Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
9 3 4
10 3 4
11 3 4
12 3 4
5 13 17

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 20 85
Multiple Base Substitutions 0 0
Deletions 6 71
Insertions 3 34
Mobile Element Insertions 13 40
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 42 230

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 10 0 125.5 6236248 93.4% 5824655 100.0
A9 F27 I0 R1 100 0 593.7 18696742 98.8% 18472381 149.2
A9 F48 I0 R1 126 0 278.0 8705814 99.1% 8627461 149.9
A9 F63 I0 R1 265 0 130.2 4105013 97.9% 4018807 149.9
A9 F63 I1 R1 11 0 119.9 3816208 97.5% 3720802 149.9
A10 F27 I0 R1 118 0 640.9 20101374 98.9% 19880258 149.6
A10 F48 I0 R1 144 0 263.9 8264906 98.9% 8173992 149.9
A10 F64 I0 R1 841 0 115.5 3654542 97.6% 3566832 149.9
A10 F64 I1 R1 11 0 64.6 2104012 96.0% 2019851 149.9
A11 F27 I0 R1 132 0 272.2 8524044 99.0% 8438803 149.8
A11 F48 I0 R1 112 0 307.6 9617374 99.1% 9530817 149.9
A11 F64 I0 R1 613 0 127.6 4037778 97.7% 3944909 149.9
A11 F64 I1 R1 13 0 136.1 4526780 95.4% 4318548 149.7
A12 F27 I0 R1 133 0 253.4 7918728 99.1% 7847459 149.9
A12 F48 I0 R1 121 0 619.2 19427418 98.9% 19213716 149.8
A12 F63 I0 R1 525 0 118.7 3752896 97.7% 3666579 149.9
A12 F63 I1 R1 12 0 98.7 3185386 96.2% 3064341 149.9

Mutation Needle Plot

Mutation Targets

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