Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 343 268.7 10873516 97.0% 10547310 150.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
JC CP009974 3,898,294 (TGGCCGTCGGGTTGCCGAGGACGGTGCAGACCGACTCAA)1→2 coding (197/246 nt) RPPX_17380 → hypothetical protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 3898232 =57 (0.210)199 (0.870) 124/252 0.9 83.0% coding (135/246 nt) RPPX_17380 hypothetical protein
?CP009974 = 3898270 34 (0.150)coding (173/246 nt) RPPX_17380 hypothetical protein

Only 100 of 284 total aligned reads displayed.

ATGGATCATTTGATCTGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009974/3898405‑3898232
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgagtcggtctgcaccgtcctcgGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAACAGTTAAGGCGACTCCAATC  <  CP009974/3898270‑3898121
                                                                                                                                                                                                                                                                                                                                    
ATGGATCATTTGATCTGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCAT                                                                                                                                                                               >  2:2078411/1‑151
   GATCATTTGATCTGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGCGTCGGTCTGCACCGTCCTCGTCAACCCGACGGCCATcca                                                                                                                                                                            >  2:4232792/1‑148
      CATTTGATCTGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGCGTC                                                                                                                                                                         >  1:2309371/1‑151
      CATTTGATCTGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTC                                                                                                                                                                         >  1:3907651/1‑151
       ATTTGATCTGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCG                                                                                                                                                                        >  2:496117/1‑151
          TGATCTGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTC                                                                                                                                                                     >  1:3036276/1‑151
          TGATCTGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTC                                                                                                                                                                     >  2:443035/1‑151
           GATCTGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCT                                                                                                                                                                    >  1:821484/1‑151
           GATCTGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCT                                                                                                                                                                    <  2:3087171/151‑1
            ATCTGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTG                                                                                                                                                                   <  2:4313240/151‑1
               TGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCAC                                                                                                                                                                <  1:3445719/151‑1
                GCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACC                                                                                                                                                               <  2:1512645/151‑1
                       AGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCCGTGAGTCGGGCTGCACCGTCCTCG                                                                                                                                                        >  1:3209899/1‑151
                       AGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCG                                                                                                                                                        <  1:2788781/151‑1
                       AGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCG                                                                                                                                                        <  1:78301/151‑1
                        GCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGG                                                                                                                                                       <  2:1617344/151‑1
                        GCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGG                                                                                                                                                       <  1:4662869/151‑1
                         CCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGC                                                                                                                                                      <  1:3747010/151‑1
                         CCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGC                                                                                                                                                      <  2:1211344/151‑1
                         CCCGGTGTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCGAGCATTGCTGGCTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGC                                                                                                                                                      <  2:4683685/151‑1
                            GGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAAC                                                                                                                                                   <  1:1000093/151‑1
                             GTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACC                                                                                                                                                  <  1:100680/151‑1
                                ttgCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGA                                                                                                                                               <  2:3521120/148‑1
                                   CCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGCCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCTTCGGCAACCCGACGG                                                                                                                                            >  1:2234028/1‑151
                                     GGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCC                                                                                                                                          <  2:320868/151‑1
                                     GGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCC                                                                                                                                          >  2:2461868/1‑151
                                       GCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCAT                                                                                                                                        <  2:1744761/151‑1
                                          TTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCCACGGCCctcga                                                                                                                                     >  2:3566232/1‑146
                                           TTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAG                                                                                                                                    >  1:4627200/1‑151
                                            TGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGT                                                                                                                                   >  1:5166649/1‑151
                                            TGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGT                                                                                                                                   >  1:1133559/1‑151
                                            TGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGT                                                                                                                                   <  2:4757691/151‑1
                                                GCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGT                                                                                                                               <  2:692070/151‑1
                                                  AGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCT                                                                                                                             >  1:530628/1‑151
                                                    CCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGC                                                                                                                           >  1:4286453/1‑151
                                                     CCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGCCGGCCATCGAGTCGGTCTGCACCGTCCTCGGCACCCCGACGCCCACTGAGTCGGTCTGCc                                                                                                                          >  2:4322020/1‑150
                                                       AGGCACATCAAGCATTGTTGCCTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCCGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACC                                                                                                                        <  2:4633990/151‑1
                                                          CACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCCACCCGACGGCCATTGAGTCGGTCTGCACCGTC                                                                                                                     >  2:1787021/1‑151
                                                          CACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTC                                                                                                                     >  1:2819914/1‑151
                                                             ATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTC                                                                                                                  <  1:3822150/151‑1
                                                              TCAAGCATTGATCACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCG                                                                                                                 <  1:3276199/151‑1
                                                               CAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGA                                                                                                                >  2:2218670/1‑151
                                                                  gcgTTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCA                                                                                                             <  1:4489703/148‑1
                                                                       GATGCCTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGATTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATT                                                                                                        <  2:898904/151‑1
                                                                       GATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCGCGGCAACCCGACGGCCATTGAGGCGGTCTGCACCGTCCTCGACCAGGCTT                                                                                                        >  1:4892281/1‑151
                                                                        ATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCCCCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGCCCAGGACTG                                                                                                       >  2:4533207/1‑151
                                                                          GACACGGTCCGAACCGTCCTCGGCGACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGT                                                                                                     <  2:123370/151‑1
                                                                           gCTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGGGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTG                                                                                                    <  2:2382911/150‑1
                                                                                 TCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACA                                                                                              <  1:3543028/151‑1
                                                                                       CCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGACCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATT                                                                                        <  1:3678245/151‑1
                                                                                        CGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTT                                                                                       <  1:1408463/151‑1
                                                                                         GTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGGAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGCTTGGTGCACACAGGTATTTG                                                                                      >  2:5200383/1‑151
                                                                                          TCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGC                                                                                     <  1:2577917/151‑1
                                                                                            CTCGGCTGCACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAA                                                                                   <  2:3607272/151‑1
                                                                                            CTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAA                                                                                   <  1:120296/151‑1
                                                                                            CTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAA                                                                                   >  1:1468366/1‑151
                                                                                             TCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAG                                                                                  <  1:2711326/151‑1
                                                                                                   acccgaCGGTCGTTGCGTCGGTCTGCACCGTCCTCGGCAGCCCGAGGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTAT                                                                            <  2:195194/145‑1
                                                                                                      CGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGG                                                                         >  2:2156207/1‑151
                                                                                                       GCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGT                                                                        <  1:2441619/151‑1
                                                                                                         CGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCC                                                                      >  1:2952724/1‑151
                                                                                                          GGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCA                                                                     <  1:254111/151‑1
                                                                                                          GGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCA                                                                     <  1:5014787/151‑1
                                                                                                             CGTTGAGGCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTT                                                                  <  1:1739978/151‑1
                                                                                                              GTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTG                                                                 >  2:518650/1‑151
                                                                                                               TTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGC                                                                <  1:565983/151‑1
                                                                                                                   GTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTG                                                            >  1:984311/1‑151
                                                                                                                    TCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGC                                                           <  2:3303557/151‑1
                                                                                                                     CGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCT                                                          <  2:1804186/151‑1
                                                                                                                      GGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTC                                                         <  1:680605/151‑1
                                                                                                                            CACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGC                                                   <  1:1891175/151‑1
                                                                                                                              CCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTG                                                 <  2:3732327/151‑1
                                                                                                                               CGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGG                                                <  1:3615171/151‑1
                                                                                                                               CGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGG                                                <  1:1358076/151‑1
                                                                                                                                GTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGA                                               >  1:4063857/1‑151
                                                                                                                                 TCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAA                                              <  1:1505906/151‑1
                                                                                                                                      GGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGTATGCGtc                                         >  2:4052390/1‑149
                                                                                                                                      GGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCC                                         >  2:4779674/1‑151
                                                                                                                                        CAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCAT                                       <  2:1370910/151‑1
                                                                                                                                         AACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATC                                      <  1:4807544/151‑1
                                                                                                                                          ACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGGAGCGCCATCG                                     >  2:1010040/1‑151
                                                                                                                                           CCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGA                                    <  1:3508117/151‑1
                                                                                                                                            CCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAA                                   <  2:1078415/151‑1
                                                                                                                                             CGACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAAC                                  >  2:5350095/1‑151
                                                                                                                                               ACGGCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGATGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTT                                <  2:4170522/151‑1
                                                                                                                                                  GCCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCG                             <  1:605657/151‑1
                                                                                                                                                   CCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGC                            >  2:3036812/1‑151
                                                                                                                                                   CCATTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGC                            >  2:5045274/1‑151
                                                                                                                                                       TGACTCGGGCTGCACCGTCCTCGGCAACCCGGCGGCCATTGAGTCGGTCTGCACCGGCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCCTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAG                        <  2:4827867/151‑1
                                                                                                                                                          GTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAAC                     <  2:2806713/151‑1
                                                                                                                                                            CGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAACAG                   >  1:2008028/1‑151
                                                                                                                                                             GGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAACAGT                  >  1:5202228/1‑151
                                                                                                                                                                   CACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAACAGTTAAGGC            <  2:113894/151‑1
                                                                                                                                                                         CCTCGGCAACCCGACGGCCATTTAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAACAGTTAAGGCGACTCC      <  1:4447730/151‑1
                                                                                                                                                                         CCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAACAGTTAAGGCGACTCC      <  1:4346127/151‑1
                                                                                                                                                                         CCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGGCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAACAGTTAAGGCGACTCC      <  2:610373/151‑1
                                                                                                                                                                          CTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAACAGTTAAGGCGACTCCA     >  2:713676/1‑151
                                                                                                                                                                           TCGGCAGCCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGAGCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAACAGTTAAGGCGACTCCAA    <  2:4880224/151‑1
                                                                                                                                                                             GGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAACAGTTAAGGCGACTCCAATC  >  1:1664063/1‑151
                                                                                                                                                                             GGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAACAGTTAAGGCGACTCCAATC  >  2:300099/1‑151
                                                                                                                                                                                                                                                                                                                                    
ATGGATCATTTGATCTGCCAAAAAGCCCGGTTTTTCCGGGCTTTTGGCGCAGCCCAGGCACATCAAGCATTGATGACTCGGTCCGAACCGTCCTCGGCTACACGCCGGTCGTTGAGTCGGTCTGCACCGTCCTCGGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009974/3898405‑3898232
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgagtcggtctgcaccgtcctcgGCAACCCGACGGCCATTGAGTCGGTCTGCACCGTCCTCGACCAGGATTGGTGCACACAGGTATTTGCAAGGCTTATGGGTCCAGTTGCCTTGCTCCTTGGCTGGAAGCGCCATCGAACTTGCGCTCAGAACAGTTAAGGCGACTCCAATC  <  CP009974/3898270‑3898121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A