Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A2 F1 I1 R1	404	265.1	10478538	96.8%	10143224	150.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	4,147,169	(CTTCTTG)_5→6	intergenic (+421/‑600)	RPPX_18425 → / → RPPX_18430	enoyl‑CoA hydratase/conjugal transfer protein TraR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	4,147,133	1	.	G	90.0%	105.5 / 22.2	71	intergenic (+385/‑636)	RPPX_18425/RPPX_18430	enoyl‑CoA hydratase/conjugal transfer protein TraR
Reads supporting (aligned to +/- strand): ref base . (3/4); new base G (39/24); total (42/29)
Fisher's exact test for biased strand distribution p-value = 4.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP009974	4,147,133	2	.	C	90.1%	108.5 / 22.0	71	intergenic (+385/‑636)	RPPX_18425/RPPX_18430	enoyl‑CoA hydratase/conjugal transfer protein TraR
Reads supporting (aligned to +/- strand): ref base . (3/4); new base C (39/25); total (42/29)
Fisher's exact test for biased strand distribution p-value = 4.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP009974	4,147,133	3	.	T	90.1%	107.3 / 22.5	71	intergenic (+385/‑636)	RPPX_18425/RPPX_18430	enoyl‑CoA hydratase/conjugal transfer protein TraR
Reads supporting (aligned to +/- strand): ref base . (3/4); new base T (39/25); total (42/29)
Fisher's exact test for biased strand distribution p-value = 4.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01
*	CP009974	4,147,133	4	.	T	90.1%	107.9 / 22.5	71	intergenic (+385/‑636)	RPPX_18425/RPPX_18430	enoyl‑CoA hydratase/conjugal transfer protein TraR
Reads supporting (aligned to +/- strand): ref base . (3/4); new base T (39/25); total (42/29)
Fisher's exact test for biased strand distribution p-value = 4.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*	CP009974	4,147,133	5	.	C	90.1%	108.1 / 22.0	71	intergenic (+385/‑636)	RPPX_18425/RPPX_18430	enoyl‑CoA hydratase/conjugal transfer protein TraR
Reads supporting (aligned to +/- strand): ref base . (3/4); new base C (39/25); total (42/29)
Fisher's exact test for biased strand distribution p-value = 4.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*	CP009974	4,147,133	6	.	T	90.1%	108.2 / 22.5	71	intergenic (+385/‑636)	RPPX_18425/RPPX_18430	enoyl‑CoA hydratase/conjugal transfer protein TraR
Reads supporting (aligned to +/- strand): ref base . (3/4); new base T (39/25); total (42/29)
Fisher's exact test for biased strand distribution p-value = 4.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP009974	4,147,133	7	.	T	90.1%	108.2 / 22.5	71	intergenic (+385/‑636)	RPPX_18425/RPPX_18430	enoyl‑CoA hydratase/conjugal transfer protein TraR
Reads supporting (aligned to +/- strand): ref base . (3/4); new base T (39/25); total (42/29)
Fisher's exact test for biased strand distribution p-value = 4.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 101 total aligned reads displayed.

AGCGGAGCGTAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTC  >  CP009974/4146983‑4147246

                                                                                                                                                       |||||||

ggcgcagcgcaGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTc                                                                                                                          <  2:4386812/150‑1 (MQ=255)

agcgcagcgcAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTc                                                                                                                          <  1:4407876/151‑1 (MQ=255)

agcgcagcgcAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTc                                                                                                                          <  2:1086046/151‑1 (MQ=25)

 gcgcagcgCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑g                                                                                                                  <  2:2321619/147‑1 (MQ=255)

   gcagcgCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gct                                                                                                                <  2:4417673/149‑1 (MQ=25)

     agcgCAGGGGCCGGATGGTGGGAGAGCAGCGTTTTTTGGTTACTTTTTGTAGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGCGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttc                                                                                                              <  2:650951/151‑1 (MQ=255)

     agcgCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttc                                                                                                              <  1:216949/151‑1 (MQ=21)

      gcgcaGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttct                                                                                                             <  1:2380101/147‑1 (MQ=25)

      gcgcaGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttct                                                                                                             <  1:2379718/147‑1 (MQ=25)

       cgcaGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttctt                                                                                                            <  2:4374339/148‑1 (MQ=25)

        gcaGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg                                                                                                           <  1:1917792/149‑1 (MQ=25)

        gcaGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg                                                                                                           <  2:4766725/149‑1 (MQ=37)

        gcaGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttg                                                                                                           <  1:3831498/149‑1 (MQ=25)

         caGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgc                                                                                                          <  1:1412181/150‑1 (MQ=38)

             ggCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttct                                                                                                      <  1:4187139/151‑1 (MQ=38)

              gCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttctt                                                                                                     <  2:1841978/151‑1 (MQ=38)

              gCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttctt                                                                                                     <  2:5219141/151‑1 (MQ=38)

              gCCGGATGATGGGAGCGCAGCGTTTTGTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttctt                                                                                                     <  2:4410401/151‑1 (MQ=38)

               ccGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttcttg                                                                                                    >  1:2190766/1‑151 (MQ=38)

                 ggATAATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttcttgct                                                                                                  <  1:259781/151‑1 (MQ=38)

                  gatgatGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttcttgctt                                                                                                 <  2:274974/151‑1 (MQ=38)

                   atgatgGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttcttgcttc                                                                                                <  1:1241981/151‑1 (MQ=38)

                    tgatgGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttcttgcttct                                                                                               <  1:894504/151‑1 (MQ=38)

                     gatgGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttcttgcttctt                                                                                              <  2:853511/151‑1 (MQ=38)

                       tgGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttcttgcttcttgc                                                                                            <  2:3615859/151‑1 (MQ=38)

                        gggAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttcttgcttcttgct                                                                                           <  1:745712/151‑1 (MQ=38)

                          gAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttcttgcttcttgcttc                                                                                         <  2:2473326/151‑1 (MQ=37)

                              gcAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttcttgcttcttgcttcttgc                                                                                     <  1:4748305/151‑1 (MQ=38)

                                   gTTTTTTGGTTACTTTTTGGCGCGTTTGACAAAAAGTGTCTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑gcttcttgcttcttgcttcttgcttcttgcttctt                                                                                <  1:4720123/151‑1 (MQ=255)

                                     tttttGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑Gcttcttgcttcttgcttcttgcttcttgcttcttgc                                                                              >  1:3120916/1‑150 (MQ=38)

                                      ttttGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAATGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGGGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑Gcttcttgcttcttgcttcttgcttcttgcttcttgct                                                                             <  2:5049354/151‑3 (MQ=255)

                                      ttttGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑Gcttcttgcttcttgcttcttgcttcttgcttcttgct                                                                             <  2:2594950/151‑3 (MQ=38)

                                        ttGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑Gcttcttgcttcttgcttcttgcttcttgcttcttgcttc                                                                           <  1:4775359/151‑5 (MQ=255)

                                           gTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGTGCGAAACGGTGAGTCAGCGCCGCCACCGCAAATGGACGGTTCACTGATCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCCTCTTGCTTCGTGCTTCTTggttctcg                                                                        >  2:1255850/1‑145 (MQ=11)

                                                        gcgTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑Gcttcttgcttcttgcttcttgcttcttgcttcttgct                                                                             >  1:1911666/1‑131 (MQ=255)

                                                        gcgTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑Gcttcttgcttcttgcttcttgcttcttgcttcttgct                                                                             <  2:1911666/133‑3 (MQ=255)

                                                                  aaaaGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTa                                                        >  2:3775619/1‑151 (MQ=14)

                                                                  aaaaGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTa                                                        >  1:1563344/1‑151 (MQ=14)

                                                                  aaaaGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTa                                                        >  2:2254477/1‑151 (MQ=14)

                                                                  aaaaGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTa                                                        >  1:4995771/1‑151 (MQ=14)

                                                                    aaGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAgg                                                      >  2:584330/1‑151 (MQ=14)

                                                                      gTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTa                                                    >  1:3514401/1‑151 (MQ=14)

                                                                       tGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTat                                                   >  1:95685/1‑151 (MQ=14)

                                                                        gACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTatt                                                  >  1:345427/1‑151 (MQ=14)

                                                                              ccGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTattcattcg                                            >  2:512009/1‑150 (MQ=11)

                                                                               cGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTattcattcgc                                           >  1:1683990/1‑149 (MQ=11)

                                                                                gTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTcgcg                                          >  1:4025173/1‑151 (MQ=11)

                                                                                gTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTcgcg                                          >  1:2214488/1‑151 (MQ=11)

                                                                                 tAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCCTTCgcgc                                         >  2:3651777/1‑151 (MQ=11)

                                                                                 tAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCgcgc                                         >  1:4269554/1‑151 (MQ=11)

                                                                                 tAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCgcgc                                         <  1:1292137/151‑1 (MQ=11)

                                                                                 tAAGGGCCAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCgcgc                                         <  2:3202665/151‑1 (MQ=11)

                                                                                  aaGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCa                                        >  2:3767559/1‑151 (MQ=11)

                                                                                   aGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCag                                       <  1:1279773/151‑2 (MQ=11)

                                                                                    gggCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCagg                                      >  1:3233181/1‑149 (MQ=11)

                                                                                     ggCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCaggt                                     >  2:4565355/1‑148 (MQ=11)

                                                                                     ggCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGt                                     <  1:4941841/151‑1 (MQ=11)

                                                                                      gCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTg                                    >  2:2268442/1‑151 (MQ=11)

                                                                                       cGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTgg                                   >  2:3176323/1‑151 (MQ=11)

                                                                                        gAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGgc                                  >  2:1840035/1‑151 (MQ=11)

                                                                                        gAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGgc                                  >  1:285785/1‑151 (MQ=11)

                                                                                        gAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGgc                                  <  1:2172156/151‑1 (MQ=11)

                                                                                         aaaaGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGgcg                                 <  2:1145600/151‑1 (MQ=11)

                                                                                          aaaGGTGAGTCAGCGTCGCCATCGCAAGTGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGgcgc                                >  2:4071716/1‑151 (MQ=11)

                                                                                          aaaGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGgcgc                                >  1:2603871/1‑151 (MQ=11)

                                                                                          aaaGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGgcgc                                >  2:448572/1‑151 (MQ=11)

                                                                                           aaGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCa                               >  1:1261695/1‑151 (MQ=11)

                                                                                             ggTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATa                             <  2:5058405/151‑1 (MQ=11)

                                                                                              gTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAg                            >  2:4743152/1‑151 (MQ=11)

                                                                                               tGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGt                           <  1:4721095/151‑1 (MQ=11)

                                                                                               tGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGt                           <  2:1161906/151‑1 (MQ=11)

                                                                                                gAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTc                          <  2:3092968/151‑1 (MQ=11)

                                                                                                gAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTc                          <  2:40469/151‑1 (MQ=11)

                                                                                                  gTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCCTAGTCAc                        >  2:404306/1‑151 (MQ=11)

                                                                                                  gTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCAc                        <  2:3801178/151‑1 (MQ=11)

                                                                                                  gTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCAc                        <  2:2196851/151‑1 (MQ=11)

                                                                                                  gTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCAc                        <  2:5170870/151‑1 (MQ=11)

                                                                                                   tCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCAcc                       <  2:2190766/151‑1 (MQ=11)

                                                                                                     aGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCtt                     >  2:104930/1‑151 (MQ=11)

                                                                                                     aGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCtt                     >  1:3903814/1‑151 (MQ=11)

                                                                                                     aGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCtt                     >  1:581185/1‑151 (MQ=11)

                                                                                                       cGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTc                   >  1:1333256/1‑151 (MQ=11)

                                                                                                       cGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTc                   >  1:4072577/1‑151 (MQ=11)

                                                                                                        gTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCtttac                  <  2:1754817/151‑3 (MQ=11)

                                                                                                        gTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTcc                  <  2:1754818/151‑1 (MQ=11)

                                                                                                        gTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTcc                  <  1:873288/151‑1 (MQ=11)

                                                                                                        gTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTAGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTcc                  >  1:3070718/1‑151 (MQ=11)

                                                                                                         tCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCg                 >  2:4123263/1‑151 (MQ=11)

                                                                                                         tCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCg                 >  2:1249817/1‑151 (MQ=11)

                                                                                                          cGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGc                >  1:7982/1‑151 (MQ=11)

                                                                                                          cGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGc                <  1:1021427/151‑1 (MQ=11)

                                                                                                            ccATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGATTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGccc              <  2:2603737/151‑1 (MQ=11)

                                                                                                             cATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCt             >  1:2919498/1‑151 (MQ=11)

                                                                                                             cATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCt             >  1:2247284/1‑151 (MQ=11)

                                                                                                               tCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTa           <  2:189014/151‑1 (MQ=11)

                                                                                                               tCGCAAATGGACTCTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTa           <  1:5046223/151‑1 (MQ=11)

                                                                                                                   aaaTGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTAcggc       >  1:3363215/1‑151 (MQ=11)

                                                                                                                     aTGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTAcggcgg     <  1:2832746/151‑1 (MQ=11)

                                                                                                                      tGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCggg    <  2:7982/151‑1 (MQ=11)

                                                                                                                        gACTGTTCACTGAGCCAAAACAGACGAGTTCACTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTAGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTc  <  1:447663/151‑1 (MQ=11)

                                                                                                                                                       |||||||

AGCGGAGCGTAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTC  >  CP009974/4146983‑4147246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCG  >  CP009974/4147020‑4147311

TTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGC                                                                                                                                               >  SRR10918231.3135165/1‑151 (MQ=32)

   TTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGcttc                                                                                                                                            <  SRR10918231.4798236/151‑5 (MQ=33)

       TTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGcttcttgg                                                                                                                                        <  SRR10918231.3117680/151‑9 (MQ=33)

                  CGCGTTTGACAAAACGTGACTCGACGTACGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATT                                                                                                                                    <  SRR10918231.428821/151‑1 (MQ=27)

                  CGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATT                                                                                                                                    <  SRR10918231.2327157/151‑1 (MQ=29)

                   GCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGctagatcggaagagcacacg                                                                                                                            >  SRR10918231.1920267/1‑131 (MQ=34)

                     GTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCAC                                                                                                                                 <  SRR10918231.359020/151‑1 (MQ=29)

                     GTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCAC                                                                                                                                 <  SRR10918231.1688871/151‑1 (MQ=29)

                     GTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCAC                                                                                                                                 <  SRR10918231.359214/151‑1 (MQ=29)

                        TGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATC                                                                                                                              <  SRR10918231.2732064/151‑1 (MQ=29)

                            AAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGT                                                                                                                          <  SRR10918231.2619928/151‑1 (MQ=29)

                             AAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTA                                                                                                                         >  SRR10918231.5019965/1‑151 (MQ=29)

                             AAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTA                                                                                                                         >  SRR10918231.1570539/1‑151 (MQ=29)

                                 GTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTA                                                                                                                     >  SRR10918231.3530426/1‑151 (MQ=29)

                                  TGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTAT                                                                                                                    >  SRR10918231.96045/1‑151 (MQ=29)

                                   GACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATT                                                                                                                   >  SRR10918231.346680/1‑151 (MQ=29)

                                    ACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTCTTGCTTATTGCTTCTTGCTTCTTGCTTCTTGCTTCTTTGATGTGGGCATTCACATCGAtaatgtattc                                                                                                                  >  SRR10918231.1590045/1‑141 (MQ=29)

                                          CGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGC                                                                                                            >  SRR10918231.1691751/1‑151 (MQ=25)

                                           GTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCG                                                                                                           >  SRR10918231.2224422/1‑151 (MQ=23)

                                           GTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCG                                                                                                           >  SRR10918231.4044081/1‑151 (MQ=23)

                                            TAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGC                                                                                                          >  SRR10918231.4289797/1‑151 (MQ=21)

                                            TAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGC                                                                                                          <  SRR10918231.1298384/151‑1 (MQ=21)

                                              AGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAG                                                                                                        <  SRR10918231.1285936/151‑1 (MQ=17)

                                               GGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGG                                                                                                       >  SRR10918231.3247878/1‑151 (MQ=15)

                                                GGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGT                                                                                                      <  SRR10918231.4965709/151‑1 (MQ=10)

                                                   GAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGC                                                                                                   <  SRR10918231.2181906/151‑1 (MQ=6)

                                                   GAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGC                                                                                                   >  SRR10918231.286800/1‑151 (MQ=6)

                                                     AAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGC                                                                                                 >  SRR10918231.2615873/1‑151 (MQ=6)

                                                      AAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCA                                                                                                >  SRR10918231.1267760/1‑151 (MQ=6)

                                                          TGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGT                                                                                            <  SRR10918231.4743672/151‑1 (MQ=6)

                                                                AGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTT                                                                                      >  SRR10918231.3922005/1‑151 (MQ=6)

                                                                AGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTT                                                                                      >  SRR10918231.583306/1‑151 (MQ=6)

                                                                  CGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTC                                                                                    >  SRR10918231.4091732/1‑151 (MQ=6)

                                                                  CGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTC                                                                                    >  SRR10918231.1339641/1‑151 (MQ=6)

                                                                   GTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCC                                                                                   <  SRR10918231.876964/151‑1 (MQ=6)

                                                                   GTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTAGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCC                                                                                   >  SRR10918231.3084755/1‑151 (MQ=6)

                                                                     CGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGC                                                                                 >  SRR10918231.8020/1‑151 (MQ=6)

                                                                     CGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGC                                                                                 <  SRR10918231.1026020/151‑1 (MQ=6)

                                                                        CATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCT                                                                              >  SRR10918231.2932837/1‑151 (MQ=6)

                                                                        CATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCT                                                                              >  SRR10918231.2257399/1‑151 (MQ=6)

                                                                          TCGCAAATGGACTCTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTA                                                                            <  SRR10918231.5070782/151‑1 (MQ=6)

                                                                              AAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGC                                                                        >  SRR10918231.3378458/1‑151 (MQ=6)

                                                                                ATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGG                                                                      <  SRR10918231.2845721/151‑1 (MQ=6)

                                                                                   GACTGTTCACTGAGCCAAAACAGACGAGTTCACTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTAGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTC                                                                   <  SRR10918231.449282/151‑1 (MQ=6)

                                                                                     CTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCAC                                                                 <  SRR10918231.2264623/151‑1 (MQ=6)

                                                                                       GTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTT                                                               >  SRR10918231.1874048/1‑151 (MQ=4)

                                                                                        TTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTT                                                              <  SRR10918231.3061661/151‑1 (MQ=2)

                                                                                        TTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTT                                                              <  SRR10918231.1187457/151‑1 (MQ=2)

                                                                                           ACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCGCGCAGGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTG                                                           >  SRR10918231.2868467/1‑151 (MQ=0)

                                                                                            CTGAGTCAAAACAGACGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG                                                                                                                                                >  SRR10918231.4374576/1‑51 (MQ=0)

                                                                                                             AGTTC‑‑‑‑‑‑‑GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAA                                  >  SRR10918231.4070070/1‑151 (MQ=0)

                                                                                                                TC‑‑‑‑‑‑‑GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAA                               >  SRR10918231.3083040/1‑151 (MQ=0)

                                                                                                                         GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATCCACATTGAGTAGGTATTCATTCGCGCAGGTGGCG                                                                                                  <  SRR10918231.3900729/82‑1 (MQ=0)

                                                                                                                         GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATCCACATTGAGTAGGTATTCATTCGCGCAG                                                                                                        <  SRR10918231.1213864/76‑1 (MQ=15)

                                                                                                                         GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATCCACATTGAGTAGGTATTCATTCGCGCA                                                                                                         <  SRR10918231.187092/75‑1 (MQ=20)

                                                                                                                         GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG                                                                                                                                                <  SRR10918231.3461537/36‑1 (MQ=0)

                                                                                                                         GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG                                                                                                                                                <  SRR10918231.1659904/36‑1 (MQ=0)

                                                                                                                          CTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG                                                                                                                                                >  SRR10918231.4494270/1‑35 (MQ=0)

                                                                                                                           TTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCT                           >  SRR10918231.923759/1‑151 (MQ=0)

                                                                                                                            TC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG                                                                                                                                                <  SRR10918231.4515102/33‑1 (MQ=0)

                                                                                                                                     TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG                                                                                                                                                >  SRR10918231.1382957/1‑31 (MQ=0)

                                                                                                                                     TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG                                                                                                                                                <  SRR10918231.1768136/31‑1 (MQ=0)

                                                                                                                                     TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTG                                                                                                                                                <  SRR10918231.3910507/31‑1 (MQ=0)

                                                                                                                                          TCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGgctccta                   >  SRR10918231.3706193/1‑144 (MQ=0)

                                                                                                                                                       TTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGC‑CTCCTAACAACCGGCCCCT     >  SRR10918231.179995/1‑151 (MQ=0)

                                                                                                                                                       TTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCT     >  SRR10918231.3486344/1‑151 (MQ=0)

                                                                                                                                                          TTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCG  >  SRR10918231.1163144/1‑151 (MQ=0)

TTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTC‑‑‑‑‑‑‑TTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCG  >  CP009974/4147020‑4147311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`