Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F218 I0 R1
|
1506 |
278.7 |
9275112 |
94.5% |
8764980 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
1,284,124 |
C→A |
22.0% |
intergenic (‑44/+6) |
purU ← / ← ychJ |
formyltetrahydrofolate hydrolase/UPF0225 family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 1,284,124 | 0 | C | A | 22.0%
| 678.2
/ 142.5
| 254 | intergenic (‑44/+6) | purU/ychJ | formyltetrahydrofolate hydrolase/UPF0225 family protein |
| Reads supporting (aligned to +/- strand): ref base C (100/98); new base A (21/35); total (121/133) |
| Fisher's exact test for biased strand distribution p-value = 9.66e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.00e-01 |
Only 100 of 260 total aligned reads displayed.
GTACGATATTTAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAATTATTGCACCTG > CP009273/1283975‑1284272
|
gTACGATATTTAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTc > 1:3881700/1‑150 (MQ=255)
gTACGATATTTAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTc > 1:358717/1‑150 (MQ=255)
gTACGATATTTAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTc < 1:1276393/150‑1 (MQ=255)
gATATTTAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAAcc > 1:3170556/1‑150 (MQ=255)
ttAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCattat < 2:330415/150‑1 (MQ=255)
tAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCattatt < 1:2367820/150‑1 (MQ=255)
aaCTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTg < 1:405843/150‑1 (MQ=255)
tCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGcc < 1:2183185/150‑1 (MQ=255)
cGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCg < 2:1042272/150‑1 (MQ=255)
ttGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCgcagca < 1:1759568/150‑1 (MQ=255)
aGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACttt < 1:3415417/150‑1 (MQ=255)
cAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACttttt < 1:3669692/150‑1 (MQ=255)
aaaTATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTa > 2:1710201/1‑150 (MQ=255)
aaTATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTaa > 2:3133631/1‑150 (MQ=255)
aaTATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTaa < 2:4267886/150‑1 (MQ=255)
aaTATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTaa > 1:385651/1‑150 (MQ=255)
aaTATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTaa > 1:4350177/1‑150 (MQ=255)
atatTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTaaa > 2:135956/1‑150 (MQ=255)
tatTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAAt < 2:4034106/150‑1 (MQ=255)
tatTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAAt > 1:4303375/1‑150 (MQ=255)
atTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAAtt > 1:2017505/1‑150 (MQ=255)
atTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAAtt > 2:3042457/1‑150 (MQ=255)
atTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAAtt > 2:2105759/1‑150 (MQ=255)
tGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAAtttt < 1:541518/150‑1 (MQ=255)
tAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTa > 2:2041889/1‑150 (MQ=255)
aTACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTAcc < 1:1023854/150‑1 (MQ=255)
tACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCt > 2:2242006/1‑150 (MQ=255)
cGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGa < 1:4600340/150‑1 (MQ=255)
cGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGa > 1:1604678/1‑150 (MQ=255)
tGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAAc < 2:3245577/150‑1 (MQ=255)
gATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACcac > 1:2756298/1‑150 (MQ=255)
gATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACcac < 1:2537962/150‑1 (MQ=255)
gATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACcac > 1:3579923/1‑150 (MQ=255)
tCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACaa < 2:2898759/150‑1 (MQ=255)
aCCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGc < 2:3000089/150‑1 (MQ=255)
ccTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCa > 1:1477515/1‑150 (MQ=255)
ccTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCa < 1:3549991/150‑1 (MQ=255)
ccTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCa > 1:1146676/1‑150 (MQ=255)
tttGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGa < 2:2809689/150‑1 (MQ=255)
tGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATc > 1:2922057/1‑150 (MQ=255)
gTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGt > 2:2032900/1‑150 (MQ=255)
gTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGt > 2:3147221/1‑150 (MQ=255)
tCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGtt > 2:4505039/1‑150 (MQ=255)
ccGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTg < 2:2512090/150‑1 (MQ=255)
cGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGc < 2:7662/150‑1 (MQ=255)
ggACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCg > 2:62128/1‑150 (MQ=255)
ggACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCg < 2:3234186/150‑1 (MQ=255)
cAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGAcc > 2:2207982/1‑150 (MQ=255)
tAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAAc > 2:1287395/1‑150 (MQ=255)
tAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAAc > 2:3438133/1‑150 (MQ=255)
gCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGa > 2:3795966/1‑150 (MQ=255)
cAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGAc > 1:3965909/1‑150 (MQ=255)
gAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACgt < 1:3051353/150‑1 (MQ=255)
aCTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACgtgt < 2:2255077/150‑1 (MQ=255)
cTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTa < 2:82455/150‑1 (MQ=255)
tttACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCCTTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCTGACGTGTAc > 2:1617541/1‑150 (MQ=255)
tttACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTAc > 1:319447/1‑150 (MQ=255)
aCGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGt < 1:1184033/150‑1 (MQ=255)
gTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCa > 1:3550187/1‑150 (MQ=255)
gTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCa > 1:1816722/1‑150 (MQ=255)
gTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCa > 1:3632515/1‑150 (MQ=255)
tGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAat > 2:1978205/1‑150 (MQ=255)
ggAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAata < 1:788591/150‑1 (MQ=255)
gAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAatat < 1:1875736/150‑1 (MQ=255)
gTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAg > 2:2943385/1‑150 (MQ=255)
tGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGt > 1:1545604/1‑150 (MQ=255)
tGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGt < 2:4185588/150‑1 (MQ=255)
cATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCAtt < 2:4571659/150‑1 (MQ=255)
cATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCAtt > 1:2575169/1‑150 (MQ=255)
aTTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTg < 2:855074/150‑1 (MQ=255)
aTTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGACGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTg < 2:4567961/150‑1 (MQ=255)
gCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGAcc > 2:434222/1‑150 (MQ=255)
cTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCg < 1:1279197/150‑1 (MQ=255)
cTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCg < 2:3072971/150‑1 (MQ=255)
tGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGt > 1:1073928/1‑150 (MQ=255)
ggAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGtt < 2:2717716/150‑1 (MQ=255)
gAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGttt > 2:2624862/1‑150 (MQ=255)
gAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGttt < 2:3534534/150‑1 (MQ=255)
aaaaaCCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGtttt < 1:4516075/150‑1 (MQ=255)
aaaCCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTtttct < 2:2464035/150‑1 (MQ=255)
aaaCCTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCGATATAGTACCATTGACCGTtttct > 1:2381880/1‑150 (MQ=255)
aaCCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTtttctt > 2:1135920/1‑150 (MQ=255)
cTTGTTGAGAGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCa < 1:4564929/150‑1 (MQ=255)
tgAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAAt > 1:3972561/1‑150 (MQ=255)
gagaGTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCAATTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATc < 2:2299483/150‑1 (MQ=255)
agagTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATcg > 1:1718057/1‑150 (MQ=255)
agagTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATcg < 1:414026/150‑1 (MQ=255)
agagTGTTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATcg < 2:1106167/150‑1 (MQ=255)
agTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATcgcg > 1:894678/1‑150 (MQ=255)
gtTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAAc < 1:958281/150‑1 (MQ=255)
gtTTGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAAc < 1:2423032/150‑1 (MQ=255)
tttGCTAAACCGTACCGTAAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACg < 2:2632578/150‑1 (MQ=255)
aaCCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAatt < 1:410663/150‑1 (MQ=255)
accgtaccgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAatta < 2:4533084/150‑1 (MQ=255)
accgtaccgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCAATGACCGTTTTCTTTCAAAAATCGCGAACGATCAatta > 1:3828779/1‑150 (MQ=255)
cgtaccgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAattatt < 1:4512922/150‑1 (MQ=255)
gtaccgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAATTATTg > 2:1716370/1‑150 (MQ=255)
gtaccgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAATTATTg > 1:1581246/1‑150 (MQ=255)
cgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAATTATTGCAcc < 2:2382816/150‑1 (MQ=255)
cgtCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAATTATTGCAcc < 1:1271580/150‑1 (MQ=255)
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GTACGATATTTAACTCGTGCTTGTAGCAAATATTGGTAATACGTGCGATCAGACCTTTTTGGTCCGGACAAATAGTACGCAGAACTTTACGTTGGAGTGAATGCATTGCTGGAAAAACCTTGTTGAGAGTGTTTGCTAAACCGTACCGTCAACCATTATTGGCCGCAGCACTTTTTAAATTTTTTACCTGAACCACAAGGGCAGGGATCGTTGCGACCAAACTGCGGACGTGTACCGTCAATATAGTACCATTGACCGTTTTCTTTCAAAAATCGCGAACGTTCAATTATTGCACCTG > CP009273/1283975‑1284272
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
