Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
9 4 5
10 4 5
11 4 5
12 4 5
4 16 20

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 25 48
Multiple Base Substitutions 0 0
Deletions 5 9
Insertions 7 10
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 37 67

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A9 F17 I1 R1 5 0 17.4 821206 93.4% 767006 139.7
A9 F35 I1 R1 8 0 31.9 1599366 92.4% 1477814 133.9
A9 F43 I1 R1 6 0 37.1 1810740 92.4% 1673123 136.9
A9 F60 I0 R1 1078 0 79.7 3885236 94.2% 3659892 134.7
A9 F60 I1 R1 14 0 245.9 10716718 96.2% 10309482 147.9
A10 F16 I1 R1 6 0 50.0 2518328 92.1% 2319380 134.1
A10 F32 I1 R1 12 0 315.6 13815434 95.8% 13235185 148.0
A10 F42 I1 R1 7 0 48.1 2399244 92.7% 2224099 134.6
A10 F54 I0 R1 1784 0 57.4 2855260 92.9% 2652536 134.0
A10 F54 I1 R1 14 0 370.3 15942160 96.5% 15384184 149.2
A11 F12 I1 R1 7 0 56.1 2956700 92.0% 2720164 129.1
A11 F26 I1 R1 7 0 58.2 2964606 91.5% 2712614 133.6
A11 F36 I1 R1 6 0 70.9 3492122 93.1% 3251165 135.0
A11 F50 I0 R1 804 0 34.5 1706502 92.5% 1578514 135.5
A11 F50 I1 R1 15 0 439.1 20400512 95.1% 19400886 148.7
A12 F17 I1 R1 7 0 13.3 632202 93.2% 589212 138.1
A12 F34 I1 R1 0 0 44.0 2204076 93.1% 2051994 133.4
A12 F41 I1 R1 6 0 26.7 1286810 92.9% 1195446 138.0
A12 F55 I0 R1 2523 0 96.7 4820918 92.8% 4473811 133.7
A12 F55 I1 R1 13 0 179.6 7939514 96.1% 7629872 145.8

Mutation Needle Plot

Mutation Targets

Entries to show