Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 1 1
2 1 1
3 1 1
4 1 1
5 1 1
6 1 1
7 1 1
8 1 1
9 1 1
10 1 1
11 1 1
12 1 1
13 1 1
14 1 1
15 1 1
16 1 1
17 1 1
18 1 1
19 1 1
20 1 1
21 1 1
22 1 1
23 1 1
24 1 1
25 1 1
26 1 1
27 1 1
28 1 1
29 1 1
30 1 1
31 1 1
32 1 1
33 1 1
34 1 1
35 1 1
36 1 1
37 1 1
38 1 1
39 1 1
40 1 1
41 1 1
42 1 1
43 1 1
44 1 1
45 1 1
46 1 1
47 1 1
47 47 47

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 183 436
Multiple Base Substitutions 1 1
Deletions 34 177
Insertions 19 157
Mobile Element Insertions 24 70
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 261 841

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F60 I1 R1 19 0 52.3 1769856 99.0% 1752157 137.3
A2 F60 I1 R1 15 0 55.1 2015454 99.1% 1997314 138.4
A3 F60 I1 R1 16 0 276.8 9669196 99.2% 9591842 138.4
A4 F60 I1 R1 16 0 42.5 1464094 99.1% 1450917 138.3
A5 F60 I1 R1 19 0 67.9 2307380 99.1% 2286613 137.8
A6 F60 I1 R1 17 0 59.4 2027168 99.1% 2008923 137.9
A7 F60 I1 R1 13 0 67.0 2289906 99.2% 2271586 138.0
A8 F60 I1 R1 16 0 30.2 1024164 99.1% 1014946 137.8
A9 F60 I1 R1 21 0 123.7 4184002 99.2% 4150529 137.8
A10 F60 I1 R1 18 0 111.2 3814234 99.3% 3787534 138.1
A11 F60 I1 R1 17 0 124.2 4215036 99.0% 4172885 138.1
A12 F60 I1 R1 20 0 57.0 1936532 99.1% 1919103 138.0
A13 F60 I1 R1 24 0 115.9 3905994 99.1% 3870840 138.0
A14 F60 I1 R1 16 0 97.8 3092764 99.1% 3064929 137.7
A15 F60 I1 R1 18 0 118.3 4009392 99.2% 3977316 138.0
A16 F60 I1 R1 20 0 90.6 3077528 99.0% 3046752 137.8
A17 F60 I1 R1 21 0 68.5 2313054 98.9% 2287610 137.6
A18 F60 I1 R1 17 0 19.3 650438 98.9% 643283 137.3
A19 F60 I1 R1 18 0 74.2 2511834 99.1% 2489227 137.9
A20 F60 I1 R1 17 0 55.4 1884452 98.9% 1863723 138.0
A21 F60 I1 R1 16 0 125.0 4250738 99.1% 4212481 138.0
A22 F60 I1 R1 16 0 96.1 3263856 99.1% 3234481 138.1
A23 F60 I1 R1 20 0 97.1 3292108 99.2% 3265771 138.3
A24 F60 I1 R1 19 0 84.9 2879288 99.1% 2853374 137.7
A25 F60 I1 R1 22 0 70.1 2377468 99.1% 2356070 137.9
A26 F60 I1 R1 18 0 79.7 2741546 99.1% 2716872 138.0
A27 F60 I1 R1 13 0 81.0 2746716 99.2% 2724742 138.1
A28 F60 I1 R1 18 0 70.7 2395144 99.2% 2375982 137.9
A29 F60 I1 R1 20 0 71.2 2416366 99.1% 2394618 138.1
A30 F60 I1 R1 15 0 49.4 1682684 98.9% 1664174 137.9
A31 F60 I1 R1 17 0 65.4 2242240 99.1% 2222059 138.0
A32 F60 I1 R1 17 0 53.4 1816820 99.1% 1800468 137.9
A33 F60 I1 R1 19 0 91.1 3004654 99.2% 2980616 137.9
A34 F60 I1 R1 18 0 143.7 4900696 99.1% 4856589 137.9
A35 F60 I1 R1 20 0 36.7 1244762 99.1% 1233559 138.3
A36 F60 I1 R1 17 0 116.8 3946860 99.2% 3915285 138.2
A37 F60 I1 R1 17 0 71.1 2420944 99.2% 2401576 138.5
A38 F60 I1 R1 18 0 80.6 2775530 99.2% 2753325 138.8
A39 F60 I1 R1 19 0 46.8 1599832 99.2% 1587033 138.0
A40 F60 I1 R1 21 0 90.3 3067138 99.1% 3039533 138.1
A41 F60 I1 R1 15 0 66.5 2265750 99.1% 2245358 137.8
A42 F60 I1 R1 19 0 81.6 2766894 99.0% 2739225 138.1
A43 F60 I1 R1 18 0 59.0 2023072 99.0% 2002841 138.2
A44 F60 I1 R1 18 0 142.5 4932706 99.3% 4898177 138.1
A45 F60 I1 R1 18 0 92.2 3142574 99.1% 3114290 138.1
A46 F60 I1 R1 17 0 83.7 2854354 99.1% 2828664 138.1
A47 F60 I1 R1 18 0 97.2 3313954 99.1% 3284128 137.8

Mutation Needle Plot

Mutation Targets

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