Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
A1 F488 I0 R1
|
1275 |
300.1 |
10328444 |
91.0% |
9398884 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
RA |
CP009273 |
955,568 |
A→T |
100% |
intergenic (+17/‑152) |
aroA → / → ycaL |
5‑enolpyruvylshikimate‑3‑phosphate synthetase/putative peptidase‑related chaperone |
|
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
* | CP009273 | 955,568 | 0 | A | T | 97.3%
| 728.1
/ 6.3
| 221 | intergenic (+17/‑152) | aroA/ycaL | 5‑enolpyruvylshikimate‑3‑phosphate synthetase/putative peptidase‑related chaperone |
Reads supporting (aligned to +/- strand): ref base A (5/1); new base T (91/124); total (96/125) |
Fisher's exact test for biased strand distribution p-value = 8.77e-02 |
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 |
Rejected as polymorphism: Frequency below/above cutoff threshold. |
Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
Only 100 of 227 total aligned reads displayed.
ACCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGGAT > CP009273/955421‑955712
|
aCCGGATTGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCaattaa > 1:1435463/1‑150 (MQ=255)
aCCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCaattaa < 1:1173362/150‑1 (MQ=255)
cGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCaattaata > 2:413594/1‑150 (MQ=255)
ggATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAg > 1:1450747/1‑150 (MQ=255)
ggATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAg > 2:1324727/1‑150 (MQ=255)
gATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGc > 2:4163970/1‑150 (MQ=255)
aTGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGcc < 1:5047202/150‑1 (MQ=255)
ggCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCaa > 2:3799541/1‑150 (MQ=255)
ggCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCaa < 1:3585965/150‑1 (MQ=255)
cGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAt < 2:1921929/150‑1 (MQ=255)
cGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAt < 2:4916698/150‑1 (MQ=255)
gATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtc > 1:2375307/1‑150 (MQ=255)
aTGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtct < 1:1489222/150‑1 (MQ=255)
tgtgTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtctt > 2:4214704/1‑150 (MQ=255)
gtgtTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtcttt > 2:4210720/1‑150 (MQ=255)
tgtTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtctttc < 2:1500153/150‑1 (MQ=255)
gtTACTCGCTGGTGGCGTTGTCAGATACACCACTGACGATTCTTGATCCCAACTGCACGGCCAAAACATTTCAGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtctttct < 2:5163213/150‑1 (MQ=255)
ctcGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTAt < 1:1883851/150‑1 (MQ=255)
ctcGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTAt < 2:4280149/150‑1 (MQ=255)
ctcGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTAt < 2:3223003/150‑1 (MQ=255)
tcGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATc > 1:2400393/1‑150 (MQ=255)
cGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCa < 2:2092793/150‑1 (MQ=255)
cTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCaaa < 1:2930581/150‑1 (MQ=255)
ggtggCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAAc < 2:2566821/150‑1 (MQ=255)
gtggCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACg > 1:3471699/1‑150 (MQ=255)
tggCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGt > 1:1160943/1‑150 (MQ=255)
ggCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTc < 1:136755/150‑1 (MQ=255)
cGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCgg < 1:2411894/150‑1 (MQ=255)
tGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGcac < 1:397977/150‑1 (MQ=255)
gTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGcaca < 2:1002110/150‑1 (MQ=255)
aGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTg < 2:526647/150‑1 (MQ=255)
aTACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGTGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTc < 2:4344473/150‑1 (MQ=255)
aTACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTc < 1:78998/150‑1 (MQ=255)
aTACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTc < 1:350662/150‑1 (MQ=255)
acacCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCgg > 1:2205989/1‑150 (MQ=255)
acacCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCgg < 1:2109248/150‑1 (MQ=255)
cacCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGc < 2:1840721/150‑1 (MQ=255)
aGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGttt > 1:2075055/1‑150 (MQ=255)
aGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGttt > 1:3161073/1‑150 (MQ=255)
aGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGttt > 2:1717703/1‑150 (MQ=255)
aCGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGttttttt < 2:2085469/150‑1 (MQ=255)
aCGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGttttttt < 2:3519708/150‑1 (MQ=255)
tGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCt < 1:5160053/150‑1 (MQ=255)
tGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCt > 2:2836985/1‑150 (MQ=255)
tGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCt < 1:3143583/150‑1 (MQ=255)
tGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTCTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGAccg > 1:3120673/1‑149 (MQ=255)
tCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTtgt > 1:1911698/1‑150 (MQ=255)
cccAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTtgtg > 2:3633411/1‑150 (MQ=255)
aaaTGCACGGCAAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGt < 2:3135611/150‑1 (MQ=255)
aTGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCa > 1:4554761/1‑150 (MQ=255)
gCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCAtt > 2:4312239/1‑150 (MQ=255)
cACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCAttt < 1:1653663/150‑1 (MQ=255)
aCGGCAAAAACATTTCCGGATTTTTTCGTGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCAAAATCTTTCTTTATCAAAACGTCGGCACATTTTCGGCGTTTTTTTTCGGACCTTGTGAGTCAtttt < 1:1000381/150‑1 (MQ=255)
gCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGAt < 1:627125/150‑1 (MQ=255)
ccAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGAtt < 1:3841844/150‑1 (MQ=255)
cAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTa > 2:1842294/1‑150 (MQ=255)
aaaaCATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTaa > 2:2015905/1‑150 (MQ=255)
aaCATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATg > 2:838152/1‑150 (MQ=255)
aCATTTCCTGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATgg < 2:3411024/150‑1 (MQ=255)
cATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGt < 2:1300465/150‑1 (MQ=255)
aTTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTa > 2:2352268/1‑150 (MQ=255)
tCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCg > 1:3949147/1‑150 (MQ=255)
tCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCg < 1:3529729/150‑1 (MQ=255)
cGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTc < 1:3646762/150‑1 (MQ=255)
cGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTc < 1:864038/150‑1 (MQ=255)
attattTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCt > 2:2256152/1‑150 (MQ=255)
ttattTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCtt > 2:1269873/1‑150 (MQ=255)
ttattTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCtt < 2:4917823/150‑1 (MQ=255)
ttattTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCtt > 2:1856532/1‑150 (MQ=255)
ttattTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTAATTTTTATTAATGGTAGCGTCGCtt > 2:662760/1‑150 (MQ=255)
attTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGt > 2:3252586/1‑150 (MQ=255)
tttCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGta < 1:2772465/150‑2 (MQ=255)
tCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCaa < 2:1359383/150‑1 (MQ=255)
cGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAAt < 2:3675505/150‑1 (MQ=255)
cGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACATTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAAt > 2:4814598/1‑150 (MQ=255)
agcagcTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGt < 1:4822151/150‑1 (MQ=255)
cagcTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTaa > 2:4774526/1‑150 (MQ=255)
agcTGGCGCTGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCATATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAgt < 2:1525385/150‑1 (MQ=255)
cTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAgtt < 2:1960702/150‑1 (MQ=255)
cTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAgct < 1:1717703/150‑3 (MQ=255)
ggCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAgttgt < 2:451664/150‑1 (MQ=255)
ggCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAgttgt < 1:1314143/150‑1 (MQ=255)
cgcgGATTAGCCAGGCAGCCTGAATGAACACCGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGttgttg < 1:4947141/150‑1 (MQ=255)
cgGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGAt < 1:2596518/150‑1 (MQ=255)
ttAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTTTTGATACat > 2:912730/1‑150 (MQ=255)
aGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACataa < 1:1840844/150‑1 (MQ=255)
ccAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGGTTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACataata > 2:1693504/1‑150 (MQ=255)
ccAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAATTTGTTGATACataata > 2:1092913/1‑150 (MQ=255)
ggCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTAAATGTAAGTTGTTTATAAAAAATAttt > 2:807363/1‑150 (MQ=255)
cAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTtat > 2:2156118/1‑150 (MQ=255)
cAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTtat > 1:3417125/1‑150 (MQ=255)
aGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTtata > 2:1099586/1‑150 (MQ=255)
cTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTAGGACCTTGTGAGTCATTTTGATTAATTGTAGCGTCGCTTGTCAAAGTAAATTTTTTATACAAAATAATTatatat > 1:4408899/1‑150 (MQ=255)
gaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGTGTCATTTTGATTAATGGTAGCGTCGCTTGTGAATGTAAGTTTTTTATAAATAATATTTATATATTATTaa > 1:181167/1‑150 (MQ=255)
caacGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCa > 2:285673/1‑150 (MQ=255)
aacGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCATGTTAGTCATTTTTTTTAATGGTAGCGTCGCGTGTCAAAGTTAGTTTTTTTTAAAAAAAATTTTTATATTTTTaaaaaa > 1:1758705/1‑146 (MQ=255)
cGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACg < 1:3265279/150‑1 (MQ=255)
cGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACg < 1:1842294/150‑1 (MQ=255)
cGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTAGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTTTTGATACATAATATTTATATATTATTAATCAACg > 1:4709154/1‑150 (MQ=255)
gggCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACgg < 1:2937539/150‑1 (MQ=255)
|
ACCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGGAT > CP009273/955421‑955712
|
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGGATGATTC > CP009273/955420‑955717
|
CACCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTA < SRR19973063.4566100/150‑1 (MQ=60)
CACCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTA < SRR19973063.4958991/150‑1 (MQ=60)
CACCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTA < SRR19973063.4959447/150‑1 (MQ=60)
ACCGGATTGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAA > SRR19973063.1439842/1‑150 (MQ=60)
ACCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAA < SRR19973063.1176899/150‑1 (MQ=60)
CGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATA < SRR19973063.1365951/150‑1 (MQ=60)
AGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATA < SRR19973063.1366029/150‑1 (MQ=60)
GGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAG > SRR19973063.1455172/1‑150 (MQ=60)
GATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGC < SRR19973063.2726709/150‑1 (MQ=60)
ATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCC < SRR19973063.2495923/150‑1 (MQ=60)
ATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCC < SRR19973063.5063461/150‑1 (MQ=60)
TGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCA < SRR19973063.1821589/150‑1 (MQ=60)
GGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAA < SRR19973063.3215170/150‑1 (MQ=60)
GGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAA < SRR19973063.3597460/150‑1 (MQ=60)
GATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATC > SRR19973063.2382917/1‑150 (MQ=60)
ATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCT < SRR19973063.1493782/150‑1 (MQ=60)
ATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCT < SRR19973063.1493783/150‑1 (MQ=60)
ATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCT > SRR19973063.4622877/1‑150 (MQ=60)
TTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTT < SRR19973063.501674/150‑1 (MQ=60)
TCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTA < SRR19973063.2122817/150‑1 (MQ=60)
CTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTAT < SRR19973063.1889738/150‑1 (MQ=60)
CTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAAAGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTAT > SRR19973063.3135236/1‑150 (MQ=60)
TCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATC > SRR19973063.2408071/1‑150 (MQ=60)
CTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAA < SRR19973063.2939925/150‑1 (MQ=60)
CTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAA < SRR19973063.2940145/150‑1 (MQ=60)
GTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACG > SRR19973063.3482796/1‑150 (MQ=60)
GTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACG > SRR19973063.3482764/1‑150 (MQ=60)
TGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGT > SRR19973063.1164444/1‑150 (MQ=60)
TGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGT > SRR19973063.1164446/1‑150 (MQ=60)
GGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTC < SRR19973063.238931/150‑1 (MQ=60)
GGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTC < SRR19973063.137187/150‑1 (MQ=60)
GCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCG < SRR19973063.3724043/150‑1 (MQ=60)
CGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGG < SRR19973063.2419474/150‑1 (MQ=60)
CGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGG < SRR19973063.2419610/150‑1 (MQ=60)
TGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCAC < SRR19973063.399107/150‑1 (MQ=60)
GATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGT < SRR19973063.1518554/150‑1 (MQ=60)
GATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGT < SRR19973063.1518514/150‑1 (MQ=60)
ATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTC < SRR19973063.351672/150‑1 (MQ=60)
ATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTC < SRR19973063.3982338/150‑1 (MQ=60)
ATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTC < SRR19973063.79269/150‑1 (MQ=60)
ACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGG < SRR19973063.2115843/150‑1 (MQ=60)
ACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGG > SRR19973063.2212936/1‑150 (MQ=60)
CCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑T < SRR19973063.1727141/150‑1 (MQ=60)
AGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTT > SRR19973063.3171249/1‑150 (MQ=60)
AGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTT > SRR19973063.3171055/1‑150 (MQ=60)
AGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTT > SRR19973063.2081541/1‑150 (MQ=60)
ACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTT > SRR19973063.4170743/1‑150 (MQ=60)
ATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCG < SRR19973063.945057/150‑1 (MQ=60)
TGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCT < SRR19973063.5176653/150‑1 (MQ=60)
TGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCT < SRR19973063.3153691/150‑1 (MQ=60)
TGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTCTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCG > SRR19973063.3130720/1‑150 (MQ=60)
ATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTG < SRR19973063.3653692/150‑1 (MQ=60)
TCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGT < SRR19973063.1426201/150‑1 (MQ=60)
TCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGT > SRR19973063.1917679/1‑150 (MQ=60)
AATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCgtgttgttg > SRR19973063.3586685/1‑141 (MQ=60)
ATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA > SRR19973063.4569354/1‑150 (MQ=60)
TGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTTCGGACCTTGTGAGTCA < SRR19973063.4542817/150‑1 (MQ=60)
CACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTT < SRR19973063.1658710/150‑1 (MQ=60)
ACGGCAAAAACATTTCCGGATTTTTTCGTGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCAAAATCTTTCTTTATCAAAACGTCGGCACATTTTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTT < SRR19973063.1003397/150‑1 (MQ=60)
GCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGAT < SRR19973063.628970/150‑1 (MQ=60)
CCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATT < SRR19973063.3854061/150‑1 (MQ=60)
AACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATG > SRR19973063.2097509/1‑150 (MQ=60)
ATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTA < SRR19973063.4710716/150‑1 (MQ=60)
TTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAG < SRR19973063.906292/150‑1 (MQ=60)
TCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCG > SRR19973063.3961779/1‑150 (MQ=60)
TCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCG < SRR19973063.3541031/150‑1 (MQ=60)
TCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCG < SRR19973063.3541009/150‑1 (MQ=60)
TCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCTTGTGAGTCATTTTGATTAATGGTAGCG > SRR19973063.3961788/1‑150 (MQ=60)
CGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTC < SRR19973063.1449890/150‑1 (MQ=60)
CGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTC < SRR19973063.866527/150‑1 (MQ=60)
CGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTC < SRR19973063.3658456/150‑1 (MQ=60)
CGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTC < SRR19973063.3877844/150‑1 (MQ=60)
ATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCT > SRR19973063.5148257/1‑150 (MQ=60)
TTATTTCGCGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTT < SRR19973063.614593/150‑1 (MQ=60)
ATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGT > SRR19973063.2931788/1‑150 (MQ=60)
TTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTA < SRR19973063.2781401/150‑1 (MQ=60)
TTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTGA > SRR19973063.1891431/1‑150 (MQ=60)
TTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCATGTGGGTCATTTTGAGTAATTGTAGCGTCGCGTGTCA > SRR19973063.1891360/1‑150 (MQ=60)
TCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAA < SRR19973063.2327523/150‑1 (MQ=60)
GAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATG < SRR19973063.1958284/150‑1 (MQ=60)
GAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCGTGTCAATT > SRR19973063.3283149/1‑150 (MQ=60)
AGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGT < SRR19973063.4837592/150‑1 (MQ=60)
CAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAA < SRR19973063.2239302/150‑1 (MQ=60)
AGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCATGTGAGTCATTTTGATTAATGGTAGCGTCGCGTGTAAAAGTAAG > SRR19973063.2706420/1‑150 (MQ=60)
CTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGCT < SRR19973063.1722947/150‑1 (MQ=60)
TGGCGCGGATTAGCCCGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGGCGCGTGTCAATGTTAGTTG > SRR19973063.1843389/1‑150 (MQ=60)
GGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGT < SRR19973063.4820997/150‑1 (MQ=60)
GGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGT < SRR19973063.1318062/150‑1 (MQ=60)
CGCGGATTAGCCAGGCAGCCTGAATGAACACCGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTG < SRR19973063.4963142/150‑1 (MQ=60)
CGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTG < SRR19973063.4962614/150‑1 (MQ=60)
CGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGAT < SRR19973063.2604766/150‑1 (MQ=60)
ATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGAACTTTTTTGTCATTTTGATTAATGGTAGCGTCGCTTGTGAAAGTAAGTTGTTGttaaa > SRR19973063.3105000/1‑145 (MQ=60)
TAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATA > SRR19973063.630613/1‑150 (MQ=60)
AGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAA < SRR19973063.1846587/150‑1 (MQ=60)
AGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAA < SRR19973063.1208371/150‑1 (MQ=60)
AGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAA < SRR19973063.3547335/150‑1 (MQ=60)
AGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTAATTTTGATTAATGGTCGCGTCGCTTGTCAATGTAAGTTTTTGATACcaaa > SRR19973063.3443841/1‑146 (MQ=60)
AGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATTGTAGCGTCGCGTGTCAATGTAAGTTGTTGATACAAAAAATT > SRR19973063.1167512/1‑150 (MQ=60)
GCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGTTAAATAATATTTA > SRR19973063.85838/1‑150 (MQ=60)
CAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTAT > SRR19973063.1715773/1‑150 (MQ=60)
CAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTAT > SRR19973063.3428002/1‑150 (MQ=60)
CTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTTTTGTTACATAAAATTTATATAT > SRR19973063.3031236/1‑150 (MQ=60)
CTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCTTGTGAGTCATTTTGATTAATTGTAGCGTCGCTTGTCAAAGTAAATTTTTTATACAAAATAATTATATAT > SRR19973063.4423039/1‑150 (MQ=60)
GAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGTGTCATTTTGATTAATGGTAGCGTCGCTTGTGAATGTAAGTTTTTTATAAATAATATTTATATATTATTAA > SRR19973063.181727/1‑150 (MQ=60)
GAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGTTACATAATATTTATATATGATTAA > SRR19973063.5093268/1‑150 (MQ=60)
AACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCATGTTAGTCATTTTTTTTAATGGTAGCGTCGCGTGTCAAagttagttttttttaaaaaaaatttttatatttttaaaaaa > SRR19973063.1764111/1‑109 (MQ=60)
AACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGACGGCACATTGTCGGCG‑TTTTTTTTCtgtacatttgagtaattttttttaattgtagagtacctttttaaatgaaattttttataaataaaaattataaattattaaaaaa > SRR19973063.1764143/1‑65 (MQ=60)
CGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACG < SRR19973063.1848062/150‑1 (MQ=60)
CGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACG < SRR19973063.3275762/150‑1 (MQ=60)
CGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACG < SRR19973063.1848046/150‑1 (MQ=60)
CGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACG < SRR19973063.1847990/150‑1 (MQ=60)
CGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTTTTGATACATAATATTTATATATTATTAATCAACG > SRR19973063.4724157/1‑150 (MQ=60)
GGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGG < SRR19973063.2946913/150‑1 (MQ=60)
AATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTTTTTATACATAAAATTTATATATTATTAATCAACCGATTA > SRR19973063.3331101/1‑150 (MQ=60)
TTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGGATGATT < SRR19973063.4411518/150‑1 (MQ=60)
TAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCGTGTAAAAGTAATTTGTTGATACAaaaaaattataaattattaataaaaggattatta > SRR19973063.5007249/1‑116 (MQ=60)
|
CACCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGGATGATTC > CP009273/955420‑955717
|
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |