Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
26 |
102.0 |
3326124 |
78.0% |
2594376 |
98.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP002094 |
306,367 |
C→A |
M75I (ATG→ATT) |
LLNZ_01670 ← |
Nisin biosynthesis two‑component system, sensor histidine kinase NisK |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP002094 | 306,367 | 0 | C | A | 98.9%
| 360.1
/ NA
| 89 | M75I (ATG→ATT) | LLNZ_01670 | Nisin biosynthesis two‑component system, sensor histidine kinase NisK |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (35/53); minor base G (1/0); total (36/53) |
| Fisher's exact test for biased strand distribution p-value = 4.04e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TGTAATATTATGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAACATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTCT > CP002094/306271‑306457
|
tGTAATATTATGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAat > 2:154010/1‑99 (MQ=255)
tAATATTATGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAataa < 2:1136788/99‑1 (MQ=255)
aaTTTTATGTGAAGACTTTTTTAAAGCTAAAAAACTGGTTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAaataat < 1:770500/99‑1 (MQ=255)
aaTATTATGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAaataat > 2:779735/1‑99 (MQ=255)
tattatGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAataatat < 2:1389965/99‑1 (MQ=255)
tattatGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAataatat > 1:457497/1‑99 (MQ=255)
tattatGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAataatat > 2:1252983/1‑99 (MQ=255)
attatGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAataatata > 2:247239/1‑99 (MQ=255)
attatGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAataatata < 2:439008/99‑1 (MQ=255)
ttatGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAataatataa > 2:1070999/1‑99 (MQ=255)
ttatGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAataatataa < 2:1310055/99‑1 (MQ=255)
tatGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAataatataat > 1:1314216/1‑99 (MQ=255)
tgtgAAGACTGTTTTGAAGCTACAAAACTAGGTACATCTGACTTGACATAATGTCCTCCCAACATTTTACTTGTATCATGGGCAAAGATAATATAATCa > 2:1509298/1‑99 (MQ=255)
tgAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCata < 2:526753/99‑1 (MQ=255)
tgAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCata < 1:899885/99‑1 (MQ=255)
tgAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCata < 2:214053/99‑1 (MQ=255)
aaGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATg > 1:851358/1‑99 (MQ=255)
aaGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATg < 2:669213/99‑1 (MQ=255)
gACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATggg < 2:1346346/99‑1 (MQ=255)
cTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTa > 2:1420072/1‑99 (MQ=255)
cTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTa > 1:898150/1‑99 (MQ=255)
cTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTa > 1:611725/1‑99 (MQ=255)
ttttGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAgtg > 1:613382/1‑99 (MQ=255)
tGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGttt < 1:1149005/99‑1 (MQ=255)
gAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTc < 1:886870/99‑1 (MQ=255)
aaGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCa > 2:298542/1‑99 (MQ=255)
gCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCata > 2:994651/1‑99 (MQ=255)
gCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCata < 1:330655/99‑1 (MQ=255)
cTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCatat > 2:389011/1‑99 (MQ=255)
tACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATggg < 1:1090612/85‑1 (MQ=255)
tACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATggg > 2:1090612/1‑85 (MQ=255)
tACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATc < 1:1588594/99‑1 (MQ=255)
cAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCAc > 1:678536/1‑99 (MQ=255)
aaaCTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGt < 2:551327/99‑1 (MQ=255)
aaaCTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGt < 1:1462642/99‑1 (MQ=255)
aCTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTc < 2:1298545/99‑1 (MQ=255)
cTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCg > 1:821650/1‑99 (MQ=255)
gTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAat < 1:419183/58‑1 (MQ=255)
gTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGatat < 2:1514754/99‑1 (MQ=255)
gTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGatat > 1:1226063/1‑99 (MQ=255)
aTCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGa < 2:508015/99‑1 (MQ=255)
tCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGaa > 2:694138/1‑99 (MQ=255)
tCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGaa < 2:813709/99‑1 (MQ=255)
aCTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAg < 1:1582175/99‑1 (MQ=255)
aCTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAg > 1:307844/1‑99 (MQ=255)
cTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGt > 1:962053/1‑99 (MQ=255)
cTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGt < 1:197176/99‑1 (MQ=255)
cTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGt < 1:1635390/99‑1 (MQ=255)
ttGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGtt < 2:169780/99‑1 (MQ=255)
tGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTa < 2:515204/99‑1 (MQ=255)
aCATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTtaa > 1:224119/1‑99 (MQ=255)
aCATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTaaa > 1:1218011/1‑99 (MQ=255)
cATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAAt > 2:842301/1‑99 (MQ=255)
cATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAAt > 1:188964/1‑99 (MQ=255)
cATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAAt > 2:937825/1‑99 (MQ=255)
tAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCACATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTa > 1:559865/1‑99 (MQ=255)
aaTGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTAt < 1:63217/99‑1 (MQ=255)
aaTGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTAt < 2:1023909/99‑1 (MQ=255)
aaTGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTAt < 2:1637285/99‑1 (MQ=255)
aTGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATc < 1:878837/99‑1 (MQ=255)
aTGTCCTCCCAAAATTTTACTTGCATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTAta > 2:1316668/1‑98 (MQ=255)
tGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCt > 1:958536/1‑99 (MQ=255)
cctccCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGaa < 2:783602/99‑1 (MQ=255)
cctccCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGaa < 1:1428106/99‑1 (MQ=255)
ctccCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAAt < 2:1298435/99‑1 (MQ=255)
tccCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATc > 2:394970/1‑99 (MQ=255)
ccAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTa < 1:1058634/99‑1 (MQ=255)
aaaaTTTTACTTGTATCATTGTCAAAAATAATATAATGATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTaaa < 1:199050/99‑1 (MQ=255)
aaaaTTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTaaa < 2:1353907/99‑1 (MQ=255)
aaTTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAgc > 1:226354/1‑98 (MQ=255)
aaTTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGa < 1:1398585/99‑1 (MQ=255)
ttttACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATa < 1:1070999/99‑1 (MQ=255)
tttACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATaa < 2:492798/99‑1 (MQ=255)
ttACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATaaa < 1:732068/99‑1 (MQ=255)
ttACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATaaa > 2:1346529/1‑99 (MQ=255)
ttACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATaaa < 1:1152735/99‑1 (MQ=255)
aCTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACg < 2:390437/99‑1 (MQ=255)
ttGTATCATTGTCAAAAATAATATTATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGaa < 1:700044/99‑1 (MQ=255)
tGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAAt < 2:947977/99‑1 (MQ=255)
gTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTGCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATa > 1:704964/1‑99 (MQ=255)
tATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAg > 2:472645/1‑99 (MQ=255)
aTCATTGTCAAAAATAATTTAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGt < 2:203273/99‑1 (MQ=255)
aTCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGt < 2:1557505/99‑1 (MQ=255)
aTCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGt > 2:770973/1‑99 (MQ=255)
aTCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGt < 1:1167979/99‑1 (MQ=255)
tCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGtt < 2:188964/99‑1 (MQ=255)
tCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGtt < 1:1659756/99‑1 (MQ=255)
tCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGtt < 2:851358/99‑1 (MQ=255)
aTTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTc < 1:834388/99‑1 (MQ=255)
aTTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTc < 1:31407/99‑1 (MQ=255)
ttGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACAAATAGTTTCt < 2:1593528/99‑1 (MQ=255)
|
TGTAATATTATGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAACATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTCT > CP002094/306271‑306457
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGTAATATTATGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAACATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTCTGAACCACTG > CP002094/306271‑306466
|
tacaaggtgactggagttcagacgtgtgctcttccgatctGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATA < SRR7892090.423248/60‑1 (MQ=60)
AATTTTATGTGAAGACTTTTTTAAAGCTAAAAAACTGGTTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATA < SRR7892090.776660/100‑1 (MQ=60)
ATATTATGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATAT > SRR7892090.461716/1‑100 (MQ=60)
TTATGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAAT > SRR7892090.1322159/1‑100 (MQ=60)
TGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATAT < SRR7892090.906670/100‑1 (MQ=60)
GAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATG > SRR7892090.858000/1‑100 (MQ=60)
gctcttccgatctCTACAAACCTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGT < SRR7892090.1098027/87‑1 (MQ=60)
ACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTA > SRR7892090.904934/1‑100 (MQ=60)
ACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTA > SRR7892090.617047/1‑100 (MQ=60)
GTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTG > SRR7892090.618711/1‑100 (MQ=60)
TGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTC < SRR7892090.1156552/100‑1 (MQ=60)
GAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCA < SRR7892090.893600/100‑1 (MQ=60)
GCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATAT < SRR7892090.333881/100‑1 (MQ=60)
TACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCA < SRR7892090.1598495/100‑1 (MQ=60)
ACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCAC > SRR7892090.684321/1‑100 (MQ=60)
AAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTT < SRR7892090.1471303/100‑1 (MQ=60)
ACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCG > SRR7892090.828135/1‑100 (MQ=60)
GGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATAT > SRR7892090.1233823/1‑100 (MQ=60)
GACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAG > SRR7892090.310813/1‑100 (MQ=60)
ACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGT > SRR7892090.969076/1‑100 (MQ=60)
ACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGT < SRR7892090.1592006/100‑1 (MQ=60)
CTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTT < SRR7892090.1645773/100‑1 (MQ=60)
CTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTT < SRR7892090.198990/100‑1 (MQ=60)
GACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTTAA > SRR7892090.226231/1‑100 (MQ=60)
GACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAA > SRR7892090.1225753/1‑100 (MQ=60)
ACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAAT > SRR7892090.190701/1‑100 (MQ=60)
ATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCACATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTA > SRR7892090.564929/1‑100 (MQ=60)
AATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATC < SRR7892090.63781/100‑1 (MQ=60)
ATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCT < SRR7892090.885543/100‑1 (MQ=60)
ATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCT > SRR7892090.965548/1‑100 (MQ=60)
CCTCCCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAAT < SRR7892090.1436388/100‑1 (MQ=60)
aaaattttttttttttttatattttTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGTATCT < SRR7892090.117656/75‑1 (MQ=60)
CCAAAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAA < SRR7892090.1065948/100‑1 (MQ=60)
AAAATTTTACTTGTATCATTGTCAAAAATAATATAATGATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAG < SRR7892090.200886/100‑1 (MQ=60)
AAATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGC > SRR7892090.228489/1‑100 (MQ=60)
AATTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGAT < SRR7892090.1406678/100‑1 (MQ=60)
TTTTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAA < SRR7892090.1078354/100‑1 (MQ=60)
TTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAAC < SRR7892090.738113/100‑1 (MQ=60)
TTACTTGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAAC < SRR7892090.1160301/100‑1 (MQ=60)
TTGTATCATTGTCAAAAATAATATTATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAAT < SRR7892090.705921/100‑1 (MQ=60)
TGTATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTGCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATA > SRR7892090.710889/1‑100 (MQ=60)
ATCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTT < SRR7892090.1175592/100‑1 (MQ=60)
TCATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTT < SRR7892090.1670365/100‑1 (MQ=60)
ATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTCT < SRR7892090.31727/100‑1 (MQ=60)
ATTGTCAAAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTCT < SRR7892090.840933/100‑1 (MQ=60)
AAAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTCTGAACCAC < SRR7892090.731757/100‑1 (MQ=60)
AAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTCTGAACCACT < SRR7892090.853625/100‑1 (MQ=60)
AAATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTCTGAACCACT < SRR7892090.1667561/100‑1 (MQ=60)
AAATAATATAATCATATGGGTAGAGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTCTGAACCACT > SRR7892090.1403162/1‑100 (MQ=60)
AATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTCTGAACCACTG > SRR7892090.577463/1‑100 (MQ=60)
AATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTCTGAACCACTG > SRR7892090.988830/1‑100 (MQ=60)
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TGTAATATTATGTGAAGACTGTTTTGAAGCTACAAAACTAGGTACATCCGACTTGACATAATGTCCTCCCAAAATTTTACTTGTATCATTGTCAAACATAATATAATCATATGGGTAGTGTTTCATATCACGTTCGATATCAGAAATAGTTAAATTATCTGAATCTAAAGATAAACGAATAGTTTCTGAACCACTG > CP002094/306271‑306466
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
