 (MQ=255)
tCAGACCGTTTGTCGAGGAACGACGAATGTTATCTTGAGATTGATAAGCGATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACATGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTc < 4:696069/140‑1 (MQ=255)
tCAGACCGTTCGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGGTACACCTTTTCCACATTCACCACGAAGGACTTACACTCCGGCGGCTGCGTGGTCGCATCACCGACGAATGGCGTc < 8:700123/140‑1 (MQ=255)
tCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTc < 8:328643/140‑1 (MQ=255)
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CCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCT‑CCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTC > NZ_CP022686/2868614‑2868892
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
