Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F36 I0 R1
|
179 |
8076.5 |
8499890 |
98.3% |
8355391 |
135.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,868,753 |
T→G |
8.3% |
T18P (ACC→CCC) |
fdoH ← |
formate dehydrogenase O subunit beta |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,868,753 | 0 | T | G | 8.3%
| 371.6
/ 2.5
| 182 | T18P (ACC→CCC) | fdoH | formate dehydrogenase O subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (30/132); new base G (16/4); total (46/136) |
| Fisher's exact test for biased strand distribution p-value = 6.45e-08 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 191 total aligned reads displayed.
CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTC > NZ_CP022686/2868615‑2868892
|
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTc > 4:36771/1‑140 (MQ=255)
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGACTGGGGCCCGGGGGtg > 2:343959/1‑139 (MQ=255)
cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCCGCGGCGCGGGGGTc > 5:232329/1‑140 (MQ=255)
aattGTTTTGGCCTATGGTATCGGGATTTTCTTACCACTCTGAACACGCCTCCGGACAGGCTTTACAGCCGATAATGTTGTTAACGTCGAGGAGTTTCGCCCCTTCTTCCTGGAAGTCCCGCGCATGTGGCGCGGGGGTc < 4:1079793/137‑1 (MQ=19)
aaTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCa < 1:1097913/140‑1 (MQ=255)
aTTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGt < 2:196163/140‑1 (MQ=255)
gCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACCGGCTTTACCGCCGATACAGGTTGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCTCGCCGGTGGCGCGGGGGTGAGACCGtt > 8:827734/1‑138 (MQ=255)
gACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCCCCGGAAGCGCGGGGGGGAGACCCTTaatgg > 5:495830/1‑136 (MQ=21)
aCGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGGGCGGGGGTGAGGCCGGTATTcgc > 6:546578/1‑140 (MQ=21)
tATCGCGAATGTCGTTCCACTCTCAACACGCCACCAGACAGGCTTTACAGCCGATCCAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGaa < 5:905727/140‑1 (MQ=255)
tCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACTGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGaa < 7:139516/138‑1 (MQ=255)
tCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGaa < 8:269052/138‑1 (MQ=255)
gcgcgAATGTCGTTCCACTCTGAACACTCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAacg < 6:860266/139‑1 (MQ=255)
gcgAATGTCGTTCCACTCTGAACACGCCACCTTACAGGCTTTACAGCCGATCCAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAacgac < 5:57580/140‑1 (MQ=255)
gcgAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAacgac < 3:64288/140‑1 (MQ=255)
cgAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGAGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCACCCCCCTCAGGTGCGGGGGTCATCCCGATAGTCGCGGacccacc > 3:279616/1‑134 (MQ=18)
gAATGTCGTTCCACTCTGAACCCGCCACCTGACAGGCGTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAAcgacga < 3:405969/140‑1 (MQ=255)
gAATGTCGTGCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAAcgacga < 3:943623/140‑1 (MQ=255)
aaTGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCAGAGGCGCGGGGGTGAGCCCCTTAGTCGCGGCacgcagaa > 4:1022073/1‑135 (MQ=21)
gTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGa < 2:582931/140‑1 (MQ=255)
ctctGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCg < 5:262183/140‑1 (MQ=255)
tctGAACACGCCACCTGACAGGCTTTCCACCCGATACAGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGa < 1:162015/140‑1 (MQ=255)
aaCCCGCCACCTGACAGGCTTTACAGCCGATACCGGTGGTAACGTCGATGCGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGa < 1:217643/140‑1 (MQ=255)
aaCACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGCGGCGCGGGGGGGAGGCCGGTATTAGCGGCACGACGCAAGATATATTGTGAtttt > 5:454128/1‑138 (MQ=21)
aaCACGCCACCTGACAGGATTTACAGCCGATACCGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGa < 6:563194/140‑1 (MQ=255)
ccacGCCACCTGACAGGCTTTACAGCAGATACAGGTGGTAACGTCGATTAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 6:63278/139‑1 (MQ=255)
ccacGCCACCTGACAGGATTTATAGCCGATAAAGGTGTTAACGTCTATGATTTTCGCCACTTATTCCTTGAAGTCCCTCGCCTTAGGCGCTGGGGGCATACCGTTAGTCGCGGAACGAAGAATGATATCTTGCGATTGAt < 4:303806/139‑1 (MQ=255)
actcGCCAGCTGACATGCTTTACAGCGTATACAGGTGGTATCGTAGATGAGTTTGGCCACTTCTTCCTGGATGTCCAGCGACTCTGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGTTTGAt < 6:596242/137‑1 (MQ=255)
acacGCCCCCTGACAGGCTTTACAGCCGATACAGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 7:261635/138‑1 (MQ=255)
acacGCCACCTTCCCGGCTTTACAGCCTATACAGGTGGTAACGTCGATGAGTTTCGCCCCTTCTTCCTGGAAGTCCCGCGCCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 8:563227/138‑1 (MQ=255)
acacGCCACCTGCCAGGCTTTACCCCCGATACCGGTGGTAACGTCGATGCGGTTCGCCACTTCTTCCTGTAAGCCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 7:961843/138‑1 (MQ=255)
acacGCCACCTGACATGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCAACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 8:852705/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGTTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTg < 8:237500/138‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 3:716309/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 4:690596/140‑1 (MQ=255)
acacGCCACCTGACAGGCTTTACAGCCGATACAGGGGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGACGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 5:1034522/140‑1 (MQ=255)
acacGCCACCTGAAAGGCGTTACAGCCTATACTGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 6:924146/140‑1 (MQ=255)
acacGCACCCTGACAGTCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 6:470657/140‑1 (MQ=255)
acGCCACCTGTCAGGCTTTACAGCCGTTACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGTAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAt < 8:93009/138‑1 (MQ=255)
gCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTGAGACCGTTTTTCGCGGAACGACGAATGATATCTTGCGATTGATAAGc > 4:134900/1‑140 (MQ=255)
gCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGTGGGGGGGGGGGCAGGACGTGAGTCGCGGTACGACGCAAGCTATCATTCGAtttctaatg > 2:306216/1‑133 (MQ=18)
gCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCCCCGGAGGCGCGGGGGGCAGCCCGGTAGTGGCGGAACGCCGAATGATATCTGGCGGTTGATAAGc > 6:973094/1‑140 (MQ=25)
cccACCTGACAGGCTTGACAGCCGATACAGGTGGTAACGTCGAGGAGTTTCGCCACTTCTTCCTGGCAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATaa < 8:434660/137‑1 (MQ=255)
tGACTGGCTTTACAGCCGATACAGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATg < 6:29527/140‑1 (MQ=255)
cggCTTTACCGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGACGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 7:914587/137‑1 (MQ=255)
cggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 2:420099/139‑1 (MQ=255)
aGGCTTTACAGCCGTTACATGTGGGAACGTCGATGAGTATCGACACTTCTTCCTTTAAGTCCCTCGCCTGATGCGCGGGGGTCAGACCTTTATTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 6:764978/140‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 3:602400/140‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTGCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 1:578259/140‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGGAAGGCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATggcgt < 4:446925/140‑1 (MQ=255)
aGGCTTTACAGCCGATACAGGGGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtc < 7:548699/138‑1 (MQ=255)
ggCTTTACCGCCGATACAGGTGGTATCGTCGATGAGGTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgtc < 5:621896/140‑1 (MQ=255)
ggCTTTACAGCCGATACTGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgtc < 3:97335/140‑1 (MQ=255)
ggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgtc < 1:238172/140‑1 (MQ=255)
tcTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCGGCGCCTGAGTCGCGGGGGTCAGACCGTTAGTCGAGGAACGACGAATGATATCTTGCGATTGATAAGCCATATgtcgt < 8:615895/137‑1 (MQ=255)
tttACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGGGCGGGGGTCAGGCCGTTAGTCGCGGCACGACCAATTATATATTGGGCTTTATTAGGCATATTCGGTCTcc > 6:388258/1‑140 (MQ=25)
cgCCGATACTGGTGGTATCGTCGATGAGTTTCGCCACTTCTTCCTGGACGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGtt < 8:146326/137‑1 (MQ=255)
aGCCGATACAGGTGGTAACGTAGATGAGTTTCGCCACTTCTTCCTGGACGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGtt < 7:716751/138‑1 (MQ=255)
ccGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTacac < 6:146829/140‑1 (MQ=255)
ccGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTacac < 4:748554/140‑1 (MQ=255)
tACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGGGCGGGGGTGAGCACGTTTGGGGCGGATCGCCGAATGATTTAGTGGGATTGTTAAACCATATTTCGTGTCCGGTaacccc > 8:319250/1‑133 (MQ=255)
agttggtAACGCGGATTAGTTTCGCCACTTCTACCTGGAAGTCCCCCGCCTCAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTAGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTATcc < 5:190109/137‑1 (MQ=255)
tgtggtAACTGCGTTGAGTTTCGCAATTTCTTCCTGGTAGGCGGTCGCCTGTTGCGCGGGGGTTAGAGCGTTTGTCGCTGAACGACGTATGATATCTTGGGATTGATAAGCCATATGTCGTCTCCGTTACAGATTTTc < 8:197889/137‑1 (MQ=255)
ggtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGCGGCGCGGGGGTGCGACCGGTAGTAGGGGGACGCCGAATGATAAATTGGGCTTGATAAGCCCAATTTCGGCTACCGTACACCatttaccaat > 4:851334/1‑134 (MQ=255)
gtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGCGGCGCGGGGGGCAGGCCGGTTGTGGCGGGACGCCGAATGATTTCGTTCGATTGATATGCCAGATGTAGTGGCCGGTTAAACTTTTAcaca > 8:837949/1‑138 (MQ=255)
aaCGTAGATGAGTTTCGACACTTATTCATGGAAGTCCCGCGCAATCGGCGCGGGTGTCAGACCGTTATTCGCGGAACGACGAATGATATCTTGCGAATGATAAGCCATCTGTCGTCTCCGTTACACCTTTTCCACAtt < 8:607648/138‑1 (MQ=255)
cGTCGATGAGTTTCGCGACTTCTACCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGGCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTcaca < 3:818858/140‑1 (MQ=255)
taTGAGTTTCGCCACTTCTTACTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 1:478070/139‑1 (MQ=255)
gatgtttttCGCCACTTCTTCCTGTAAGTCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACTAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 6:707800/134‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGATGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaag < 7:119006/138‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 3:175141/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 2:252457/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaag < 7:640678/138‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGGCTCCGTTACACCTTTTCCACATTCACaagga < 6:108792/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGCCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATAGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 1:672038/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCGGGGGGGCGGGGGGCAGACCGGTAGTCGCGGCACCAAACAAGATATATTTCGATTTTTAAGCCATAAGTCGTCACACTTAAACCCTTTGAACAATAACaaaga > 2:478070/1‑140 (MQ=255)
gATGAGTTTCGCCACTTCTTCCTGGAAGGCCCGCGCATGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaagga < 1:350772/140‑1 (MQ=255)
gATGAGTTTCGCCACTTCTAGCTGGCAGTCCCGCGCCTGAGGGGGGGGGGTCAGAGCGTTAGTCGGGGAACGACGAATGTTTTCTTGCGTTTGATAAGCGATATGTCGTCTCGGTTACACCTTTTCCACATTCACaagga < 4:1009671/140‑1 (MQ=255)
tGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaaggaag < 5:351693/140‑1 (MQ=255)
cGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCGCGGGGGTGAGTCCGTTAGTAGCGGGACGCCGAATGATATCTTGGGATTTATAAGGCATATGTAGGATCCGTTAAACCGTTTACACATTCACAAAGCAAGACttta > 4:593027/1‑138 (MQ=255)
cACTTCTTCCTGGACGTCCCGCTCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACt < 3:310089/140‑1 (MQ=255)
ttcttcCTGGAAGTCCCGCGCCTGAGGCTCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCg < 3:550086/140‑1 (MQ=255)
ttcttcCTCTAAGGCCCGCGCCGGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc < 7:853428/138‑1 (MQ=255)
cTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCt < 1:383736/140‑1 (MQ=255)
ccGCGCCGGAGGCGGGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCAATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCg < 5:860833/140‑1 (MQ=255)
cgcCTGCGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGAGTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGc < 7:213754/138‑1 (MQ=255)
cgcCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCAt < 4:532031/140‑1 (MQ=255)
ccggAGGCGCGGGGGGCAGACCGGTAGTCGCGGATCGACGAATGATATCTTGCGATTTATAAGCCATATGGAGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 4:662687/137‑1 (MQ=255)
ccTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 5:755983/140‑1 (MQ=255)
ccTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 3:839486/140‑1 (MQ=255)
tGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 8:238872/138‑1 (MQ=255)
aGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATAACTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCGTTTACACATTAACAATGAAGGACATAAACAACGGCGTAATCGTGTTGACAACAccca > 6:74746/1‑138 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACCCCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAAt > 6:728139/1‑140 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTACGGCGTCTGCGTGTTCGCCTCACCGACGAAt > 5:744619/1‑140 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTACGGCGTCTGCGTGGTCGCATCACCGACGaaa > 1:1019296/1‑139 (MQ=255)
cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGAAAAGCCATATGTCGTCTCCGTTACACCTATTCCACATTAACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTAGCGTAACCGACGAAt > 1:885575/1‑140 (MQ=255)
ggggTCAGAAAGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGACGTCTCCGTTACACCTTTTCCACATTCACAATGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAAttg > 2:1090308/1‑138 (MQ=255)
gTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTTCACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGt < 3:1074136/140‑1 (MQ=255)
gTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGt < 3:1063501/140‑1 (MQ=255)
gTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGGCTCCGTTACACCTTTTCCCCATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGc < 7:978351/138‑1 (MQ=255)
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CAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGCGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCGACGAATGGCGTC > NZ_CP022686/2868615‑2868892
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
