ALE, flask, and isolate counts
| ALE replicate |
Flask count |
Isolate count |
| 0 |
1 |
1 |
| 1 |
1 |
1 |
| 2 |
1 |
1 |
| 3 |
1 |
1 |
| 4 |
1 |
1 |
| 5 |
1 |
1 |
| 6 |
1 |
1 |
| 7 |
1 |
1 |
| 8 |
1 |
1 |
| 9 |
1 |
1 |
| 10 |
1 |
1 |
| 11 |
11 |
11 |
ALE experiment mutation counts
| Mutation Type |
Unique |
Observed |
| Single Base Substitutions |
30 |
39 |
| Multiple Base Substitutions |
1 |
1 |
| Deletions |
12 |
12 |
| Insertions |
5 |
5 |
| Mobile Element Insertions |
5 |
8 |
| Amplifications |
0 |
0 |
| Gene Conversions |
0 |
0 |
| Inversions |
0 |
0 |
| Total |
53 |
65 |
Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Unassigned Missing Coverage Evidence |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
8 |
31 |
108.7 |
1897362 |
98.8% |
1874593 |
250.2 |
|
A1 F50 I1 R1
|
13 |
6 |
112.5 |
2055945 |
97.9% |
2012770 |
249.3 |
|
A2 F50 I1 R1
|
16 |
22 |
109.8 |
1827095 |
91.9% |
1679100 |
289.7 |
|
A3 F50 I1 R1
|
12 |
12 |
105.9 |
1804525 |
91.0% |
1642117 |
288.0 |
|
A4 F50 I1 R1
|
14 |
5 |
105.9 |
1924593 |
98.4% |
1893799 |
249.8 |
|
A5 F50 I1 R1
|
18 |
22 |
131.6 |
2279798 |
98.6% |
2247880 |
251.5 |
|
A6 F50 I1 R1
|
12 |
50 |
83.4 |
1507596 |
97.3% |
1466890 |
249.2 |
|
A7 F50 I1 R1
|
12 |
42 |
116.4 |
2092198 |
98.7% |
2064999 |
247.1 |
|
A8 F50 I1 R1
|
13 |
18 |
119.9 |
2123243 |
98.6% |
2093517 |
250.8 |
|
A9 F50 I1 R1
|
13 |
13 |
155.1 |
2901373 |
96.8% |
2808529 |
248.3 |
|
A10 F50 I1 R1
|
12 |
9 |
131.7 |
2337049 |
98.8% |
2309004 |
250.5 |
Mutation Needle Plot
