Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F342 I0 R1
|
1331 |
225.9 |
7641038 |
95.8% |
7320114 |
147.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
955,568 |
A→T |
100% |
intergenic (+17/‑152) |
aroA → / → ycaL |
5‑enolpyruvylshikimate‑3‑phosphate synthetase/putative peptidase‑related chaperone |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 955,568 | 0 | A | T | 98.6%
| 691.7
/ ‑0.1
| 211 | intergenic (+17/‑152) | aroA/ycaL | 5‑enolpyruvylshikimate‑3‑phosphate synthetase/putative peptidase‑related chaperone |
| Reads supporting (aligned to +/- strand): ref base A (0/3); new base T (88/120); total (88/123) |
| Fisher's exact test for biased strand distribution p-value = 2.67e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 |
| Rejected as polymorphism: E-value score below prediction cutoff. |
| Rejected as polymorphism: Frequency below/above cutoff threshold. |
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
Only 100 of 216 total aligned reads displayed.
CGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGGATGA > CP009273/955423‑955714
|
gATGGCGATGTGTTTCTCGCTGGTGGCGTTGTAAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACACCGGGCaattaata > 2:3105298/1‑148 (MQ=255)
aTGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAg > 1:3005994/1‑148 (MQ=255)
aTGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAg > 1:1801165/1‑148 (MQ=255)
tGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGc > 2:450588/1‑148 (MQ=255)
ggCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGcc > 2:2513309/1‑148 (MQ=255)
cGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCaa < 1:3471653/148‑1 (MQ=255)
aTGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCCGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAt > 1:1297134/1‑148 (MQ=255)
aTGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAt > 1:1247373/1‑148 (MQ=255)
aTGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAt > 1:1369698/1‑148 (MQ=255)
tgtgTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtc > 2:1257143/1‑148 (MQ=255)
tgtgTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtc > 2:212440/1‑148 (MQ=255)
tgtgTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtc > 1:2307153/1‑148 (MQ=255)
tgtgTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtc < 1:1161618/148‑1 (MQ=255)
gtTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtcttt < 2:1556737/148‑1 (MQ=255)
gtTTCTCGCTGGTGGCGGTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtcttt < 2:2574664/148‑1 (MQ=255)
ttCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtctttct > 2:2172905/1‑148 (MQ=255)
ttCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtctttct < 1:2039512/148‑1 (MQ=255)
ctcGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATctttcttt < 2:1216561/148‑1 (MQ=255)
ctcGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATctttcttt < 2:806333/148‑1 (MQ=255)
tcGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTa > 2:1539231/1‑148 (MQ=255)
ggtggCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCaaa < 2:1039226/148‑1 (MQ=255)
gtggCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCaaaa < 2:3742143/148‑1 (MQ=255)
gtggCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCaaaa < 2:3332875/148‑1 (MQ=255)
gtggCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCaaaa < 1:3055498/148‑1 (MQ=255)
aGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACAt > 1:186661/1‑148 (MQ=255)
gATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACAtt > 2:547062/1‑148 (MQ=255)
aTACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTg > 1:1570035/1‑148 (MQ=255)
acacCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTc > 1:2883717/1‑148 (MQ=255)
acCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCgg > 2:666166/1‑148 (MQ=255)
cAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCg < 2:1588395/148‑1 (MQ=255)
cAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCg < 2:2307640/148‑1 (MQ=255)
cAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCg < 2:932076/148‑1 (MQ=255)
cAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCg < 2:273351/148‑1 (MQ=255)
cAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCg < 2:3220386/148‑1 (MQ=255)
gTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑tt < 1:3105018/148‑1 (MQ=255)
tGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑ttt > 1:2675575/1‑148 (MQ=255)
gACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑tttt > 2:51768/1‑148 (MQ=255)
aCGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑ttttt < 1:3698750/148‑1 (MQ=255)
aCGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑ttttt > 1:2103184/1‑148 (MQ=255)
gATTCTTGATCCCAAATGACCGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGATTGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑ttttttt < 2:2465313/148‑1 (MQ=255)
aTTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑tttttttt < 2:1640728/148‑1 (MQ=255)
ttCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCCGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑tttttttta > 2:3576225/1‑147 (MQ=255)
cTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGTGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCgg < 1:3358725/148‑1 (MQ=255)
tGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGAc < 2:3183760/148‑1 (MQ=255)
aTCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCt < 1:448681/148‑1 (MQ=255)
cccAAATGCACGGCCAAAACAGTTCCGGTTTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAACTCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTtg < 2:3699685/148‑1 (MQ=255)
ccAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTtgt < 1:1966883/148‑1 (MQ=255)
ccAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTtgt < 1:1714411/148‑1 (MQ=255)
cAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTtgtg > 2:1263188/1‑148 (MQ=255)
aaaTGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGa < 2:2334555/148‑1 (MQ=255)
aaaTGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGa > 1:584218/1‑148 (MQ=255)
cGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑ttt > 2:144157/1‑148 (MQ=255)
gCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCATGTGTGTGA‑TTTTg > 1:1062992/1‑148 (MQ=255)
gCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTATGACCGTGTTAGTCA‑ttttt > 1:1453371/1‑147 (MQ=255)
ccAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGa < 1:1257152/148‑1 (MQ=255)
cAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGAt < 2:575931/148‑1 (MQ=255)
aaaaCATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGAtt < 2:470968/148‑1 (MQ=255)
aaaCATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACTTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCATGTGTGTCA‑TTTttatta > 2:2297524/1‑148 (MQ=255)
aaCATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCTTGTGTGTCA‑TTTTGTTTaa > 1:1809069/1‑148 (MQ=255)
aaCATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTaa < 1:1539231/148‑1 (MQ=255)
aCATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAAt < 2:1171880/148‑1 (MQ=255)
aCATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAAt < 2:1172165/148‑1 (MQ=255)
cATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATg < 2:3446568/148‑1 (MQ=255)
aTTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATgg > 2:2406728/1‑148 (MQ=255)
ttCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTTGGACCATGTGTGTGA‑TTTTGTTTAATTGtt > 1:398486/1‑147 (MQ=255)
tattTCGAGCAGCTGGCGCGGATTAGCCCGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TGTTTTTTTGGTCCGTGTGGGTGC‑TTTTGATTTTTGGTAGCGtgggg > 1:1091131/1‑144 (MQ=255)
tattTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATTGTAGCGTCGCt > 2:2750536/1‑148 (MQ=255)
tattTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCTTGTGAGTCA‑TTTTTATTAATGGTAGCGTCGCt > 2:1746618/1‑148 (MQ=255)
ttCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTTAATGAACAACGGGCAATTAATAGCCAAATATTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGt < 1:167519/148‑1 (MQ=255)
tCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATACCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGt < 1:3608497/148‑1 (MQ=255)
cagcTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGt < 2:1490243/148‑1 (MQ=255)
cagcTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGt < 2:3391999/148‑1 (MQ=255)
agcTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTa < 2:2074029/148‑1 (MQ=255)
gcTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTaa > 2:2354527/1‑148 (MQ=255)
gcTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCGTGTCaagggaa > 1:3488188/1‑143 (MQ=255)
gcTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCATGTGGGTCA‑TTTTGTTTAATGGGTGGGGCGCGTGTGAATGtta > 1:2360570/1‑146 (MQ=255)
cTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAg < 2:38669/148‑1 (MQ=255)
gcgcGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAgttg < 2:2228947/148‑1 (MQ=255)
cgcgGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAgttg < 1:519728/148‑1 (MQ=255)
aTTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATa < 1:3579556/148‑1 (MQ=255)
aTTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGNCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATa < 1:1933784/148‑1 (MQ=255)
ttAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCATTTGAGTCA‑TTTTGATTAATGGTATCGTCGCGTGTGAAAGTAActtttttaaaa > 2:388196/1‑143 (MQ=255)
tAGCCAGTCAGCCAGAATGAACAACGGTCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTTTCGGGG‑TTTTTTTTCGTACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACa < 2:3685806/148‑1 (MQ=255)
tAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCGTGTGAGTCA‑TTTTTATTAATGGTAGCGTCGCTTGTGAAAGTAAGtttttgtttaa > 1:943526/1‑143 (MQ=255)
cAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACataat < 2:1517271/148‑1 (MQ=255)
aGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATTGAATTTGTTGATACataata > 2:3797247/1‑148 (MQ=255)
aGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACataata < 2:726523/148‑1 (MQ=255)
aGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTGTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACataata < 1:2520975/148‑1 (MQ=255)
gaatgaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCATGTGAGTCA‑TTTTTATTAATTGTAGCGTCGCGTGTGAATTTTAGTTTTTGATAAAAAAAATTTttatat > 1:319612/1‑148 (MQ=255)
aatgaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCTTTTGTGTGA‑TTTTTATTAATTGTATCGTCGCTTGTGAAAGTAAGTTTTTTTTAAATAATATTTatatatt > 1:2503393/1‑147 (MQ=255)
aatgaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTTAATGTAAGTTGTTGATACATAATATTTATATATg < 1:2844889/148‑1 (MQ=255)
aatgaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCGTTTGAGTAA‑TTTTGTTTAATTGTAGCGTCGGTTTGGAATGGAAGTTTTTGATAAAAAAAAATTATATATg > 2:1710166/1‑148 (MQ=255)
atgaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGTGTCA‑TTTTTATTAATGGTAGCGTCGCGTGTGCATGTAATTTTTTGTTAAATAATATTTttatatta > 2:79122/1‑146 (MQ=255)
atgaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGa < 1:666166/148‑1 (MQ=255)
tgaaCAACGGGCTTTTAATAGACATATCTTTCTTTATAAAAACGTCGGCATTTTGTCGTCT‑TTTTTTTTCGGAACTTGTTTTTCA‑TTTTTATTTATGGTAGCTTAGCTTGTAATTGTAAGTTGTTGATACATAATATTTATATTTGAt < 2:1930075/148‑1 (MQ=255)
tgaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGAt < 1:1473435/148‑1 (MQ=255)
aacaacGGGCAATTAATAGCCAAATCTTTCTTTATCAACACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTa < 1:478645/148‑1 (MQ=255)
aacaacGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTTATTAATGGTAGCGTCGCTTTTGAAAGTAAGTTGTTTATACATAATATTTATATATGATTa > 2:731345/1‑148 (MQ=255)
acGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCTTGTGTGTCA‑TTTTGATTAATTGTAGCGTCGCGTGTGAAATTAAGTTTTTTTTAAATAATATTTTTTTAttatttataa > 1:2192094/1‑146 (MQ=255)
taaataGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTTTGTTTCA‑TTTTGATTAATGGTAGCGTCGCTTTTAAATGTAAGCTGTTGATACATAAAATTTATTTATGTTTAATCAACGgatga > 2:929957/1‑148 (MQ=255)
|
CGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGGATGA > CP009273/955423‑955714
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGGATGATT > CP009273/955422‑955716
|
CCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAAT < SRR19973069.3818863/150‑1 (MQ=60)
CCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAAT < SRR19973069.3818773/150‑1 (MQ=60)
CCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAAT < SRR19973069.841459/150‑1 (MQ=60)
CCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAAT < SRR19973069.840317/150‑1 (MQ=60)
CCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAAT < SRR19973069.841446/150‑1 (MQ=60)
CGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATA < SRR19973069.3032406/150‑1 (MQ=60)
GGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAG > SRR19973069.3499172/1‑150 (MQ=60)
GGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAG > SRR19973069.1813845/1‑150 (MQ=60)
GGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAG > SRR19973069.3025939/1‑150 (MQ=60)
TGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCCGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAT > SRR19973069.1305878/1‑150 (MQ=60)
CGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAT > SRR19973069.1255832/1‑150 (MQ=60)
CGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAT < SRR19973069.3582858/150‑1 (MQ=60)
CGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAT < SRR19973069.3660783/150‑1 (MQ=60)
CGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAT > SRR19973069.1379228/1‑150 (MQ=60)
CGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAT < SRR19973069.3494104/150‑1 (MQ=60)
GATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATC > SRR19973069.2318521/1‑150 (MQ=60)
GATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATC > SRR19973069.1281792/1‑150 (MQ=60)
GATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATC > SRR19973069.2322854/1‑150 (MQ=60)
ATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCT > SRR19973069.3616401/1‑150 (MQ=60)
ATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCT < SRR19973069.2017165/150‑1 (MQ=60)
TGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTT < SRR19973069.1169695/150‑1 (MQ=60)
TGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCCAATCTTTC > SRR19973069.2643704/1‑150 (MQ=60)
TTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTT < SRR19973069.2053676/150‑1 (MQ=60)
CTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTAT < SRR19973069.1468123/150‑1 (MQ=60)
CTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTAT < SRR19973069.770104/150‑1 (MQ=60)
GTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACG < SRR19973069.3075714/150‑1 (MQ=60)
GCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCG < SRR19973069.512979/150‑1 (MQ=60)
CGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGG > SRR19973069.3749151/1‑150 (MQ=60)
CGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGG > SRR19973069.1105855/1‑150 (MQ=60)
TCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACAT > SRR19973069.188198/1‑150 (MQ=60)
AGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTG > SRR19973069.1580721/1‑150 (MQ=60)
ATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTC > SRR19973069.2902689/1‑150 (MQ=60)
AGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTT > SRR19973069.2693509/1‑150 (MQ=60)
AGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTT > SRR19973069.3126149/1‑150 (MQ=60)
AGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTT > SRR19973069.2693429/1‑150 (MQ=60)
AGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTT < SRR19973069.440570/150‑1 (MQ=60)
GTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTT < SRR19973069.3125450/150‑1 (MQ=60)
GTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTT < SRR19973069.1253628/150‑1 (MQ=60)
TGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTT > SRR19973069.2117703/1‑150 (MQ=60)
TGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTT < SRR19973069.3351589/150‑1 (MQ=60)
TGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTT < SRR19973069.1438011/150‑1 (MQ=60)
ACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTT < SRR19973069.3722924/150‑1 (MQ=60)
TTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGG > SRR19973069.2873243/1‑150 (MQ=60)
TTCTTGATCCCAAATGCACGGCCAAAACATGTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGG < SRR19973069.1510861/150‑1 (MQ=60)
CTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGTGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGAC < SRR19973069.3380704/150‑1 (MQ=60)
TGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCT > SRR19973069.1917349/1‑150 (MQ=60)
ATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTG < SRR19973069.451960/150‑1 (MQ=60)
CCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTG < SRR19973069.1393563/150‑1 (MQ=60)
CCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGA < SRR19973069.1726420/150‑1 (MQ=60)
CCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGA > SRR19973069.276654/1‑150 (MQ=60)
CCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGA < SRR19973069.1980535/150‑1 (MQ=60)
CCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCATGTGA > SRR19973069.588218/1‑150 (MQ=60)
AAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTatgtacatgtttgt > SRR19973069.1630017/1‑136 (MQ=60)
CGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCATGTGTGTGA‑TTTTG > SRR19973069.1070398/1‑150 (MQ=60)
CGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTG < SRR19973069.1970593/150‑1 (MQ=60)
CGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTATGACCGTGTTAGTCA‑TTTTT > SRR19973069.1463515/1‑150 (MQ=60)
GGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCGTGTGTGTGA‑TTTTGT > SRR19973069.2104783/1‑150 (MQ=60)
GCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGAT < SRR19973069.3818240/150‑1 (MQ=60)
CCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATT < SRR19973069.1265632/150‑1 (MQ=60)
CCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATT < SRR19973069.1265641/150‑1 (MQ=60)
CAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGTGTCA‑TTTTGATTA > SRR19973069.589639/1‑150 (MQ=60)
AAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCTTGTGTGTCA‑TTTTGTTTAA > SRR19973069.1821787/1‑150 (MQ=60)
AAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAAT < SRR19973069.2343090/150‑1 (MQ=60)
AACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATG < SRR19973069.1549780/150‑1 (MQ=60)
AACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATG < SRR19973069.3119600/150‑1 (MQ=60)
ATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTTGGACCATGTGTGTGA‑TTTTGTTTAATtgtt > SRR19973069.401398/1‑146 (MQ=60)
ATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTA < SRR19973069.2530045/150‑1 (MQ=60)
ATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCTTGTGTGTCA‑TTTTtttttattgta > SRR19973069.2848243/1‑139 (MQ=60)
TTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAG < SRR19973069.175964/150‑1 (MQ=60)
TTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAG < SRR19973069.176765/150‑1 (MQ=60)
ATTATTTCGAGCAGCTGGCGCGGATTAGCCCGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TGTTTTTTtggtccgtgtgggtgcttttgatttttggtagcgtgggg > SRR19973069.1098750/1‑111 (MQ=60)
ATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTtgggccatgtgtggggttttttttttatgtatggtcgcg > SRR19973069.1098620/1‑111 (MQ=60)
ATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCTTGTGAGTCA‑TTTTtttttattgtagcgtcgcg > SRR19973069.1569938/1‑131 (MQ=60)
ATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCT < SRR19973069.1093456/150‑1 (MQ=60)
TTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTT < SRR19973069.1626512/150‑1 (MQ=60)
TTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTTAATGAACAACGGGCAATTAATAGCCAAATATTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCA < SRR19973069.168955/150‑1 (MQ=60)
TTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCA < SRR19973069.168957/150‑1 (MQ=60)
TCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATACCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCA < SRR19973069.3632058/150‑1 (MQ=60)
CAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTaggtacttttgatttattttgattaattttaccgaggcttgggtaagtaa > SRR19973069.3665474/1‑100 (MQ=60)
CAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCGTGTCAAgggaa > SRR19973069.3510691/1‑145 (MQ=60)
CAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCTTGTGAGTGA‑GTTTGGTTAATGGTAGCGgcgcgggtgcaaggta > SRR19973069.3064756/1‑134 (MQ=60)
CAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCATGTGGGTCA‑TTTTGTTTAATGGgtggggcgcgtgtgaatgtta > SRR19973069.2376611/1‑129 (MQ=60)
CTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTT < SRR19973069.2070354/150‑1 (MQ=60)
GCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTT < SRR19973069.1820036/150‑1 (MQ=60)
CGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTGA‑TTTTttttaattgttgcgtcgcgtgtgaaattaattttttt > SRR19973069.224681/1‑113 (MQ=60)
CGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTT < SRR19973069.523419/150‑1 (MQ=60)
CGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTG < SRR19973069.787430/150‑1 (MQ=60)
CGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTTGGACCTTtggttggattttgttttattgtagcgtggcttttgaaatttattttttt > SRR19973069.3638273/1‑101 (MQ=60)
GATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTaggaacattttattaaattttattaaatgtagagtcgcatttaaaattaaattttttataa > SRR19973069.868088/1‑89 (MQ=60)
ATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTggggccgtgtggggccgtttggtttatgggtgcgtggcgggggcctggtagttttttttaaa > SRR19973069.464524/1‑88 (MQ=60)
ATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACA < SRR19973069.214114/150‑1 (MQ=60)
ATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACA < SRR19973069.3602894/150‑1 (MQ=60)
ATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCTTTTGAGTGA‑GTTTGTTTAATGGTATCGTCGCgtgtgaattttaggtttttttaca > SRR19973069.936099/1‑126 (MQ=60)
ATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCGTGTGAGTCA‑TTTTTATTAATGGTAGCGTCGCTTGTGAAAGTAAGTTtttgtttaa > SRR19973069.949888/1‑141 (MQ=60)
ATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGNCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACA < SRR19973069.1947059/150‑1 (MQ=60)
AGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTGA‑TTTTGTTTAATGGTAGCGTCGCTTttcaaaggtatttttttattaaaaa > SRR19973069.3164212/1‑125 (MQ=60)
CAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATAT < SRR19973069.1331049/150‑1 (MQ=60)
CAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCTTTTGAGTAA‑TTTTTATTAATGGTAGCGTCGCgtttgaatttaagttttttttaaaaaaaaa > SRR19973069.1236277/1‑120 (MQ=60)
AGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTgggtccatgtgtgtcattttttttaattgtatggtggggtggggaatttattttttgtttaaaaatatt > SRR19973069.3682435/1‑81 (MQ=60)
AGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTGTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATT < SRR19973069.2537737/150‑1 (MQ=60)
CAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTATTGATACATAATATTTAT < SRR19973069.453882/150‑1 (MQ=60)
CAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCTTTTGTGTCA‑TTTTGTTTAATTGTAGCGTCGCTTttgaatttaaattttttttaaaaaaaattttt > SRR19973069.2336892/1‑118 (MQ=60)
AGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TGTTTTTTGGGTCCTTGTGtgggatttttttttatggtgggggcgggggttgaagtgatgtggtgtttaaaaaaaattttt > SRR19973069.3279914/1‑88 (MQ=60)
GCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATAT < SRR19973069.2977995/150‑1 (MQ=60)
CTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTtggtccgtttttgtaattttttttaattttttggtggggttttgatgttagtttttgtttaaaaaaattttttttt > SRR19973069.2645751/1‑74 (MQ=60)
CTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCTTGTGTGTCA‑TTTTTATTAATTGTAGCGgggcgtttgcaatttacttttttttaaaaaatatttatattt > SRR19973069.1218218/1‑108 (MQ=60)
CTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCATGTGAGTCA‑TTTTTATTAATTGTAGCGTCGCgtgtgaattttagtttttgataaaaaaaatttttatat > SRR19973069.321711/1‑112 (MQ=60)
CTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TGTTTTTTtgggccatgtgtgtgattttttttaattgtagggtggcgtttttattttaatttttttttcaaaaaaattttatat > SRR19973069.718641/1‑74 (MQ=60)
CTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TGTTTTTTggggccgtgtgtgtgattttttttaattgttggggggggtttgtaagtaagtttttttttaaaaaaatttttttaa > SRR19973069.2975603/1‑74 (MQ=60)
TGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCTTTTGTGTGA‑TTTTTATTAATTGTATCGTCGCTTGTGAAAGTAAGTTTTTTTTAAATAATATTTATATATT > SRR19973069.2520102/1‑150 (MQ=60)
TGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATG < SRR19973069.3353356/150‑1 (MQ=60)
GAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTgggtccatggttttcattttgtttaattgtctggtggggggtgaatgttagtttttttttaataaaaattatataatt > SRR19973069.1100762/1‑72 (MQ=60)
GAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGGCCATGTGAGTAA‑ATTTGATTAATtgtatgggcgcgtgtcaaagtaagttgttgtttaataaaaattttatatta > SRR19973069.3462174/1‑99 (MQ=60)
GAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TGTTTTTTGGGACCTTGTGAGTGA‑TTTTttttaattgtatcgtcgcgtgtgaaatgtaatttttttttaaaaaaatttttatatta > SRR19973069.2048304/1‑92 (MQ=60)
AATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTTAATGTAAGTTGTTGATACATAATATTTATATATGAT < SRR19973069.2863643/150‑1 (MQ=60)
ATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGTCCTTGTGtgtgattttttttaattgtatcgtcgcgtgtgcaagttagtttttttttaaaaaaatttttatattatt > SRR19973069.1206963/1‑81 (MQ=60)
ATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATT < SRR19973069.670703/150‑1 (MQ=60)
ATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATT < SRR19973069.2433019/150‑1 (MQ=60)
ATGAACAACGGGCAATCAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCTTGTGAGTGA‑TTTTGTTTAATTGTAGCGTagcgtgtgaatttaagttttttttaaaaaaaatttttttattttt > SRR19973069.3147182/1‑105 (MQ=60)
TGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTA < SRR19973069.1483698/150‑1 (MQ=60)
AACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAACACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAAT < SRR19973069.482121/150‑1 (MQ=60)
CAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTtggtccatgggtgtgattttgttttattgtttcggcgcgtttgaattttaatttttttttcaaaaaatttatttttgttttataa > SRR19973069.253826/1‑65 (MQ=60)
CAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTatgtacatgttggtgatttttttttatggtttcgtcgcgtgtggattttagtttttgtttaaaaaaaattatatattattaataa > SRR19973069.1847177/1‑65 (MQ=60)
CAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTagggcctagttggtcattttgtttttttttagcggcgcggttggtatgtagttttttttaaagaaaaattttatatatatgagag > SRR19973069.3076798/1‑65 (MQ=60)
CAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTaggaacatgttagtgattttttttaattttatggtcgcgtgtgaaatttatttttttttaaattaaatttttttattttttttta > SRR19973069.2096968/1‑65 (MQ=60)
CAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGGGACCTTGTGTGTCA‑TTTTGATTAATTGTAGCGTCGCgtgtgaaattaagttttttttaaataatatttttttattatttataa > SRR19973069.2207007/1‑103 (MQ=60)
CAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCgtgtgggtgattttttttaatggtgtcggggcgggtggaagttagttgttttttaaaaaaatttatataatttttttaa > SRR19973069.154745/1‑71 (MQ=60)
CAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATGGTCGGCG‑TGTTTTTTttgaccatggtctgtatttttttttaaggtagcgtagcgggttatagaaaattgtttttaaataaatttttttttatttttataa > SRR19973069.3076275/1‑65 (MQ=60)
GGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTttgaccattttagtgatttttttttaatgtagcgtggcgttttgattttattttttttttaaaaaaaattattttttttttaaaaaacg > SRR19973069.3277018/1‑61 (MQ=60)
CAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTaggtccatgttagtcaatttttttaattttagcgtcgcgtttgaaattaaattttttttaaaaaaaaattattaattattaataaaacgaat > SRR19973069.932627/1‑58 (MQ=60)
CAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTaggtacatttgagtgattttttttaaaggtagcgtggcttgtgaaatttagatttttttaaaaaaaaattatatatttataaaaaaaggatt > SRR19973069.932705/1‑58 (MQ=60)
CAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTGTGACCATGTGAGTGA‑TTTTGttttattgttgggtcgggtgtgtatgttatttttttttaaaaaaaaaatatatattttttaaaaaaggaag > SRR19973069.438587/1‑79 (MQ=60)
CAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGGATG < SRR19973069.529519/150‑1 (MQ=60)
TAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTtggagcatttttttaattttttttaattgtagggtggggttttacagttatttttttttaaaaaaaaattttaatttttttataaaaagaataatt > SRR19973069.2710077/1‑54 (MQ=60)
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CCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCA‑TTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGGATGATT > CP009273/955422‑955716
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
