Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A26 F2 I0 R1
|
64 |
5414.3 |
5027226 |
98.2% |
4936735 |
134.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| JC |
NZ_CP022686 |
2,590,563 |
+TTGG |
100% |
coding (109/153 nt) |
CIW80_RS26455 → |
hypothetical protein |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NZ_CP022686 |
= 2590563 | 2 (0.020) | 130 (1.220)
+TTGG |
70/236 |
NT |
98.5% |
coding (109/153 nt) |
CIW80_RS26455 |
hypothetical protein |
| ? | NZ_CP022686 |
2590564 = |
2 (0.020) | coding (110/153 nt) |
CIW80_RS26455 |
hypothetical protein |
Only 100 of 144 total aligned reads displayed.
ATTTTGGGAGAACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP022686/2590427‑2590563
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTTA > NZ_CP022686/2590564‑2590694
||||
TTTTGGGAGAACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGG < 5:372785/140‑1
GGAGAACAGGTCTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCGATCAGTCATTATCAGCCGCTTACTGTCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGg > 1:611078/1‑137
AACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCA < 2:445553/138‑1
AACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCA < 2:13321/138‑1
tGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAA < 4:558014/137‑1
AGGACTGTCCCCACTATGAAAACACAGCATGCTCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTGACTGGCTGGTGAATCTCTGGCGCTTAAAGTATTAGCTGATGAATTTGGTGTATCAGAA > 8:383433/1‑138
AGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAA < 8:72215/138‑1
AGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAA < 7:116070/138‑1
AGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTAAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAA < 8:69448/138‑1
AGGACTGTCCCCACTATGAAAACACAGCATGATAATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAA < 2:365704/138‑1
GACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCA < 6:34664/140‑1
GACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACG < 7:168548/138‑1
TCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACTCACCCTA > 6:135647/1‑140
TCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTAATGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTA > 5:82969/1‑140
TCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATAAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTA > 5:478394/1‑140
caCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTA > 1:217921/3‑138
CCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTTAATATCTGGAGCATAAAGTATTAGCTGATGAATTTGCTGTCTCAGAACGCACACTA > 3:199978/1‑138
CCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCga > 1:347826/1‑136
CCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTA > 1:467783/1‑138
CCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTA > 1:405705/1‑138
CCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTCGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTA > 7:192995/1‑138
CACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACA > 7:414000/1‑138
ACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGACCGCACCCTACAG < 3:471148/138‑1
ACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCG > 6:150824/1‑140
ACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAG < 3:173403/138‑1
TATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCG > 3:239808/1‑138
GAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATT > 6:593466/1‑140
GAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGATTAAAGTATTAGATGATGAATTTGGTGTCTCAGAACGCACCCTACATCGGGATT > 6:235387/1‑140
AAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACCGCGGGATT > 4:174996/1‑138
ACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGC < 5:66501/140‑1
ACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGC < 5:150824/140‑1
ACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCA < 4:550626/138‑1
ACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCA > 8:448270/1‑138
ACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCA < 2:213670/138‑1
GCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGTAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCATACAGCGGGATTTTCCGCA > 2:299294/1‑138
GCATGATCATCATGACCGACTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTATGGAGCTTAAAGTATAAGCTGATGAATTTGCTGTATCAGAACGCACCCAACAGCGGGATTTTAAGCA > 8:274783/1‑138
ATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCCCCCTCCAGCGGGATTTTCAGCAAC > 1:180013/1‑138
ATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAAC < 1:360386/138‑1
TCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCT < 7:448270/138‑1
TCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCAGA > 6:184247/1‑140
TCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCC > 6:31164/1‑140
ATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTCGCTGATGAATTTGTTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCC > 2:278976/1‑138
ATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCC < 1:287856/138‑1
TGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCA > 3:424019/1‑138
GACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCT > 6:98717/1‑140
TGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCCCCCAACAGCCGGATTTTCAGCAACGCCTGAACCCTCTGGATC > 1:386943/1‑138
TGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATC > 3:178698/1‑138
TCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGC < 2:88121/138‑1
TCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGC > 1:398228/1‑138
TCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGC < 4:480580/138‑1
CAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCA < 2:421906/138‑1
aTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATGTCTGGAGCTTAAAGTATTAGCTGAAGAATATGGTGTCTCAGAACGCAACCAACAGCGGGATTTTCAGCAACGCCTGATACATATGGATCTTGAGCATCGC > 2:70076/2‑138
CTATCAGTCATTATCAGCCGCTTACTGGCTTGTGAATCTCTGGAGCTTAAAGTATTAGATGATGAATTTTGTGTATCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATATGGATCTTGAGCATCGC > 7:391490/1‑138
TCATTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGC < 2:620570/138‑1
AGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGG > 7:321821/1‑138
GTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTCTTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGA < 2:10459/138‑1
atCCGCTTACTGGCTGGTGAATCTCTGTAGCTTAAAGTATTAGCTGATGAATTTGGTGACTCAGAACGCAACCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGATGTTACCGA > 2:27208/3‑138
CCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGG < 6:346696/107‑1
CCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGG > 5:346696/1‑107
GCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTA > 4:460271/1‑138
GCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTA > 4:445424/1‑138
GCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGC < 3:149651/87‑1
ACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGCTTTTCAGCAACGCCAGAACCATCGGGATCTTGAGCATCGCAGCGGAAGTAACCGCCTTATCCG > 3:360885/1‑138
ACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCc > 4:570242/1‑137
ACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCAGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCG > 2:185169/1‑138
TGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGAAGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCC > 1:629954/1‑138
GGCTGGGGAATATCTGGTGCTTAAAGTATTATCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGAGTTTCAGCACCGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAA < 5:568648/140‑1
TGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGTGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAG < 6:185016/140‑1
TGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGATCATCGCAGCGGAAGTTACCGACTTATCCGCCAAcc > 8:279920/1‑136
TGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAAC < 1:203/138‑1
AATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCC < 8:465836/138‑1
atcgcaGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGGCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCG < 1:313833/132‑1
ATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCG < 3:93769/138‑1
ATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCG < 7:592599/138‑1
ATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCG < 8:351476/138‑1
ATCTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCG < 4:297162/138‑1
CTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAG > 6:496836/1‑140
CTCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGCGATTTTCAGCAACGCCTGATACATCTCGATCTTGAGCATCGCCGCGCAAGATACCGACTTATCCGCCAAACAGGCCGGGAG > 6:496837/1‑140
TGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGTGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCTCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGC < 2:298221/138‑1
TGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCAC < 6:569355/140‑1
TGGAGCTTAAAGTATTAGCTGATGAATTTGGTGGCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCAC < 5:169658/140‑1
CTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTCCAGCGGGAGTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTA < 2:166260/138‑1
CTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACC > 5:171412/1‑140
AAAGTATTAGCTTATGAATTTTGTGTCTCATAACGCACCCTACAGCGGGTTTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTTCCC < 4:616965/138‑1
AAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCA > 2:624787/1‑138
AAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGG > 2:499061/1‑126
AAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGG < 1:499061/126‑1
AGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAA > 3:157783/1‑138
TTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACA > 3:427617/1‑138
TTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCAC < 5:344602/126‑1
AGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATT < 2:467783/138‑1
GCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATACTGCAGGATCTTGAGCATCGCAGCGGAAGATACCGAAATATCCGCCAAACAGGCCGGGAGCACTTACCCAAAACATgt > 3:355686/1‑136
CTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCATGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTG > 3:63121/1‑138
TGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTTA > 6:413906/1‑140
AATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTTA > 7:320918/1‑138
AATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTTA > 3:104090/1‑138
AATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTTA > 4:406296/1‑138
AATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCA > 8:212680/1‑40
AATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCA < 7:212680/40‑1
AATTTGGTGTCTCAGAACGCAACATACAGCGGGATTTTCAGCAACGCCTGATCCATCTGTATATTGAGCATCGCAGCTGAAGTTACCGACTTATCCTCCAAACAGGCCTGGAGCACTTACCAAATACATTTGCGTTTA > 4:495629/1‑138
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ATTTTGGGAGAACAGGACTGTCCCCACTATGAAAACACAGCATGATCATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATCTCTGGAGCTTAAAGTATTAGCTGATGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP022686/2590427‑2590563
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCCATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCGTTTA > NZ_CP022686/2590564‑2590694
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
