Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F21 I1 R6	776	393.9	12922803	98.2%	12690192	138.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	3,743,290	+C	intergenic (‑66/‑116)	yiaJ ← / → galK	IclR family transcriptional regulator YiaJ/galactokinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	3,743,289	1	.	C	97.1%	583.8 / 9.2	173	intergenic (‑65/‑117)	yiaJ/galK	IclR family transcriptional regulator YiaJ/galactokinase
Reads supporting (aligned to +/- strand): ref base . (5/0); new base C (92/76); total (97/76)
Fisher's exact test for biased strand distribution p-value = 6.81e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 179 total aligned reads displayed.

CTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑A‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCAGATCATGAGTCTGAAAGAAAAA  >  NZ_CP025268/3743151‑3743423

 tctGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTGAT‑A‑A‑cc                                                                                                                                      >  2:5660730/1‑139 (MQ=255)

    ggCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑A‑ccaat                                                                                                                                   >  1:1124629/1‑136 (MQ=255)

    ggCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑A‑ccaat                                                                                                                                   <  1:6158430/140‑5 (MQ=255)

     gCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑A‑ccaatt                                                                                                                                  <  1:4381268/140‑6 (MQ=255)

      cTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTg                                                                                                                                  >  2:1426813/1‑140 (MQ=255)

      cTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTg                                                                                                                                  <  2:5513255/140‑1 (MQ=255)

       ttCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑T‑CCAtttga                                                                                                                                >  2:1234175/1‑137 (MQ=255)

         ccGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGAtt                                                                                                                               >  1:5203042/1‑140 (MQ=255)

          cGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGAttt                                                                                                                              >  2:5109770/1‑140 (MQ=255)

               ggACGCTCTTTTTGCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCGGATGGTAGCGCACAGTGTGCCGGAGTTCACGATCGCGACAGTTACTTTAT‑ATC‑CAAGTGATTTTTATg                                                                                                                         >  2:6339065/1‑140 (MQ=255)

               ggACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATg                                                                                                                         >  2:1380057/1‑140 (MQ=255)

               ggACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATg                                                                                                                         >  1:6430360/1‑140 (MQ=255)

                 aCGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATCATTTAT‑A‑ACCAATTGATTTTTATGTc                                                                                                                       >  2:2473258/1‑140 (MQ=255)

                   gCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATAACTTCTATCACCAATTTGTCGCGTACTGATGGTAGCGCAAAGTGTTCCGTAGTTAACGATCTCTACCGATAATTTAT‑A‑ACCAATTGATTTTTATGTAtt                                                                                                                     >  1:81562/1‑140 (MQ=255)

                    ctctTTTGCCTGCGCCATCTCGGTCTCTTGTTGGCCCATCACTTCTTTCCCCATTGTGTCGCGGCCGGATGGGAGCGCACAGTGTGCCGTAGTGCACGATCTCGACAGATAAGTTAT‑A‑ACCAATGGATGTTTATGTCttt                                                                                                                    >  2:2763677/1‑140 (MQ=255)

                        ttttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGaa                                                                                                                <  2:2057443/140‑1 (MQ=255)

                        ttttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGaa                                                                                                                <  2:5745193/140‑1 (MQ=255)

                               gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATtcatc                                                                                                         >  1:1676315/1‑140 (MQ=255)

                               gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATtcatc                                                                                                         >  1:1676306/1‑140 (MQ=255)

                               gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGAGTTTTATGTCTTTTGAAATtcatc                                                                                                         >  1:4667322/1‑140 (MQ=255)

                                cgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATtcatca                                                                                                        <  1:1396312/140‑1 (MQ=255)

                                 gcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCaa                                                                                                       >  2:4139777/1‑140 (MQ=255)

                                 gcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCaa                                                                                                       <  1:1497009/140‑1 (MQ=255)

                                     tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag                                                                                                   >  1:139785‑M1/1‑138 (MQ=255)

                                     tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag                                                                                                   >  1:525071‑M1/1‑138 (MQ=255)

                                      ctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCaga                                                                                                  <  2:612126‑M1/140‑4 (MQ=255)

                                       tcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagat                                                                                                 <  2:1626560‑M1/140‑5 (MQ=255)

                                          ttCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTGT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgc                                                                                              >  1:6348193‑M1/1‑133 (MQ=255)

                                           tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  1:5954139‑M1/140‑9 (MQ=255)

                                           tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  1:2324911‑M1/140‑9 (MQ=255)

                                           tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  2:1288053‑M1/140‑9 (MQ=255)

                                           tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  2:4338969‑M1/140‑9 (MQ=255)

                                           tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  2:2433858‑M1/140‑9 (MQ=255)

                                           tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  1:3345968‑M1/140‑9 (MQ=255)

                                           tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  1:1620293‑M1/140‑9 (MQ=255)

                                           tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  2:4840832‑M1/140‑9 (MQ=255)

                                            ctctTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcct                                                                                            <  1:6366846‑M1/140‑10 (MQ=255)

                                               tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                                         >  1:4981532‑M1/1‑128 (MQ=255)

                                               tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                                         >  1:4215408‑M1/1‑128 (MQ=255)

                                               tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                                         >  2:6077645‑M1/1‑128 (MQ=255)

                                               tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                                         >  1:3702007‑M1/1‑128 (MQ=255)

                                               tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                                         >  1:4215765‑M1/1‑128 (MQ=255)

                                               tttttttCCCATCAATTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                                         >  1:4215753‑M1/1‑128 (MQ=255)

                                                ttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgtt                                                                                        <  1:3099325‑M1/140‑14 (MQ=255)

                                                   tttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaa                                                                                     <  1:2710862‑M1/140‑17 (MQ=255)

                                                   tttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaa                                                                                     <  2:2943661‑M1/140‑17 (MQ=255)

                                                     tCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaa                                                                                   >  1:4004252‑M1/1‑122 (MQ=255)

                                                     tCCCATCACTTCGTGCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATGTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaa                                                                                   <  2:3314481‑M1/140‑19 (MQ=255)

                                                          tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  2:2039756‑M1/140‑24 (MQ=255)

                                                          tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  2:3553821‑M1/140‑24 (MQ=255)

                                                          tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  2:265233‑M1/140‑24 (MQ=255)

                                                          tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  1:2820091‑M1/140‑24 (MQ=255)

                                                          tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  1:4884407‑M1/140‑24 (MQ=255)

                                                          tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  2:5215837‑M1/140‑24 (MQ=255)

                                                              ttcgtTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgat                                                                          <  2:3800090‑M1/140‑28 (MQ=255)

                                                                     cccATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttg                                                                   <  1:5465018‑M1/140‑35 (MQ=255)

                                                                        aTTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaa                                                                >  2:925925‑M1/1‑103 (MQ=255)

                                                                          tttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatc                                                              >  2:372341‑M1/1‑101 (MQ=255)

                                                                                 cgTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttc                                                       >  1:2609985‑M1/1‑94 (MQ=255)

                                                                                  gTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcg                                                      <  1:304735‑M1/140‑48 (MQ=255)

                                                                                  gTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcg                                                      <  1:304973‑M1/140‑48 (MQ=255)

                                                                                   tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc                                                     >  1:1166461‑M1/1‑92 (MQ=255)

                                                                                   tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc                                                     >  2:634113‑M1/1‑92 (MQ=255)

                                                                                   tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc                                                     >  1:3846383‑M1/1‑92 (MQ=255)

                                                                                           gTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaa                                             >  1:6272633‑M1/1‑84 (MQ=255)

                                                                                             aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATCA‑C‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat                                           >  2:1212388‑M1/1‑82 (MQ=255)

                                                                                             aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat                                           >  1:1154753‑M1/1‑82 (MQ=255)

                                                                                             aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat                                           >  1:2571657‑M1/1‑82 (MQ=255)

                                                                                             aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat                                           >  2:1250283‑M1/1‑82 (MQ=255)

                                                                                               cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattt                                         >  1:4277808‑M1/1‑80 (MQ=255)

                                                                                               cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattt                                         >  1:3179754‑M1/1‑80 (MQ=255)

                                                                                               cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattt                                         >  2:4493558‑M1/1‑80 (MQ=255)

                                                                                               cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgacttgttaaaaagtgatcgatatatttgaaatcaagtttagcatattgaaattt                                         >  2:4753514‑M1/1‑80 (MQ=255)

                                                                                                 cAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaatttta                                       <  2:2515856‑M1/140‑63 (MQ=255)

                                                                                                    aGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagc                                    >  1:687229‑M1/1‑75 (MQ=255)

                                                                                                          ccGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaa                              >  2:1527729‑M1/1‑69 (MQ=255)

                                                                                                              aGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcg                          <  2:4160365‑M1/140‑76 (MQ=255)

                                                                                                              aGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcg                          <  1:5289441‑M1/140‑76 (MQ=255)

                                                                                                               gTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcga                         <  1:4558971‑M1/140‑77 (MQ=255)

                                                                                                                ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagcccaaaaagcgat                        >  2:514998‑M1/1‑63 (MQ=255)

                                                                                                                ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat                        >  1:2689855‑M1/1‑63 (MQ=255)

                                                                                                                ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat                        >  2:3370851‑M1/1‑63 (MQ=255)

                                                                                                                ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat                        >  2:4941054‑M1/1‑63 (MQ=255)

                                                                                                                ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat                        >  1:2492728‑M1/1‑63 (MQ=255)

                                                                                                                ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  2:4666221‑M1/86‑24 (MQ=255)

                                                                                                                ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              >  1:4666221‑M1/1‑63 (MQ=255)

                                                                                                                   aCGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaa                     <  1:6166658‑M1/140‑81 (MQ=255)

                                                                                                                       tctcGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaa                 >  2:2220700‑M1/1‑56 (MQ=255)

                                                                                                                        ctcGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaa                >  1:5761489‑M1/1‑55 (MQ=255)

                                                                                                                          cGACAGATAATTTAT‑A‑ACCAATTGATTTTTATTTATTTTGAAATTCATCAATAagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagacaaaaaagcgatcaaaaataca              >  2:738072‑M1/1‑53 (MQ=255)

                                                                                                                          cGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaataaaaca              >  1:159617‑M1/1‑53 (MQ=255)

                                                                                                                          cGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaaca              >  1:1254168‑M1/1‑53 (MQ=255)

                                                                                                                               gATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaa         >  1:2216521‑M1/1‑48 (MQ=255)

                                                                                                                                aTAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaag        >  1:4942529‑M1/1‑47 (MQ=255)

                                                                                                                                aTAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaag        >  2:3419128‑M1/1‑47 (MQ=255)

                                                                                                                                aTAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgagaaaaaaaacaaggaag        >  2:710326‑M1/1‑47 (MQ=255)

                                                                                                                                 tAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacgaggaagc       >  2:5652017‑M1/1‑46 (MQ=255)

                                                                                                                                   aTTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcct     >  2:3304345‑M1/1‑44 (MQ=255)

                                                                                                                                      tat‑a‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaagtaagcctggg  >  2:5259039‑M1/1‑41 (MQ=255)

                                                                                                                                      tat‑a‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcctggg  >  2:5022605‑M1/1‑41 (MQ=255)

CTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑A‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCAGATCATGAGTCTGAAAGAAAAA  >  NZ_CP025268/3743151‑3743423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGCGAAACAGACTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCA  >  NZ_CP025268/3743140‑3743401

CGCGAAACAGACTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑C                                                                                                                 <  SRR14920171.5942234/151‑1 (MQ=60)

CGCGAAACAGACTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑C                                                                                                                 <  SRR14920171.123108/151‑1 (MQ=60)

CGCGAAACAGACTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑C                                                                                                                 >  SRR14920171.315172/1‑151 (MQ=60)

CGCGAAACAGACTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑C                                                                                                                 <  SRR14920171.1929832/151‑1 (MQ=60)

    AAACAGACTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAAT                                                                                                              >  SRR14920171.1129781/1‑151 (MQ=60)

      ACAGACTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTG                                                                                                            <  SRR14920171.1494691/151‑1 (MQ=60)

         GACTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATT                                                                                                         >  SRR14920171.5226994/1‑151 (MQ=60)

               GGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATCATTTATAA‑Ccaagtgagggttatg                                                                                                  >  SRR14920171.5461929/1‑136 (MQ=60)

               GGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATG                                                                                                   >  SRR14920171.6462341/1‑151 (MQ=60)

               GGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATG                                                                                                   <  SRR14920171.1170956/151‑1 (MQ=60)

               GGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATG                                                                                                   <  SRR14920171.6188708/151‑1 (MQ=60)

               GGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATG                                                                                                   >  SRR14920171.1612030/1‑151 (MQ=60)

                GCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGT                                                                                                  <  SRR14920171.4401273/151‑1 (MQ=60)

                  TTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCT                                                                                                <  SRR14920171.4525049/151‑1 (MQ=60)

                   TCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATAACTTCTATCACCAATTTGTCGCGTACTGATGGTAGCGCAAAGTGTTCCGTAGTTAACGATCTCTACCGATAATTTATAACCAATTGATTTTTATGTATT                                                                                               >  SRR14920171.82006/1‑151 (MQ=60)

                         TGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAA                                                                                         <  SRR14920171.430631/151‑1 (MQ=60)

                         TGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAA                                                                                         <  SRR14920171.4834504/151‑1 (MQ=60)

                              GCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCAT                                                                                    <  SRR14920171.4988610/151‑1 (MQ=60)

                               CTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATC                                                                                   >  SRR14920171.4179383/1‑151 (MQ=60)

                               CTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATC                                                                                   >  SRR14920171.1683833/1‑151 (MQ=60)

                               CTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATC                                                                                   >  SRR14920171.1683842/1‑151 (MQ=60)

                               CTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGAGTTTTATGTCTTTTGAAATTCATC                                                                                   >  SRR14920171.4688697/1‑151 (MQ=60)

                                     TTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag                                                                             >  SRR14920171.527421/1‑149 (MQ=60)

                                     TTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag                                                                             >  SRR14920171.140512/1‑149 (MQ=60)

                                     TTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag                                                                             >  SRR14920171.140504/1‑149 (MQ=60)

                                        CTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagatt                                                                          <  SRR14920171.1730742/151‑6 (MQ=60)

                                          GCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTGTAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgc                                                                        >  SRR14920171.6379678/1‑144 (MQ=60)

                                           CGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                       <  SRR14920171.1402665/151‑9 (MQ=60)

                                            GCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcct                                                                      <  SRR14920171.1503800/151‑10 (MQ=60)

                                               ATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                   >  SRR14920171.3718920/1‑139 (MQ=60)

                                               ATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                   >  SRR14920171.4235038/1‑139 (MQ=60)

                                               ATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                   >  SRR14920171.4234939/1‑139 (MQ=60)

                                               ATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                   >  SRR14920171.4234679/1‑139 (MQ=60)

                                               ATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                   >  SRR14920171.5004419/1‑139 (MQ=60)

                                               ATCTCGTTCTCTTTTTTTCCCATCAATTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                   >  SRR14920171.4235026/1‑139 (MQ=60)

                                                     TTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaa                                                             >  SRR14920171.4022625/1‑133 (MQ=60)

                                                      TCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaag                                                            <  SRR14920171.3361225/151‑20 (MQ=60)

                                                      TCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaag                                                            <  SRR14920171.1508333/151‑20 (MQ=60)

                                                      TCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaag                                                            <  SRR14920171.1627572/151‑20 (MQ=60)

                                                      TCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaag                                                            <  SRR14920171.5601677/151‑20 (MQ=60)

                                                      TCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaag                                                            <  SRR14920171.2335490/151‑20 (MQ=60)

                                                      TCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaag                                                            <  SRR14920171.5982777/151‑20 (MQ=60)

                                                      TCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaag                                                            <  SRR14920171.4593782/151‑20 (MQ=60)

                                                      TCTCTTTTGTTCCCATCACTTCTGTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaag                                                            <  SRR14920171.6231603/151‑20 (MQ=60)

                                                       CTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagt                                                           <  SRR14920171.6398430/151‑21 (MQ=60)

                                                         CTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATGTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtga                                                         >  SRR14920171.6080383/1‑129 (MQ=60)

                                                           TTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatc                                                       <  SRR14920171.3113368/151‑25 (MQ=60)

                                                           TTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatc                                                       <  SRR14920171.3113498/151‑25 (MQ=60)

                                                              TTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgat                                                    <  SRR14920171.2723212/151‑28 (MQ=60)

                                                                TCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatat                                                  <  SRR14920171.6409620/151‑30 (MQ=60)

                                                                     TCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttg                                             <  SRR14920171.2833068/151‑35 (MQ=60)

                                                                     TCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttg                                             <  SRR14920171.2832993/151‑35 (MQ=60)

                                                                     TCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttg                                             >  SRR14920171.2254307/1‑117 (MQ=60)

                                                                     TCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttg                                             <  SRR14920171.4906817/151‑35 (MQ=60)

                                                                        CTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaatgtgatcgatatatttgaaa                                          >  SRR14920171.6327290/1‑114 (MQ=60)

                                                                        CTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaa                                          >  SRR14920171.3821021/1‑114 (MQ=60)

                                                                         TTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaat                                         <  SRR14920171.2631367/151‑39 (MQ=60)

                                                                         TTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaat                                         <  SRR14920171.1386333/151‑39 (MQ=60)

                                                                         TTCTGTCCCCATTTGGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaat                                         <  SRR14920171.5291723/151‑39 (MQ=60)

                                                                             TTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaag                                     <  SRR14920171.165945/151‑43 (MQ=60)

                                                                                CCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagttt                                  <  SRR14920171.5490157/151‑46 (MQ=60)

                                                                                 CCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttc                                 >  SRR14920171.2621846/1‑105 (MQ=60)

                                                                                   ATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc                               >  SRR14920171.3864000/1‑103 (MQ=60)

                                                                                   ATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc                               >  SRR14920171.1171817/1‑103 (MQ=60)

                                                                                           GCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaa                       >  SRR14920171.6303649/1‑95 (MQ=60)

                                                                                             GTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat                     <  SRR14920171.306407/151‑59 (MQ=60)

                                                                                             GTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat                     <  SRR14920171.306169/151‑59 (MQ=60)

                                                                                             GTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat                     >  SRR14920171.2583340/1‑93 (MQ=60)

                                                                                             GTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat                     >  SRR14920171.1160043/1‑93 (MQ=60)

                                                                                               CCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattt                   >  SRR14920171.4297332/1‑91 (MQ=60)

                                                                                               CCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattt                   >  SRR14920171.3194242/1‑91 (MQ=60)

                                                                                               CCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattt                   >  SRR14920171.3731857/1‑91 (MQ=60)

                                                                                                    TGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagc              >  SRR14920171.690331/1‑86 (MQ=60)

                                                                                                    TGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagc              >  SRR14920171.689670/1‑86 (MQ=60)

                                                                                                        AGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaa          >  SRR14920171.2754135/1‑82 (MQ=60)

                                                                                                        AGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaa          >  SRR14920171.5052382/1‑82 (MQ=60)

                                                                                                        AGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaa          >  SRR14920171.2556549/1‑82 (MQ=60)

                                                                                                          CGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaa        >  SRR14920171.235127/1‑80 (MQ=60)

                                                                                                            CAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               <  SRR14920171.3979054/78‑1 (MQ=60)

                                                                                                                GTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgctgtctcttatacacatctccgagcccacgagactacgctgca  >  SRR14920171.4687591/1‑74 (MQ=60)

                                                                                                                GTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.2504049/1‑74 (MQ=60)

                                                                                                                GTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.2702105/1‑74 (MQ=60)

                                                                                                                GTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.2702402/1‑74 (MQ=60)

                                                                                                                GTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.5347228/1‑74 (MQ=60)

                                                                                                                GTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.746666/1‑74 (MQ=60)

                                                                                                                        TAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.5788512/1‑66 (MQ=60)

                                                                                                                         AGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               <  SRR14920171.4278663/65‑1 (MQ=60)

                                                                                                                         AGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               <  SRR14920171.5313756/65‑1 (MQ=60)

                                                                                                                          GTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.1259917/1‑64 (MQ=60)

                                                                                                                          GTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.4942600/1‑64 (MQ=60)

                                                                                                                          GTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               <  SRR14920171.4579769/64‑1 (MQ=60)

                                                                                                                          GTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.3224752/1‑64 (MQ=60)

                                                                                                                          GGTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.160439/1‑64 (MQ=60)

                                                                                                                              ACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               <  SRR14920171.1206627/60‑1 (MQ=60)

                                                                                                                              ACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               <  SRR14920171.6197002/60‑1 (MQ=60)

                                                                                                                               CGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.2226649/1‑59 (MQ=60)

                                                                                                                                GATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.4965218/1‑58 (MQ=60)

                                                                                                                                          GATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.2391668/1‑48 (MQ=60)

                                                                                                                                             AATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               <  SRR14920171.6194124/45‑1 (MQ=60)

                                                                                                                                              ATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.1010746/1‑44 (MQ=60)

                                                                                                                                              ATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.2327882/1‑44 (MQ=60)

                                                                                                                                              ATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.3088563/1‑44 (MQ=60)

                                                                                                                                              ATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.3916687/1‑44 (MQ=60)

                                                                                                                                              ATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.6197894/1‑44 (MQ=60)

                                                                                                                                              ATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.449048/1‑44 (MQ=60)

                                                                                                                                              ATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.5995563/1‑44 (MQ=60)

                                                                                                                                              ATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.5995471/1‑44 (MQ=60)

                                                                                                                                              ATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.4841347/1‑44 (MQ=60)

                                                                                                                                              ATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.5139670/1‑44 (MQ=60)

                                                                                                                                               TTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.6453255/1‑43 (MQ=60)

                                                                                                                                                  ATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               <  SRR14920171.2216919/40‑1 (MQ=60)

                                                                                                                                                   TAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.614773/1‑39 (MQ=60)

                                                                                                                                                       CAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               >  SRR14920171.2291891/1‑35 (MQ=60)

                                                                                                                                                       CAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               <  SRR14920171.1433303/35‑1 (MQ=60)

                                                                                                                                                       CAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                               <  SRR14920171.1324126/35‑1 (MQ=60)

CGCGAAACAGACTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCA  >  NZ_CP025268/3743140‑3743401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`