Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
150 |
26.0 |
2053212 |
90.0% |
1847890 |
107.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
AM260480 |
507,425 |
+A |
coding (27/564 nt) |
h16_B0448 → |
fragment of ABC‑type transport system,periplasmic component: APC family |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | AM260480 | 507,423 | 1 | . | A | 97.2%
| 132.7
/ ‑3.3
| 36 | coding (25/564 nt) | h16_B0448 | fragment of ABC‑type transport system,periplasmic component: APC family |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base A (17/18); total (18/18) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.79e-01 |
ATACCACGGGCGGCGTTCGCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATG‑AA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCGGGCGCGACCAATA > AM260480/507313‑507550
|
aTACCACGGGCGGCGTTCGCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATcgc > 2:447937/1‑134 (MQ=255)
aTACCACGGGCGGCGTTCGCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATcg < 1:373757/133‑1 (MQ=255)
aTACCACGGGCGGCGTTCGCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATcg > 2:373757/1‑133 (MQ=255)
aCGGGCGGCGTTCGCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATcgccgccg > 2:331375/1‑134 (MQ=255)
gcgTTCGCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCgcgctggc > 1:868645/1‑134 (MQ=255)
ttCGCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCgcgctggcgct > 2:936718/1‑134 (MQ=255)
ccgccTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTc < 1:936718/134‑1 (MQ=255)
tGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGgcgc < 1:331375/134‑1 (MQ=255)
tGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGgcgc < 1:447937/134‑1 (MQ=255)
aGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGcc < 1:787590/134‑1 (MQ=255)
aGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGcc < 2:868645/134‑1 (MQ=255)
cGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGgcgc > 1:942458/1‑110 (MQ=255)
cGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGgcgc < 2:942458/110‑1 (MQ=255)
cGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCg > 2:548153/1‑134 (MQ=255)
cGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCg > 1:514583/1‑134 (MQ=255)
gACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATcg > 1:526405/1‑55 (MQ=255)
gACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATcg < 2:526405/55‑1 (MQ=255)
gACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAg < 1:947052/92‑1 (MQ=255)
gACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAg > 2:947052/1‑92 (MQ=255)
gACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCtga > 1:278854/1‑98 (MQ=255)
gACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCtga < 2:278854/98‑1 (MQ=255)
gACGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGcc > 1:621766/1‑134 (MQ=255)
cGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGgcgc > 1:950025/1‑83 (MQ=255)
cGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGgcgc > 2:503570/1‑83 (MQ=255)
cGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGgcgc < 2:950025/83‑1 (MQ=255)
cGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGgcgc < 1:503570/83‑1 (MQ=255)
cGGGCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGt > 1:906623/1‑134 (MQ=255)
cGGGCAATGACAATTCGACGGAGGAGACATG‑AACCAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGt > 2:456449/1‑134 (MQ=255)
gCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTc < 2:325712/70‑1 (MQ=255)
gCAATGACAATTCGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTc > 1:325712/1‑70 (MQ=255)
cGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCggg < 1:500515/133‑1 (MQ=255)
cGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCggg < 1:456449/133‑1 (MQ=255)
cGACGGAGGAGACATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCggg < 2:948514/133‑1 (MQ=255)
agaCATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCGGGCGCGACCAAt < 2:514583/134‑1 (MQ=255)
agaCATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCGGGCGCGACCAAt < 1:545275/134‑1 (MQ=255)
gaCATGAAA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCGGGCGCGACCAATa > 2:281548/1‑134 (MQ=255)
|
ATACCACGGGCGGCGTTCGCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATG‑AA‑CAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCGGGCGCGACCAATA > AM260480/507313‑507550
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCAATACCACGGGCGGCGTTCGCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATG‑AACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCGGGCGCGACCAATACGATGGCTTTCTGCTTGCCGT > AM260480/507310‑507571
|
GCAATACCACGGGCGGCGTTCGCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCG > GWNJ‑0478:712:GW2002102894th:2:2206:13800:72240/1‑150 (MQ=60)
CAATACCACGGGCGGCGTTCGCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGC < GWNJ‑0478:712:GW2002102894th:2:1208:17277:94525/150‑1 (MQ=60)
GCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCC < GWNJ‑0478:712:GW2002102894th:2:2210:15727:85916/150‑1 (MQ=60)
ATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAG < GWNJ‑0478:712:GW2002102894th:2:1207:14189:32154/150‑1 (MQ=60)
ATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAG < GWNJ‑0478:712:GW2002102894th:2:1212:2261:25718/150‑1 (MQ=60)
ccgtctcgtgggctcggagatgtgtataagagacagACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAG < GWNJ‑0478:712:GW2002102894th:2:1216:10105:35339/113‑1 (MQ=60)
GAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAG < GWNJ‑0478:712:GW2002102894th:2:2203:18727:47443/150‑1 (MQ=60)
gggctcggagatgtgtataagagacagCCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGT < GWNJ‑0478:712:GW2002102894th:2:2212:1840:47655/122‑1 (MQ=60)
GTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGctgtctctt > GWNJ‑0478:712:GW2002102894th:2:2212:17434:20140/1‑140 (MQ=60)
GTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGG > GWNJ‑0478:712:GW2002102894th:2:2101:13901:6574/1‑150 (MQ=60)
GTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATG‑AAacagaaactgtctcttatacacatctccgagcccacgagacggagctacatctcgtatgccgtcttctgcttga > GWNJ‑0478:712:GW2002102894th:2:2210:16656:28711/1‑75 (MQ=60)
GTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATG‑AAacagaaactgtctcttatacacatctccgagcccacgagacggagctacatctcgtatgccgtcttctgcttga > GWNJ‑0478:712:GW2002102894th:2:2101:20075:37535/1‑75 (MQ=60)
CCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCctgtctcttatacacatctccgagcccacgagacggagctacatctcgtatgccgtcttctgctt > GWNJ‑0478:712:GW2002102894th:2:2101:7692:88977/1‑85 (MQ=60)
CCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATctgtctcttatacacatctccg > GWNJ‑0478:712:GW2002102894th:2:1203:4503:85939/1‑128 (MQ=60)
CCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCG > GWNJ‑0478:712:GW2002102894th:2:2108:6778:31936/1‑150 (MQ=60)
CCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCCGGCGCgacaagatcgcccgcagccgaacgggattggggctccaggccccatcctgtctcttatacacatc > GWNJ‑0478:712:GW2002102894th:2:2213:21078:98435/1‑85 (MQ=60)
ACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGctgtctcttatacacatctccgagcccacgagacgg > GWNJ‑0478:712:GW2002102894th:2:2212:11789:64284/1‑113 (MQ=60)
ACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTC > GWNJ‑0478:712:GW2002102894th:2:2211:12349:8119/1‑150 (MQ=60)
TAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCctgtctcttatacacatctccgagcccacgagacggagctacatctcgt > GWNJ‑0478:712:GW2002102894th:2:1204:3076:93222/1‑100 (MQ=60)
ATTCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCGGGCGCGACCAATACG > GWNJ‑0478:712:GW2002102894th:2:2204:20602:57708/1‑149 (MQ=60)
TCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCGGGCGCGACCAATACGAT < GWNJ‑0478:712:GW2002102894th:2:1216:20562:17951/149‑1 (MQ=60)
TCGACGGAGGAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCGGGCGCGACCAATACGAT < GWNJ‑0478:712:GW2002102894th:2:1212:3762:73796/149‑1 (MQ=60)
GAGACATGAAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCGGGCGCGACCAATACGATGGCTTTCTGC < GWNJ‑0478:712:GW2002102894th:2:2102:15983:18930/150‑1 (MQ=60)
gaAACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCGGGCGCGACCAATACGATGGCTTTCTGCTTGCCGT < GWNJ‑0478:712:GW2002102894th:2:1202:3828:4412/148‑1 (MQ=60)
|
GCAATACCACGGGCGGCGTTCGCCGCCTGACATGGGGAGCCGTTCAGGCTCGCGTCCGCACGGGCACCACATAGAGTGCCTGACGGGCAATGACAATTCGACGGAGGAGACATG‑AACAGAAATGCGTGGCAATCGCCGCCGCGCTGGCGCTGCTCGCGCCGGCGCTGGCCAGTGCTGAAGTGAAGGTCGGCATTCTTGCCACCCTTTCGGGGCCGTCGGCCGATGTCGGGCGCGACCAATACGATGGCTTTCTGCTTGCCGT > AM260480/507310‑507571
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
