Hadiastri_2021: Solvent_Tolerance_Pputida
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Metadata |
Mutations |
Converged Mutations |
Fixed Mutations |
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Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate | Predicted Mutations | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
|---|---|---|---|---|---|---|
| A0 F0 I1 R1 | 336 | 367.5 | 14491858 | 96.8% | 14028118 | 150.7 |
Breseq alignment
| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 4,147,169 | (CTTCTTG)5→6 | intergenic (+421/‑600) | RPPX_18425 → / → RPPX_18430 | enoyl‑CoA hydratase/conjugal transfer protein TraR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 4,147,133 | 1 | . | G | 91.0% | 174.9 / 35.8 | 111 | intergenic (+385/‑636) | RPPX_18425/RPPX_18430 | enoyl‑CoA hydratase/conjugal transfer protein TraR |
| Reads supporting (aligned to +/- strand): ref base . (4/6); new base G (50/51); total (54/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
| * | CP009974 | 4,147,133 | 2 | . | C | 91.0% | 175.1 / 35.1 | 111 | intergenic (+385/‑636) | RPPX_18425/RPPX_18430 | enoyl‑CoA hydratase/conjugal transfer protein TraR |
| Reads supporting (aligned to +/- strand): ref base . (4/6); new base C (50/51); total (54/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
| * | CP009974 | 4,147,133 | 3 | . | T | 91.0% | 175.2 / 34.8 | 111 | intergenic (+385/‑636) | RPPX_18425/RPPX_18430 | enoyl‑CoA hydratase/conjugal transfer protein TraR |
| Reads supporting (aligned to +/- strand): ref base . (4/6); new base T (50/51); total (54/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
| * | CP009974 | 4,147,133 | 4 | . | T | 91.0% | 175.9 / 34.8 | 111 | intergenic (+385/‑636) | RPPX_18425/RPPX_18430 | enoyl‑CoA hydratase/conjugal transfer protein TraR |
| Reads supporting (aligned to +/- strand): ref base . (4/6); new base T (50/51); total (54/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | CP009974 | 4,147,133 | 5 | . | C | 91.0% | 174.7 / 35.1 | 111 | intergenic (+385/‑636) | RPPX_18425/RPPX_18430 | enoyl‑CoA hydratase/conjugal transfer protein TraR |
| Reads supporting (aligned to +/- strand): ref base . (4/6); new base C (50/51); total (54/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
| * | CP009974 | 4,147,133 | 6 | . | T | 91.0% | 175.4 / 34.8 | 111 | intergenic (+385/‑636) | RPPX_18425/RPPX_18430 | enoyl‑CoA hydratase/conjugal transfer protein TraR |
| Reads supporting (aligned to +/- strand): ref base . (4/6); new base T (50/51); total (54/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
| * | CP009974 | 4,147,133 | 7 | . | T | 91.0% | 175.4 / 34.8 | 111 | intergenic (+385/‑636) | RPPX_18425/RPPX_18430 | enoyl‑CoA hydratase/conjugal transfer protein TraR |
| Reads supporting (aligned to +/- strand): ref base . (4/6); new base T (50/51); total (54/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 163 total aligned reads displayed.
AGCGGAGCGTAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTC > CP009974/4146983‑4147246 ||||||| ggcgcagcgcaGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGCCTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTc < 2:5076110/150‑1 (MQ=255)agcgcagcgcAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTc < 2:5319595/151‑1 (MQ=25) cgcagcgCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gc < 1:6077592/148‑1 (MQ=25) gcagcgCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gct > 2:5708947/3‑151 (MQ=18) gcagcgCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gct < 1:3820607/149‑1 (MQ=25) agcgCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttc < 1:2779504/151‑1 (MQ=25) ggCCGGATGATGGGAGGGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttct < 2:3994186/151‑1 (MQ=38) ggCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttct < 1:1351523/151‑1 (MQ=38) ccGGATGATGGGGGCGCAGCGTTTTTTGGTTACTTTTTGTAGCGTTAGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttg < 2:871006/151‑1 (MQ=255) cGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgc > 1:669843/1‑151 (MQ=38) gatgatGGGAGCTCAGCGTTTTTGGGTTACTTTGTGTCGTGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgctt < 2:4063586/151‑1 (MQ=255) atgatgGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttc < 1:1165546/151‑1 (MQ=38) atgatgGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttc < 1:4276665/151‑1 (MQ=35) atgaggGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAACCAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttc < 2:2339253/151‑1 (MQ=255) gatgGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGCGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttctt < 2:6920069/151‑1 (MQ=38) ggAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgctt < 2:2171821/151‑1 (MQ=38) gAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttc < 2:1066988/151‑1 (MQ=38) cgcAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg < 2:6970506/151‑1 (MQ=38) cgcAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg < 1:5610710/151‑1 (MQ=38) gcAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttg > 2:6473763/1‑136 (MQ=40) gcAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttg < 1:2809858/136‑1 (MQ=40) cAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑ct > 1:3133478/1‑151 (MQ=38) aGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑ctt < 2:7116334/151‑1 (MQ=38) aGCGTTTTTTGGTTACTTGTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑ctt < 2:3667154/151‑1 (MQ=38) cGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cttct < 1:6452096/151‑1 (MQ=35) cGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cttct < 1:1515210/151‑1 (MQ=38) cGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cttct < 1:4763562/151‑1 (MQ=38) gTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cttctt < 2:3154427/151‑1 (MQ=38) gTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cttctt < 2:2562177/151‑1 (MQ=37) gTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cttctt < 2:5625137/151‑1 (MQ=38) gTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cttctt < 2:5819069/151‑1 (MQ=38) gTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cttctt < 2:6054525/151‑1 (MQ=38) ttttttGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑Gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cttcttg < 2:6273702/151‑1 (MQ=38) ttttttGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑Gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cttcttg < 1:6741910/151‑1 (MQ=38) ttGGTTACGTTTTGTCGTGTTTGACAAAAAGTGACACGCAGAAAGGGAGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTAACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑Gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cttcttgcttc < 1:1053252/151‑5 (MQ=11) tGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCAGAAGGGGCGCTAAGGTGATTCAGCCTCCCCATCGCGCACCGACTGTTCACCGCGCCCATCCTGACGAGTTG‑‑‑‑‑‑‑gctgcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cctctctcctct > 2:5163645/1‑144 (MQ=2) gTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑Gcttcttg‑‑‑‑‑‑‑cttcttgcttcttgcttct‑‑‑‑‑‑‑tg‑‑‑‑‑‑‑cttcttgcttcttg > 1:4807653/1‑144 (MQ=255) aaaaGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTa > 1:831105/1‑151 (MQ=14) aaGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAgg > 2:2211975/1‑151 (MQ=14) gTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTa < 2:1355378/151‑1 (MQ=14) tGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTat > 2:4924218/1‑151 (MQ=14) gACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTatt > 1:6699196/1‑151 (MQ=14) gACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTatt > 2:6749015/1‑151 (MQ=14) aCTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTattc < 1:3622368/151‑1 (MQ=11) aCTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTattc < 2:2713020/151‑1 (MQ=14) tCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTattcat > 2:6640206/1‑151 (MQ=14) tCGCCGTAAGGGCGAAAAGCTGAGTCAGCGTCGCCATCGCAAGTGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTattcat < 2:7193261/151‑1 (MQ=11) cGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTattcatt < 1:5369700/151‑1 (MQ=11) gCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCGTTCACATCGAGTAGGTattccttc > 2:3721310/1‑151 (MQ=11) ccGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCTCAAATGTACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTCTTGCTTCTTCCTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATTTAGCAGGTattcctttc > 2:3359369/1‑149 (MQ=11) cGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTattcattctc > 1:189867/1‑149 (MQ=11) cGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTattcattcgc > 1:2373513/1‑149 (MQ=11) cGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTattcattcgc > 2:2869947/1‑149 (MQ=11) tAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCgcgc < 2:3162385/151‑1 (MQ=11) aaGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCa < 1:4093630/151‑1 (MQ=11) aGGGCGAAAAGGGGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCag < 1:910711/151‑2 (MQ=11) ggCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGt > 2:1362122/1‑151 (MQ=11) ggCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGt < 2:1937474/151‑1 (MQ=11) ggCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGt < 1:6714052/151‑1 (MQ=11) cGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTgg < 2:1611035/151‑1 (MQ=11) gAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGgc > 2:2456479/1‑151 (MQ=11) gAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGgc < 1:579043/151‑1 (MQ=11) gAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGgc < 2:5151044/151‑1 (MQ=11) aaaaGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGgcg < 1:2278108/151‑1 (MQ=11) aaaGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGgcgc > 1:5857169/1‑151 (MQ=11) aaGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCa < 2:3019376/151‑1 (MQ=11) aGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCAt > 2:6098041/1‑151 (MQ=11) ggTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATa < 2:5256904/151‑1 (MQ=11) tGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGt < 2:1538804/151‑1 (MQ=11) cAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTTACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCt > 2:4780773/1‑151 (MQ=11) aGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGCGGCGCATAGTCACCtt > 2:4822496/1‑151 (MQ=11) gCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCttt < 2:2678919/151‑1 (MQ=11) gCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCttt < 1:2587751/151‑1 (MQ=11) cGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACTGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTc > 1:4584734/1‑151 (MQ=11) cGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTc > 1:433390/1‑151 (MQ=11) cGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTc > 2:3660685/1‑151 (MQ=11) gTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCTCAGGCGGCGCATAGTCATCTTTcc > 2:4254189/1‑151 (MQ=11) gTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTcc > 2:4031350/1‑151 (MQ=11) gTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTcc < 1:3677014/151‑1 (MQ=11) tCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCg < 2:669843/151‑1 (MQ=11) cGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGc < 2:1486782/151‑1 (MQ=11) gCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGcc < 1:550565/151‑1 (MQ=11) ccATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGccc > 1:6974384/1‑151 (MQ=11) cATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCt > 2:1686898/1‑151 (MQ=11) aTCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCtt < 1:3819241/151‑1 (MQ=11) aTCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCtt < 2:3830703/151‑1 (MQ=11) aTCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCtt < 2:3282704/151‑1 (MQ=11) aTCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCtt < 2:3133478/151‑1 (MQ=11) tCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTa > 1:3049261/1‑151 (MQ=11) cGCAAATGGACTGTTCACTGAGCCAAAACAGGCGAGTCC‑‑‑‑‑‑‑GCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCTTGCTTCCTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTAc < 2:5667140/151‑1 (MQ=11) cGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTAc < 2:772871/151‑1 (MQ=11) gCAAATGGACTGTTCACTGAGCCAAAACAGACTAGTTC‑‑‑‑‑‑‑GCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TGCTTCTTTCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCTCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTAct > 1:3320568/1‑150 (MQ=11) gCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTAcg > 1:3758972/1‑151 (MQ=11) gCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTAcg > 2:248637/1‑151 (MQ=11) aaaTGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTAcggc < 1:5633434/151‑1 (MQ=11) aaTGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTCTTGCTTCTTTCTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTTTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTTACTTTTCCTCCCTTAcgtcg > 2:1786107/1‑151 (MQ=11) aTGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTActgccg > 1:1874780/1‑149 (MQ=11) aTGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTAcggcgg > 1:1455671/1‑151 (MQ=11) ggACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGt < 2:6445038/151‑1 (MQ=11) ggACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGt < 1:5357451/151‑1 (MQ=11) ||||||| AGCGGAGCGTAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTCTTG‑‑‑‑‑‑‑CTTCTTGCTTCTTGCTTCT‑‑‑‑‑‑‑TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTC > CP009974/4146983‑4147246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
TTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGC > CP009974/4147019‑4147312 | TTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTG < SRR10918235.6773541/151‑1 (MQ=32)TTCTTTGGTTACTTTTTGTCGCGTTTTACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCGGCGTCGCCATCGCGATTGGACTGTTCTCTTAGTCAAAACAGACGA‑AT‑‑‑‑‑‑TT‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTG < SRR10918235.3025265/151‑1 (MQ=0) TTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGctt < SRR10918235.1939051/151‑4 (MQ=33) TTGGTTACGTTTTGTCGTGTTTGACAAAAAGTGACACGCAGAAAGGGAGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTAACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGcttc < SRR10918235.1057291/151‑5 (MQ=27) GTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGcttcttg > SRR10918235.4828918/1‑144 (MQ=33) ACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGcttcttggat < SRR10918235.2806442/151‑11 (MQ=33) ACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGcttcttggat < SRR10918235.5560240/151‑11 (MQ=33) gtgtgctcttccgatctAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGcttcttggatgt < SRR10918235.6291497/134‑13 (MQ=35) gtgtgctcttccgatctAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGcttcttggatgt < SRR10918235.6291619/134‑13 (MQ=35) TTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGcttcttggatgtg < SRR10918235.6115257/151‑14 (MQ=33) CGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATT < SRR10918235.1508634/151‑1 (MQ=29) CGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATT < SRR10918235.1508753/151‑1 (MQ=29) CGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATT > SRR10918235.1545630/1‑151 (MQ=29) GCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGcttcttggatgtgggcattt > SRR10918235.3104527/1‑131 (MQ=34) CGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCA < SRR10918235.2884566/151‑1 (MQ=29) GTTTGACAAAAAGTGACTCACCGTAAGTGCGAACAGGTGAGCCAGCGTCGCCATCGCACATGGACGGTTCACTGAGCCAAAACAGACGACGTCGCTTCTC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCGTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTTGGCTTTCAC > SRR10918235.1329199/1‑151 (MQ=22) TGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATC < SRR10918235.4605714/151‑1 (MQ=29) ACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGA < SRR10918235.539879/151‑1 (MQ=29) CAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAG > SRR10918235.515377/1‑151 (MQ=29) AAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGT > SRR10918235.2616452/1‑151 (MQ=29) AAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGT > SRR10918235.6899526/1‑151 (MQ=29) AAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGT > SRR10918235.1582739/1‑151 (MQ=29) AAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTA > SRR10918235.834099/1‑151 (MQ=29) GACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATT > SRR10918235.6730597/1‑151 (MQ=29) ACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTC < SRR10918235.3638521/151‑1 (MQ=29) TCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCAT > SRR10918235.672921/1‑151 (MQ=29) CGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATT < SRR10918235.5394094/151‑1 (MQ=29) CGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATT > SRR10918235.1181960/1‑151 (MQ=29) GCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTC < SRR10918235.3649118/151‑1 (MQ=29) CGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCTC > SRR10918235.190525/1‑151 (MQ=29) CGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGC > SRR10918235.2384014/1‑151 (MQ=25) CGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGC > SRR10918235.7035496/1‑151 (MQ=25) AAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCA < SRR10918235.4111804/151‑1 (MQ=19) AAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCA > SRR10918235.2974119/1‑151 (MQ=19) AGGGCGAAAAGGGGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAG < SRR10918235.914070/151‑1 (MQ=16) GGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGT > SRR10918235.3128016/1‑151 (MQ=10) GGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGT < SRR10918235.6745523/151‑1 (MQ=10) GGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGT < SRR10918235.5869804/151‑1 (MQ=10) GCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTG < SRR10918235.5078218/151‑1 (MQ=8) GAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGC < SRR10918235.581162/151‑1 (MQ=6) AAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCG < SRR10918235.2288543/151‑1 (MQ=6) AAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCG < SRR10918235.2288255/151‑1 (MQ=6) AAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGC > SRR10918235.5884164/1‑151 (MQ=6) AAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCA < SRR10918235.3963399/151‑1 (MQ=6) AGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCAT < SRR10918235.6925689/151‑1 (MQ=6) GCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTT < SRR10918235.2598927/151‑1 (MQ=6) CGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACTGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTC > SRR10918235.4604909/1‑151 (MQ=6) CGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTC < SRR10918235.5735250/151‑1 (MQ=6) CGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTC > SRR10918235.434901/1‑151 (MQ=6) CGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTC < SRR10918235.538125/151‑1 (MQ=6) GTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCC < SRR10918235.3693404/151‑1 (MQ=6) GCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCC < SRR10918235.552565/151‑1 (MQ=6) CCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCC > SRR10918235.7007346/1‑151 (MQ=6) CCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCC > SRR10918235.4239619/1‑151 (MQ=6) ATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTT < SRR10918235.3836188/151‑1 (MQ=6) TCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTA > SRR10918235.3062449/1‑151 (MQ=6) TCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTA > SRR10918235.4687593/1‑151 (MQ=6) GCAAATGGACTGTTCACTGAGCCAAAACAGACTA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTTCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCTCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACT > SRR10918235.3335225/1‑151 (MQ=6) GCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACG > SRR10918235.3775701/1‑151 (MQ=6) GCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACG > SRR10918235.3777146/1‑151 (MQ=6) AAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGC < SRR10918235.5659320/151‑1 (MQ=6) ATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACtgccg > SRR10918235.1883439/1‑146 (MQ=6) ATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGG > SRR10918235.1462531/1‑151 (MQ=6) ATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGG < SRR10918235.3467741/151‑1 (MQ=6) ATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGG > SRR10918235.1461993/1‑151 (MQ=6) GGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGT < SRR10918235.5381768/151‑1 (MQ=6) GACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTC > SRR10918235.4403938/1‑151 (MQ=6) CTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCAC < SRR10918235.5055358/151‑1 (MQ=6) TGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACT > SRR10918235.6253318/1‑151 (MQ=6) TCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTT < SRR10918235.2986641/151‑1 (MQ=1) TCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTT < SRR10918235.2987381/151‑1 (MQ=1) CACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTT < SRR10918235.6780682/151‑1 (MQ=0) CACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTT > SRR10918235.527957/1‑151 (MQ=0) ACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTG > SRR10918235.5624743/1‑151 (MQ=0) CTGAGTCAAAACAGACGA‑AT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTG < SRR10918235.1923540/51‑1 (MQ=0) GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAA > SRR10918235.6097170/1‑151 (MQ=0) GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATCCACATTGAGTAGGTATTCATTCGCGCAGGTGGCG < SRR10918235.1033238/82‑1 (MQ=0) GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATCCACATTGAGTAGGTATTCATTCGCGCAGGTGGC < SRR10918235.1185843/81‑1 (MQ=2) GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATCCACATTGAGTAGGTATTCATTCGCGCAG < SRR10918235.5509413/76‑1 (MQ=15) GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATCCACATTGAGTAGGTATTCATTCGCGCAG > SRR10918235.5703972/1‑76 (MQ=15) GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATCCACATTGAGTAGGTATTCATTCGCGCA > SRR10918235.2336415/1‑75 (MQ=20) GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATCCACATTGAGTAGGTATTCATTCGCGCA < SRR10918235.4167696/75‑1 (MQ=20) GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATCCACATTGAGTAGGTATTCATTCGCGC > SRR10918235.5693702/1‑74 (MQ=23) GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATCCACATTGAGTAGGTATTCATTCGCGC < SRR10918235.2531108/74‑1 (MQ=23) GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTG > SRR10918235.1629013/1‑36 (MQ=0) GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTG > SRR10918235.3853888/1‑36 (MQ=0) GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTG < SRR10918235.5104606/36‑1 (MQ=0) GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTG < SRR10918235.6374354/36‑1 (MQ=0) TTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTG < SRR10918235.326004/31‑1 (MQ=0) TTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTG < SRR10918235.4019759/31‑1 (MQ=0) TTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTG < SRR10918235.3116857/31‑1 (MQ=0) CTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTAT > SRR10918235.1860248/1‑151 (MQ=0) TTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATC > SRR10918235.76723/1‑151 (MQ=0) TCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCG > SRR10918235.3469583/1‑151 (MQ=0) TCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTG > SRR10918235.2775888/1‑151 (MQ=0) TG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGC > SRR10918235.6525050/1‑151 (MQ=0) ttccgttcTCTTGTATGTGGGCTTTCACATCTAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAGCGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCT < SRR10918235.5069585/143‑1 (MQ=0) | TTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGA‑GT‑‑‑‑‑‑TC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTG‑‑‑‑‑‑‑CTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGC > CP009974/4147019‑4147312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |