mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,336,492 | 0 | T | G | 61.5% | ‑0.6 / 10.0 | 13 | T218P (ACC→CCC) | fumB | class I fumarate hydratase |
| * | NZ_CP009273 | 2,336,748 | 0 | C | A | 55.6% | 8.2 / 12.6 | 9 | D301Y (GAT→TAT) | yfaL | AIDA‑I family autotransporter adhesin YfaL/EhaC |
| * | NZ_CP009273 | 4,594,167 | 0 | C | T | 55.6% | ‑5.0 / 10.3 | 18 | S64F (TCT→TTT) | bglJ | DNA‑binding transcriptional activator BglJ |
| * | NZ_CP009273 | 353,601 | 0 | C | A | 55.0% | 7.1 / 23.4 | 20 | L267F (TTG→TTT) | cynR | transcriptional regulator CynR |
| * | NZ_CP009273 | 1,125,798 | 0 | A | C | 54.5% | 5.5 / 11.5 | 11 | G174G (GGT→GGG) | flgA | flagellar basal body P‑ring formation chaperone FlgA |
| * | NZ_CP009273 | 858,015 | 0 | G | T | 53.8% | 3.8 / 17.3 | 13 | H16Q (CAC→CAA) | ybiW | glycyl radical protein |
| * | NZ_CP009273 | 3,502,021 | 0 | T | A | 53.8% | 3.5 / 16.9 | 13 | E384D (GAA→GAT) | yhfW | phosphopentomutase |
| * | NZ_CP009273 | 3,549,566 | 0 | T | C | 53.3% | 4.9 / 17.9 | 15 | S215G (AGT→GGT) | rtcA | RNA 3'‑terminal phosphate cyclase |
| * | NZ_CP009273 | 341,039 | 0 | C | A | 32.4% | 78.2 / 12.3 | 37 | intergenic (+337/‑76) | BW25113_RS01680/BW25113_RS01685 | hypothetical protein/hypothetical protein |