Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F86 I0 R1	593	297.4	9515568	94.4%	8982696	150.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP009273	3,860,159	C→A	100%	P33P (CCG→CCT)	ibpB ←	heat shock chaperone

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	3,860,159	0	C	A	96.2%	634.6 / 10.9	225	P33P (CCG→CCT)	ibpB	heat shock chaperone
Reads supporting (aligned to +/- strand): ref base C (5/5); new base A (82/122); total (98/127)
Fisher's exact test for biased strand distribution p-value = 5.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as polymorphism: Frequency below/above cutoff threshold.

Only 100 of 231 total aligned reads displayed.

TTTTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGATTC  >  CP009273/3860012‑3860308

ttttttCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTAcggagg                                                                                                                                                        <  1:2580889/150‑1 (MQ=255)

 tttttCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTCTCAATGGTGTAAGGAggg                                                                                                                                                       >  2:2507814/1‑150 (MQ=255)

  ttttCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGa                                                                                                                                                      <  1:3417825/150‑1 (MQ=255)

  ttttCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTGTACGGAGGGa                                                                                                                                                      >  2:3990962/1‑150 (MQ=255)

    ttCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATTTTGTAAGGAGGGAAg                                                                                                                                                    >  1:724454/1‑150 (MQ=255)

     tctcTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTTTAAATGTTTTTAGGGGGGAAGc                                                                                                                                                   >  1:1230451/1‑150 (MQ=255)

      ctctTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGct                                                                                                                                                  <  2:3136900/150‑1 (MQ=255)

       tcttctTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGctc                                                                                                                                                 >  2:2159756/1‑150 (MQ=255)

       tcttctTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGctc                                                                                                                                                 <  1:4163187/150‑1 (MQ=255)

       tcttctTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGctc                                                                                                                                                 <  1:2842897/150‑1 (MQ=255)

        cttcttTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGctct                                                                                                                                                <  2:2751782/150‑1 (MQ=255)

        cttcttTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGctct                                                                                                                                                <  2:2974880/150‑1 (MQ=255)

           cttTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTAAATGTTTTTCGGGGGGGAGCGATGGc                                                                                                                                             >  1:2058986/1‑150 (MQ=255)

           cttTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAAAGTTGTAAGGTGGGAAGCTCTGGc                                                                                                                                             >  1:3152717/1‑150 (MQ=255)

            ttttGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAAAGTTGTACGGAGGGAAGCTCTGGca                                                                                                                                            >  2:358977/1‑149 (MQ=255)

            ttttGGCTGCTCCGGCGTGCCTGTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAACCCTGCCAGCGCAAGGGTCATGCGGTAGTGGTGATCGTCGCTGTTCTCCATGGTGTACGGAGGGCAGCTCTGGca                                                                                                                                            >  2:357632/1‑149 (MQ=255)

               tGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTc                                                                                                                                         <  2:2332410/150‑1 (MQ=255)

                ggCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCa                                                                                                                                        <  2:290037/150‑1 (MQ=255)

                 gctgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTTCGGAGGGAAGCTCTGGCTTTCaa                                                                                                                                       >  1:4620188/1‑149 (MQ=255)

                 gctgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAAAGTTGTACGGAGGGCAGCTCTGGCTTTCAc                                                                                                                                       >  2:2066697/1‑150 (MQ=255)

                 gctgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTGTGAAAGTTGTTAGGAGGGACGCCCTGGCGTTCAc                                                                                                                                       >  1:3603372/1‑150 (MQ=255)

                   tgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTTTACGGAGGGAAGCTCTTGCTTTCACCg                                                                                                                                     >  2:3952171/1‑150 (MQ=255)

                   tgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTAAGGAGGGAAGCTCTGGCTTTCACCg                                                                                                                                     >  2:1561064/1‑150 (MQ=255)

                   tgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAAGGTTGTACGGAGGGAAGCTCTGGCTTTCACCg                                                                                                                                     >  2:555287/1‑150 (MQ=255)

                   tgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTTTTCGGAGGGGAGCGCTGGCTTTCACCg                                                                                                                                     >  1:348466/1‑150 (MQ=255)

                        cGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑Gtt                                                                                                                               >  2:1086825/1‑150 (MQ=255)

                           cGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTg                                                                                                                            <  1:2480694/150‑1 (MQ=255)

                              gCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAg                                                                                                                         <  2:3817467/150‑1 (MQ=255)

                                 ttttACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTATCAATGGTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGc                                                                                                                      >  2:996568/1‑150 (MQ=255)

                                    tACGCTCAGGCGCGTACCGTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑tt                                                                                                                  <  2:3663688/150‑1 (MQ=255)

                                     aCGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTg                                                                                                                 <  2:26561/150‑1 (MQ=255)

                                      cGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTGAATGTTGTAAGGCGGGGAGCTCAGGCTTTCACCGGC‑GGTTGTCGGTGCG‑GTgg                                                                                                                >  1:4072700/1‑150 (MQ=255)

                                       gCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGc                                                                                                               <  2:622538/150‑1 (MQ=255)

                                         tCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCa                                                                                                             <  1:1679851/150‑1 (MQ=255)

                                         tCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTAAATGTTGTACGGAGGGAAGCTCTGGGTTTAACCGGC‑GTTTTGCAGTGCG‑TTGGccc                                                                                                             >  2:1457931/1‑149 (MQ=255)

                                          cAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAg                                                                                                            <  1:1491989/150‑1 (MQ=255)

                                          cAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATTTTGTAAGGAGGGAAGCTCGGGCGTTCACCGGC‑GGGTTGCAGTGCG‑GTGGGCac                                                                                                            >  1:2649106/1‑149 (MQ=255)

                                             gcgcGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGttt                                                                                                         <  1:2159756/150‑1 (MQ=255)

                                             gcgcGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGttt                                                                                                         <  2:3436388/150‑1 (MQ=255)

                                               gcgTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGt                                                                                                       <  2:4721390/150‑1 (MQ=255)

                                                  tACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCaa                                                                                                    <  1:2528841/150‑1 (MQ=255)

                                                   aCCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATAAATTTTTTAAGGAGGGTAGCTCTTGCTTTAAACCGC‑GGTTTTGAGTGCG‑TTTGCCACTTTTTGaaa                                                                                                   >  1:2961600/1‑150 (MQ=255)

                                                    ccTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATAAAAGTTGTAAGGAGGGGACCGCTGGCTTTAACCCGCGGTTTTGC‑GTTCG‑GTGGGCAGTTTTTGaaaa                                                                                                  >  1:3784575/1‑150 (MQ=255)

                                                       tCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTTTAAGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGGG‑TTGGCCCGTTTGTCAAAACCg                                                                                               >  2:2717479/1‑150 (MQ=255)

                                                       tCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTAACCCGC‑GTTTTTCAGTGCG‑TTTGCCAGTTTTTAAAAAccc                                                                                               >  1:1939813/1‑149 (MQ=255)

                                                          aGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑c                                                                                           <  2:3628471/150‑1 (MQ=255)

                                                            ttGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCa                                                                                         <  1:1197445/150‑1 (MQ=255)

                                                            ttGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAAATTTGTAAGGAGGGTAGCTCTGGGTTTAAACGGC‑GTTTTTGCGTGCGTTTGGCCGGTTTTGAAAAAccataac                                                                                           >  1:908815/1‑145 (MQ=255)

                                                             tGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCAt                                                                                        <  1:4636917/150‑1 (MQ=255)

                                                             tGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGGTGTACGGAGGGAAGCTCTGGCGTTCACCGGC‑GGTTTGCAGTGCG‑GTGGCCAGTTTGTCAAAACCGAtacct                                                                                         >  2:1446174/1‑146 (MQ=255)

                                                              gAATCTCTAAATCGTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCAtt                                                                                       <  2:4637322/150‑1 (MQ=255)

                                                                aTCTCTAAATCTTCCTGTCGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGa                                                                                     <  1:2428840/150‑1 (MQ=255)

                                                                 tctcTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGAc                                                                                    <  1:3833886/150‑1 (MQ=255)

                                                                  ctctAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACg                                                                                   <  1:3520975/150‑1 (MQ=255)

                                                                   tctAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTTCGGAGGGAAGCTCTGGCGTTCACCGGC‑GTTTTGCAGTGCG‑TTTGCCCGGTTGTCAAAACCGAT‑CCATTGACGc                                                                                  >  2:1919694/1‑150 (MQ=255)

                                                                     tAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTCAATGTTGTACGGCGGGAAGCTCGGGCTTTCACCGGC‑GGTTTGCAGTGCG‑GTGGCCCGGGTGTGCAAACCCCT‑CCAGTGACGcct                                                                                >  2:2879337/1‑148 (MQ=255)

                                                                        aTCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTGTTCGGAGGGAAGCTCTGGCGTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTTTCAAAACCGAT‑CCATTGACGCATCAg                                                                             >  2:351121/1‑150 (MQ=255)

                                                                          cTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTg                                                                           <  2:66291/150‑1 (MQ=255)

                                                                          cTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTATCAATTTTTTTCGGAGGGGAGCTCTGGCGTTCACCGGC‑GGTTTTCTGTGCG‑TTGGGCAGGTTGTCAAAAACGCT‑CCCGTGTCGCATCAGTg                                                                           >  2:24815/1‑150 (MQ=255)

                                                                           ttCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGTAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCATATCCGAT‑CCATTGACGCATCAGTgg                                                                          <  2:336833/150‑1 (MQ=255)

                                                                           ttCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTgg                                                                          <  2:264116/150‑1 (MQ=255)

                                                                               tGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGAt                                                                      <  1:3393826/150‑1 (MQ=255)

                                                                                gACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATa                                                                     <  1:1703970/150‑1 (MQ=255)

                                                                                gACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GGGTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATa                                                                     >  2:3456593/1‑150 (MQ=255)

                                                                                   ggAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAAt                                                                  <  1:3464898/150‑1 (MQ=255)

                                                                                     aaaCCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCg                                                                <  2:4324369/150‑1 (MQ=255)

                                                                                     aaaCCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCg                                                                <  2:1382327/150‑1 (MQ=255)

                                                                                     aaaCCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCg                                                                <  1:805792/150‑1 (MQ=255)

                                                                                     aaaCCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GGTTTGCCGTGCG‑TTGGCCAGTTTGTCAAAAACGAT‑ACATTGACGCATCAGTGGGGATAAAtac                                                                >  2:3912532/1‑148 (MQ=255)

                                                                                      aaCCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCGTTCACCCGC‑GGTTTTCAGTTCG‑TTTGGCCGTTTTTAAAAAACGAT‑CCAATGACGCCACAGTGGGGATAAATCGa                                                               >  1:1909626/1‑150 (MQ=255)

                                                                                        ccTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAg                                                             <  2:1208619/150‑1 (MQ=255)

                                                                                          tGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGtt                                                           <  2:3024031/150‑1 (MQ=255)

                                                                                           gCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTAAATTTTTTTAGGTGGGAAGCTCTGGCGTTCAACGGC‑GGTTTTGAGTTCG‑TTTGCCAAGTTTTAAAAACCCAT‑ACCTTTTCGCATCAGGGGGGAGAAATAGAAGTTa                                                          >  2:1605482/1‑150 (MQ=255)

                                                                                           gCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTa                                                          <  1:4431750/150‑1 (MQ=255)

                                                                                           gCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAAAGTTTTTCGGGGGGTAGCTATGGCGTTGAACCGC‑GGGTTTGAGGGCG‑GTGGCCAGTTTTTCAAAAACGAT‑CCAAAGTCGCCGCAGTGGGGGTAAAAAGAAGTTa                                                          >  2:925320/1‑150 (MQ=255)

                                                                                            ccAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTAc                                                         <  1:2693385/150‑1 (MQ=255)

                                                                                            ccAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTAc                                                         <  1:2768214/150‑1 (MQ=255)

                                                                                              aGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTGTACGGAGGGAAGCTCTGGCTTTAACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTTTCAAAAACGAT‑ACATTTACGCATCAGTGGGGATAAATCGAAGTTACGc                                                       >  2:2247699/1‑150 (MQ=255)

                                                                                              aGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTCTCAATGTTGTTCGGAGGGTAGCTCTGGCTTTCACCGGG‑GGTTTGCAGTGCG‑TTGGGCAGTTTGTGAAAAACGATACCATT‑ACGCATGAGTGGGGGTAAATAGGAGGTACGc                                                       >  2:1006070/1‑150 (MQ=255)

                                                                                              aGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTATTAAAGTTTTACGGAGGGTAGCTCTGGCGTTAACACGC‑GGTTTTCAGTGCG‑TTTGGCAGGTTTTGAAAAAACAA‑ACAGTTAAGCAACACTGGGGGTAAAAAGAAGTTAccc                                                       >  2:430930/1‑148 (MQ=255)

                                                                                                cgcAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCAt                                                     <  2:2301165/150‑1 (MQ=255)

                                                                                                  cAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAg                                                   <  1:332607/150‑1 (MQ=255)

                                                                                                    aGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTc                                                 <  1:3719264/150‑1 (MQ=255)

                                                                                                         aaTGCGGTAGTGGTTATCGTCGCTTTTCTCCATGGTGTACGGAGGGGAGCTCGTGCGTTCAACGGC‑GGTTTGCAGTGCG‑TTTGCCCGTTTTTAAAAAACGAT‑CCCATGACGCATCATGGGGGATAAATAGCAGTTAAGCAAAGTCAATtc                                            >  2:163369/1‑150 (MQ=255)

                                                                                                         aaTGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCACTTTGTCAAAACCGAT‑CCATTTACCCCACCGGGGGGATAAAACGAAGTTACGCAAAGTCAttta                                            >  2:4311836/1‑149 (MQ=255)

                                                                                                              ggTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCtt                                       <  1:3933596/150‑1 (MQ=255)

                                                                                                                       tATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGc                              <  1:2331872/150‑1 (MQ=255)

                                                                                                                         tggtcgCTTTTCTCTATGTTGTACGGAGGGAAGCTCTGGCTTTCTCCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTTCGCATAGTCATTTCTCCTTCTAAGAAGCGa                            <  1:1039137/148‑1 (MQ=255)

                                                                                                                         tcgtcgCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGa                            <  2:3971199/150‑1 (MQ=255)

                                                                                                                         tcgtcgCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGa                            <  2:1931338/150‑1 (MQ=255)

                                                                                                                          cgtcgCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGag                           <  1:1750159/150‑1 (MQ=255)

                                                                                                                            tcgCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagta                         <  2:4028397/150‑1 (MQ=255)

                                                                                                                             cgCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagtaa                        <  2:3553486/150‑1 (MQ=255)

                                                                                                                                 tttCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTAc                    >  2:699383/1‑150 (MQ=255)

                                                                                                                                    ctcAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTg                 >  2:3405793/1‑150 (MQ=255)

                                                                                                                                     tcAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGc                >  2:4566290/1‑150 (MQ=255)

                                                                                                                                      cAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCa               >  2:4241119/1‑150 (MQ=255)

                                                                                                                                       aaTGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCaa              >  2:1865947/1‑150 (MQ=255)

                                                                                                                                                cggaggGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGa     >  1:555412/1‑150 (MQ=255)

                                                                                                                                                   cggGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGATTc  <  1:2257219/150‑1 (MQ=255)

TTTTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGC‑GTTTTGCAGTGCG‑TTGGCCAGTTTGTCAAAACCGAT‑CCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGATTC  >  CP009273/3860012‑3860308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CATTTTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGATTC  >  CP009273/3860010‑3860308

CATTTTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGA                                                                                                                                                       <  SRR19973082.232232/150‑1 (MQ=60)

CATTTTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGA                                                                                                                                                       <  SRR19973082.1292265/150‑1 (MQ=60)

 ATTTTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAG                                                                                                                                                      <  SRR19973082.2617474/150‑1 (MQ=60)

  TTTTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGG                                                                                                                                                     <  SRR19973082.2596920/150‑1 (MQ=60)

  TTTTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGG                                                                                                                                                     <  SRR19973082.2596950/150‑1 (MQ=60)

   TTTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTATCAATGTTGTACGGAGGG                                                                                                                                                    >  SRR19973082.3886778/1‑150 (MQ=60)

    TTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGA                                                                                                                                                   <  SRR19973082.3438911/150‑1 (MQ=60)

      TTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATTTTGTAAGGAGGGAAG                                                                                                                                                 >  SRR19973082.729272/1‑150 (MQ=60)

         TCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTC                                                                                                                                              <  SRR19973082.2860351/150‑1 (MQ=60)

         TCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTC                                                                                                                                              <  SRR19973082.4188586/150‑1 (MQ=60)

         TCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTC                                                                                                                                              <  SRR19973082.4188666/150‑1 (MQ=60)

            TCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTAAATTTTTTACGGGGGGAAGCTCTGG                                                                                                                                           >  SRR19973082.3429017/1‑150 (MQ=60)

             CTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAAAGTTGTAAGGTGGGAAGCTCTGGC                                                                                                                                          >  SRR19973082.3171760/1‑150 (MQ=60)

                 TGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTGTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTC                                                                                                                                      <  SRR19973082.3329755/150‑1 (MQ=60)

                 TGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTC                                                                                                                                      <  SRR19973082.2603190/150‑1 (MQ=60)

                   GCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATTTTTTACGGAGGGAAACTCTGGGTTTGAC                                                                                                                                    >  SRR19973082.4648282/1‑150 (MQ=60)

                   GCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTTCGGAGGGAAGCTCTGGCTTTCAA                                                                                                                                    >  SRR19973082.4648207/1‑150 (MQ=60)

                   GCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCAC                                                                                                                                    <  SRR19973082.1222462/150‑1 (MQ=60)

                   GCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCAC                                                                                                                                    <  SRR19973082.3627830/150‑1 (MQ=60)

                     TGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTTTTCGGAGGGGAGCGCTGGCTTTCACCG                                                                                                                                  >  SRR19973082.350770/1‑150 (MQ=60)

                     TGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATAAATGTTGTACGGAGGGAAGCTCTTGCTTTCAACG                                                                                                                                  >  SRR19973082.349596/1‑150 (MQ=60)

                      GCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAAAGTTGTTCGGAGGGAAGCACTGGCTTTAACCGG                                                                                                                                 >  SRR19973082.2300631/1‑150 (MQ=60)

                          CGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTTTACGGGGGGAAGCTCTGGCTTTaacccgcggt                                                                                                                             >  SRR19973082.359617/1‑140 (MQ=60)

                             CGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTG                                                                                                                          <  SRR19973082.2496182/150‑1 (MQ=60)

                                 CCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGT                                                                                                                      <  SRR19973082.3842901/150‑1 (MQ=60)

                                        CGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTGAATGTTGTAAGGCGGGGAGCTCAGGCTTTCACCGGCGgttgtcggtgcggtgg                                                                                                               >  SRR19973082.4097665/1‑134 (MQ=60)

                                        CGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGG                                                                                                               <  SRR19973082.612679/150‑1 (MQ=60)

                                        CGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTGTCAATGTTGTTCGGCGGGGAGCGCTGGCTgtgacccgcgggtttgcgtgcgttgg                                                                                                               >  SRR19973082.4097592/1‑124 (MQ=60)

                                         GCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATTTTGTACGGAGGGTAGCTATGGCTTTAACCGGCGGGTTTCAGTGCGTTGGC                                                                                                              >  SRR19973082.329443/1‑150 (MQ=60)

                                           TCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCA                                                                                                            <  SRR19973082.1691029/150‑1 (MQ=60)

                                           TCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCA                                                                                                            <  SRR19973082.1691037/150‑1 (MQ=60)

                                            CAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAG                                                                                                           <  SRR19973082.1501971/150‑1 (MQ=60)

                                            CAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATTTTGTAAGGAGGGAAGCTCGGGCGTTCACCGGCGGGTTGCAGTGCGgtgggcac                                                                                                           >  SRR19973082.2665460/1‑142 (MQ=60)

                                              GGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTT                                                                                                         <  SRR19973082.4540092/150‑1 (MQ=60)

                                               GCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTT                                                                                                        <  SRR19973082.2173465/150‑1 (MQ=60)

                                                   GTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAAATTTTTACGGGGGGAAGCGCTGGCTTTCAACGGCGGTTTTCAGTGCGgttgcccgtttttga                                                                                                    >  SRR19973082.4746673/1‑135 (MQ=60)

                                                    TACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAA                                                                                                   <  SRR19973082.2544628/150‑1 (MQ=60)

                                                       CTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAAC                                                                                                <  SRR19973082.2254290/150‑1 (MQ=60)

                                                         TCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCG                                                                                              <  SRR19973082.4424082/150‑1 (MQ=60)

                                                         TCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTAACCCGCGTTTTTCAGTGCGTTTGCCAGTTTttaaaaaccc                                                                                              >  SRR19973082.1952092/1‑140 (MQ=60)

                                                         TCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATAAATTTTGTAAGGAGGGAAGCTCTGGCGTTCAACCGCGGGTTGCAGTGCGGTGTCCAGTTTGTCAAAAACG                                                                                              >  SRR19973082.1952096/1‑150 (MQ=60)

                                                             GTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCC                                                                                          <  SRR19973082.2624701/150‑1 (MQ=60)

                                                              TTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCA                                                                                         <  SRR19973082.1205460/150‑1 (MQ=60)

                                                              TTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTAAGGAGGGAAGCTCTGGCGTTCAACCGCGGTTTGGAGTGCGGTGGGCAGTTTGTaaaaaaccataca                                                                                         >  SRR19973082.1900681/1‑137 (MQ=60)

                                                               TGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTCGAAGTTGTAAGGAGGGAAGCTCTGGCTTTCACCcgcggttttcagtggggttggcaggttgtgaaaaacgaaacat                                                                                        >  SRR19973082.3357814/1‑107 (MQ=60)

                                                               TGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCAT                                                                                        <  SRR19973082.4664998/150‑1 (MQ=60)

                                                                GAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTGTCAATTTTTTAAGGGGGGAAGCTCTGGCTTTAAACGGCGGTTTGGAGTGCGTTGGCCAGTTTGTgaaaaacgatacaaa                                                                                       >  SRR19973082.4754286/1‑135 (MQ=60)

                                                                  ATCTCTAAATCTTCCTGTCGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGA                                                                                     <  SRR19973082.2443930/150‑1 (MQ=60)

                                                                  ATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGA                                                                                     <  SRR19973082.2443543/150‑1 (MQ=60)

                                                                  ATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGA                                                                                     <  SRR19973082.2443506/150‑1 (MQ=60)

                                                                   TCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGAC                                                                                    <  SRR19973082.3857478/150‑1 (MQ=60)

                                                                    CTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTTTAAGGAGGGAAGCTCTGGGGTTCACCGGCGTTTTGCAGTGCGTTGGGCACTTTGTCAAAAACGATCCAGTGAAG                                                                                   >  SRR19973082.804872/1‑150 (MQ=60)

                                                                    CTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTTTAAGGAGGGAACCTCTGGCGTTCACCGGCGTTTTGgagttcgtgtggccctttttcaaaaaacaaccactgacg                                                                                   >  SRR19973082.3024687/1‑111 (MQ=60)

                                                                    CTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACG                                                                                   <  SRR19973082.3542446/150‑1 (MQ=60)

                                                                    CTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACG                                                                                   <  SRR19973082.3542332/150‑1 (MQ=60)

                                                                       TAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAAATTTGTTAGGTGGGAAGCTCTTGCGTTCACCGGCGTgtttggggtggtgtggcaggttttgaaaaaacaaacaatgtcgcaa                                                                                >  SRR19973082.568763/1‑104 (MQ=60)

                                                                                CTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGA                                                                       <  SRR19973082.3747324/150‑1 (MQ=60)

                                                                                CTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTATCAATGTTGTAAGGGGGGAAGCaagggcgttcaaccgcggtttggagtggggtggccagggtgtgaaaaaccatcccatgacgccacactgggga                                                                       >  SRR19973082.3063111/1‑77 (MQ=60)

                                                                                 TGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGAT                                                                      <  SRR19973082.3414791/150‑1 (MQ=60)

                                                                                  GACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATA                                                                     <  SRR19973082.898527/150‑1 (MQ=60)

                                                                                  GACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATA                                                                     <  SRR19973082.1715297/150‑1 (MQ=60)

                                                                                   ACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAA                                                                    <  SRR19973082.1371831/150‑1 (MQ=60)

                                                                                     GGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAAT                                                                  <  SRR19973082.3486181/150‑1 (MQ=60)

                                                                                       AAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCG                                                                <  SRR19973082.810947/150‑1 (MQ=60)

                                                                                       AAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCG                                                                <  SRR19973082.186862/150‑1 (MQ=60)

                                                                                       AAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCG                                                                <  SRR19973082.186518/150‑1 (MQ=60)

                                                                                        AACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCGTTCACCCGCGGTTTTCAGTTCGTTTGGCCGTTTTTAAAAAACGATCCAATGACGCCACAGTGGGGATAAATCGA                                                               >  SRR19973082.1921817/1‑150 (MQ=60)

                                                                                          CCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTCTGAATTTTGTTCGGCGGGgagcgcaggcgttcaaccgcggttttgggtgggttgggcccgttttgaaaaaccaaacctattagccacagtgggggttaataggag                                                             >  SRR19973082.2924753/1‑63 (MQ=58)

                                                                                           CTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGT                                                            <  SRR19973082.282942/150‑1 (MQ=60)

                                                                                           CTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGT                                                            <  SRR19973082.281994/150‑1 (MQ=60)

                                                                                            TGCCAGCGCAAGGGTAATGCGGTAGTTGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTT                                                           <  SRR19973082.3016353/150‑1 (MQ=60)

                                                                                            TGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATACAAGTTGTACGGGGGGAAGCTCTGGCTTTCAaccgcggttttgagtgcggtgggccgtttttcaaaaaccaacccatgacgccaaaagtgggggaaaaagaagtt                                                           >  SRR19973082.3899518/1‑76 (MQ=60)

                                                                                             GCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTA                                                          <  SRR19973082.4457394/150‑1 (MQ=60)

                                                                                             GCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTA                                                          <  SRR19973082.4458609/150‑1 (MQ=60)

                                                                                              CCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTAC                                                         <  SRR19973082.2709890/150‑1 (MQ=60)

                                                                                              CCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTAC                                                         <  SRR19973082.2709869/150‑1 (MQ=60)

                                                                                              CCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTAC                                                         <  SRR19973082.3703943/150‑1 (MQ=60)

                                                                                              CCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTAC                                                         <  SRR19973082.2784926/150‑1 (MQ=60)

                                                                                                    CAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAG                                                   <  SRR19973082.334865/150‑1 (MQ=60)

                                                                                                     AAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGT                                                  <  SRR19973082.963739/150‑1 (MQ=60)

                                                                                                      AGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTC                                                 <  SRR19973082.3742283/150‑1 (MQ=60)

                                                                                                       GGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCA                                                <  SRR19973082.2942212/150‑1 (MQ=60)

                                                                                                       GGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCA                                                <  SRR19973082.2149369/150‑1 (MQ=60)

                                                                                                           AATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGATTGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTC                                            <  SRR19973082.1574755/150‑1 (MQ=60)

                                                                                                            ATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCT                                           <  SRR19973082.821542/150‑1 (MQ=60)

                                                                                                                GGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTT                                       <  SRR19973082.3957540/150‑1 (MQ=60)

                                                                                                                    GTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAA                                   <  SRR19973082.3449137/150‑1 (MQ=60)

                                                                                                                    GTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAA                                   <  SRR19973082.2762355/150‑1 (MQ=60)

                                                                                                                         TATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGC                              <  SRR19973082.2346304/150‑1 (MQ=60)

                                                                                                                           TGGTCGCTTTTCTCTATGTTGTACGGAGGGAAGCTCTGGCTTTCTCCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTTCGCATAGTCATTTCTCCTTCTAAGAAGCGA                            <  SRR19973082.1046314/150‑1 (MQ=60)

                                                                                                                           TCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGA                            <  SRR19973082.3445277/150‑1 (MQ=60)

                                                                                                                           TCGTCGCTATTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGA                            <  SRR19973082.1568170/150‑1 (MQ=60)

                                                                                                                            CGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAG                           <  SRR19973082.1761759/150‑1 (MQ=60)

                                                                                                                            CGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAG                           <  SRR19973082.1760713/150‑1 (MQ=60)

                                                                                                                                   TTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCACCTTCTAAGAAGCGAGTAAGTAC                    >  SRR19973082.3878568/1‑150 (MQ=60)

                                                                                                                                   TTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATACATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTAC                    >  SRR19973082.2141602/1‑150 (MQ=60)

                                                                                                                                                 ACGGAGGGAAGCTCTGGCTTTCACCGGCGTGTTGCAGTTCGTTGGCCACGTTGTCAAAACCGAACCATTGACGCAGCCCTGGGGCTAAAACGAAGATAAGCAAAGTCAATTCTCCATATAAGAAGCCAGTAAGTACCagcaacaaccaac      >  SRR19973082.50419/1‑137 (MQ=36)

                                                                                                                                                  CGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTATAAGAAGCGAGTAAGTACCTGCAAATCCGAAGA     >  SRR19973082.559384/1‑150 (MQ=60)

                                                                                                                                                   GGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGGGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGAT    >  SRR19973082.4649482/1‑150 (MQ=60)

                                                                                                                                                     CGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGATTC  <  SRR19973082.2271386/150‑1 (MQ=60)

                                                                                                                                                     AGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGATTC  <  SRR19973082.10741/150‑1 (MQ=60)

                                                                                                                                                     AGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGATTC  <  SRR19973082.10410/150‑1 (MQ=60)

CATTTTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGCGTTTTGCAGTGCGTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGATTC  >  CP009273/3860010‑3860308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`