breseq  version 0.35.4  revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence position mutation annotation gene description
RA 50,280 T→C F153S (TTT→TCT)  folA → type 3 dihydrofolate reductase
MC JC 2,399,465 Δ7 bp coding (650‑656/939 nt) lrhA ← transcriptional regulator LrhA

Unassigned missing coverage evidence
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 80529 80628 100 2 [0] [1] 2 leuL/leuO leu operon leader peptide/transcriptional regulator LeuO
* * ÷ NZ_CP009273 83185 83208 24 3 [1] [1] 2 ilvI acetolactate synthase 3 large subunit
* * ÷ NZ_CP009273 93984 93996 13 2 [1] [1] 2 murD UDP‑N‑acetylmuramoyl‑L‑alanine‑‑D‑glutamate ligase
* * ÷ NZ_CP009273 153595 153671 77 2 [1] [1] 2 yadN/folK fimbrial protein/2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase
* * ÷ NZ_CP009273 172910 172937 28 2 [1] [1] 2 clcA H(+)/Cl(‑) exchange transporter ClcA
* * ÷ NZ_CP009273 192743 192773 31 2 [1] [1] 2 cdsA phosphatidate cytidylyltransferase
* * ÷ NZ_CP009273 194097 194193 97 4 [1] [1] 2 rseP sigma E protease regulator RseP
* * ÷ NZ_CP009273 218840 218849 10 2 [0] [0] 2 metN methionine ABC transporter ATP‑binding protein MetN
* * ÷ NZ_CP009273 227348 227432 85 2 [1] [1] 2 [yafC] [yafC]
* * ÷ NZ_CP009273 230566 230598 33 2 [1] [1] 2 gloB hydroxyacylglutathione hydrolase
* * ÷ NZ_CP009273 234590 234598 9 2 [1] [1] 2 BW25113_RS01090 lipoprotein
* * ÷ NZ_CP009273 237155 237155 1 2 [0] [0] 2 ivy Ivy family C‑type lysozyme inhibitor
* * ÷ NZ_CP009273 356981 357568 588 2 [0] [0] 3 lacA galactoside O‑acetyltransferase
* * ÷ NZ_CP009273 370573 370577 5 2 [1] [0] 2 dmpG/mhpT 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter
* * ÷ NZ_CP009273 399900 399920 21 2 [0] [1] 2 adrA diguanylate cyclase AdrA
* * ÷ NZ_CP009273 414641 414690 50 3 [1] [1] 3 phoR/brnQ phosphate regulon sensor histidine kinase PhoR/branched‑chain amino acid transporter carrier protein BrnQ
* * ÷ NZ_CP009273 433897 433954 58 4 [1] [0] 2 dxs 1‑deoxy‑D‑xylulose‑5‑phosphate synthase
* * ÷ NZ_CP009273 486598 486625 28 3 [1] [1] 2 ybaN DUF454 family protein
* * ÷ NZ_CP009273 495567 495612 46 2 [1] [1] 2 [gsk] [gsk]
* * ÷ NZ_CP009273 503123 503129 7 3 [0] [0] 2 ybaP TraB/GumN family protein
* * ÷ NZ_CP009273 514177 514197 21 2 [1] [1] 3 ybbO NADP(+)‑dependent aldehyde reductase
* * ÷ NZ_CP009273 515318 515318 1 2 [0] [0] 2 ybbA ABC transporter ATP‑binding protein
* * ÷ NZ_CP009273 518475 518541 67 2 [1] [1] 2 ybbP/rhsD ABC transporter permease/rhs element protein RhsD
* * ÷ NZ_CP009273 519023 519043 21 2 [1] [1] 2 rhsD rhs element protein RhsD
* * ÷ NZ_CP009273 523346 523397 52 2 [1] [1] 2 ybbC YbbC/YhhH family protein
* * ÷ NZ_CP009273 524126 524152 27 3 [0] [0] 2 BW25113_RS24960 hypothetical protein
* * ÷ NZ_CP009273 529755 529810 56 2 [1] [1] 3 gcl glyoxylate carboligase
* * ÷ NZ_CP009273 533342 533359 18 4 [1] [1] 2 ybbW putative allantoin permease
* * ÷ NZ_CP009273 552171 552198 28 2 [0] [1] 2 ybcJ ribosome‑associated protein YbcJ
* * ÷ NZ_CP009273 561270 561280 11 2 [1] [1] 3 intD site‑specific integrase
* * ÷ NZ_CP009273 565401 565465 65 2 [1] [1] 2 ybcK recombinase family protein
* * ÷ NZ_CP009273 576030 576059 30 2 [1] [0] 3 ylcI/nohD YlcI/YnfO family protein/DNA‑packaging protein
* * ÷ NZ_CP009273 578866 578874 9 2 [1] [0] 2 BW25113_RS26085/appY tail fiber assembly protein/DNA‑binding transcriptional activator AppY
* * ÷ NZ_CP009273 579107 579176 70 3 [1] [1] 2 [appY] [appY]
* * ÷ NZ_CP009273 579540 579672 133 2 [1] [1] 2 appY DNA‑binding transcriptional activator AppY
* * ÷ NZ_CP009273 613916 613955 40 2 [1] [1] 3 wzz(fepE) LPS O‑antigen length regulator Wzz(fepE)
* * ÷ NZ_CP009273 621509 621536 28 4 [0] [1] 2 [entC]–[entE] [entC],[entE]
* * ÷ NZ_CP009273 628813 628823 11 4 [1] [0] 5 hcxA hydroxycarboxylate dehydrogenase HcxA
* * ÷ NZ_CP009273 637003 637036 34 3 [0] [1] 3 uspG universal stress protein UspG
* * ÷ NZ_CP009273 637727 637751 25 2 [0] [1] 2 ybdR glutathione‑dependent formaldehyde dehydrogenase
* * ÷ NZ_CP009273 647522 647584 63 3 [1] [1] 2 citC/dpiB [citrate (pro‑3S)‑lyase] ligase/sensor histidine kinase DpiB
* * ÷ NZ_CP009273 651819 651888 70 2 [1] [1] 2 dcuC/pagP anaerobic C4‑dicarboxylate transporter DcuC/lipid IV(A) palmitoyltransferase PagP
* * ÷ NZ_CP009273 654501 654504 4 2 [0] [1] 2 tatE twin‑arginine translocase subunit TatE
* * ÷ NZ_CP009273 672023 672065 43 3 [1] [1] 2 ybeQ/ybeR SEL1‑like repeat protein/DUF1266 domain‑containing protein
* * ÷ NZ_CP009273 674912 674975 64 2 [1] [1] 5 [ybeU] [ybeU]
* * ÷ NZ_CP009273 675405 675412 8 3 [1] [0] 2 ybeU DUF1266 domain‑containing protein
* * ÷ NZ_CP009273 678662 678679 18 3 [1] [0] 2 hscC molecular chaperone HscC
* * ÷ NZ_CP009273 703464 703587 124 2 [1] [1] 2 glnS/chiP glutamine‑‑tRNA ligase/chitoporin
* * ÷ NZ_CP009273 712120 712138 19 2 [1] [1] 2 BW25113_RS03565/BW25113_RS03570 DUF2625 domain‑containing protein/winged helix‑turn‑helix domain‑containing protein
* * ÷ NZ_CP009273 716545 716610 66 2 [1] [0] 2 kdpE two‑component system response regulator KdpE
* * ÷ NZ_CP009273 718765 718786 22 2 [0] [1] 2 kdpD two‑component system sensor histidine kinase KdpD
* * ÷ NZ_CP009273 724868 724930 63 2 [1] [1] 2 ybfA/rhsC YbfA family protein/rhs element protein RhsC
* * ÷ NZ_CP009273 726184 726226 43 2 [1] [1] 2 rhsC rhs element protein RhsC
* * ÷ NZ_CP009273 729188 729266 79 4 [1] [1] 3 [rhsC]–[BW25113_RS03630] [rhsC],[BW25113_RS03630]
* * ÷ NZ_CP009273 732508 732518 11 2 [1] [0] 3 BW25113_RS03650 ISAs1 family transposase
* * ÷ NZ_CP009273 736640 736670 31 2 [1] [1] 3 dtpD dipeptide permease DtpD
* * ÷ NZ_CP009273 750104 750114 11 3 [0] [1] 2 gltA/BW25113_RS25495 citrate synthase/hypothetical protein
* * ÷ NZ_CP009273 758652 758658 7 2 [1] [1] 2 sucC ADP‑forming succinate‑‑CoA ligase subunit beta
* * ÷ NZ_CP009273 766511 766556 46 2 [1] [1] 2 mngB/cydA mannosylglycerate hydrolase/cytochrome ubiquinol oxidase subunit I
* * ÷ NZ_CP009273 784395 784438 44 4 [1] [1] 2 galK galactokinase
* * ÷ NZ_CP009273 785407 785442 36 3 [1] [0] 2 [galK]–[galT] [galK],[galT]
* * ÷ NZ_CP009273 786730 786740 11 2 [0] [1] 2 galE UDP‑glucose 4‑epimerase GalE
* * ÷ NZ_CP009273 806475 806492 18 2 [0] [0] 2 bioF 8‑amino‑7‑oxononanoate synthase
* * ÷ NZ_CP009273 807673 807710 38 3 [1] [1] 2 bioC malonyl‑ACP O‑methyltransferase BioC
* * ÷ NZ_CP009273 810925 810994 70 2 [1] [1] 2 uvrB excinuclease ABC subunit UvrB
* * ÷ NZ_CP009273 820489 820562 74 2 [1] [1] 2 ybhR ABC transporter permease
* * ÷ NZ_CP009273 822395 822437 43 3 [0] [0] 2 ybhS ABC transporter permease
* * ÷ NZ_CP009273 827485 827568 84 2 [0] [1] 2 rhlE ATP‑dependent RNA helicase RhlE
* * ÷ NZ_CP009273 832362 832400 39 2 [1] [0] 2 hcxB hydroxycarboxylate dehydrogenase HcXB
* * ÷ NZ_CP009273 847266 847281 16 3 [1] [0] 2 opgE phosphoethanolamine transferase
* * ÷ NZ_CP009273 852813 852891 79 2 [1] [1] 2 ybiT ABC‑F family ATPase
* * ÷ NZ_CP009273 853731 853784 54 2 [0] [1] 2 ybiU DUF1479 domain‑containing protein
* * ÷ NZ_CP009273 855962 855995 34 2 [1] [1] 3 ybiW glycyl radical protein
* * ÷ NZ_CP009273 856592 856659 68 2 [1] [1] 3 ybiW glycyl radical protein
* * ÷ NZ_CP009273 858296 858372 77 2 [1] [1] 2 ybiY glycyl‑radical enzyme activating protein
* * ÷ NZ_CP009273 859473 859544 72 2 [1] [1] 2 fsa fructose‑6‑phosphate aldolase
* * ÷ NZ_CP009273 867633 867655 23 2 [0] [1] 2 gsiD glutathione ABC transporter permease GsiD
* * ÷ NZ_CP009273 868764 868788 25 2 [1] [1] 2 pdeI EAL domain‑containing protein
* * ÷ NZ_CP009273 874438 874471 34 2 [1] [0] 2 yliI aldose sugar dehydrogenase YliI
* * ÷ NZ_CP009273 875610 875678 69 3 [1] [1] 2 gstB glutathione S‑transferase GstB
* * ÷ NZ_CP009273 876046 876197 152 2 [1] [1] 2 [dacC] [dacC]
* * ÷ NZ_CP009273 882251 882260 10 2 [0] [1] 2 ybjJ MFS transporter
* * ÷ NZ_CP009273 892501 892541 41 2 [1] [1] 2 potH putrescine ABC transporter permease PotH
* * ÷ NZ_CP009273 892733 892754 22 2 [1] [1] 3 potI putrescine ABC transporter permease PotI
* * ÷ NZ_CP009273 902960 903041 82 3 [1] [1] 2 ybjT SDR family oxidoreductase
* * ÷ NZ_CP009273 905090 905164 75 3 [1] [1] 2 poxB ubiquinone‑dependent pyruvate dehydrogenase
* * ÷ NZ_CP009273 909734 909758 25 2 [1] [1] 3 lysO L‑lysine exporter LysO
* * ÷ NZ_CP009273 916387 916475 89 2 [1] [1] 2 macB macrolide ABC transporter ATP‑binding protein/permease MacB
* * ÷ NZ_CP009273 925770 925831 62 2 [1] [0] 2 cydD cysteine/glutathione ABC transporter permease/ATP‑binding protein CydD
* * ÷ NZ_CP009273 930398 930419 22 2 [1] [0] 2 ftsK DNA translocase FtsK
* * ÷ NZ_CP009273 949157 949164 8 2 [1] [1] 2 focA formate transporter FocA
* * ÷ NZ_CP009273 964462 964523 62 3 [1] [1] 4 lpxK tetraacyldisaccharide 4'‑kinase
* * ÷ NZ_CP009273 965349 965393 45 3 [1] [1] 2 ycaQ winged helix DNA‑binding protein YcaQ
* * ÷ NZ_CP009273 970168 970234 67 2 [0] [1] 2 mukF chromosome partition protein MukF
* * ÷ NZ_CP009273 971952 971975 24 2 [1] [1] 2 mukB chromosome partition protein MukB
* * ÷ NZ_CP009273 987849 987948 100 2 [1] [1] 3 pepN aminopeptidase N
* * ÷ NZ_CP009273 993111 993270 160 2 [0] [1] 2 ssuE/elfA NADPH‑dependent FMN reductase/fimbrial protein
* * ÷ NZ_CP009273 993831 993897 67 2 [1] [1] 2 [elfA] [elfA]
* * ÷ NZ_CP009273 1001640 1001688 49 2 [1] [1] 2 zapC cell division protein ZapC
* * ÷ NZ_CP009273 1001998 1002057 60 2 [1] [1] 2 ycbX 6‑N‑hydroxylaminopurine resistance protein YcbX
* * ÷ NZ_CP009273 1011044 1011102 59 2 [1] [1] 2 pqiC/rmf membrane integrity‑associated transporter subunit PqiC/ribosome modulation factor
* * ÷ NZ_CP009273 1014223 1014284 62 2 [1] [1] 2 matP macrodomain Ter protein MatP
* * ÷ NZ_CP009273 1023292 1023312 21 2 [1] [1] 3 yccT/yccU DUF2057 family protein/CoA‑binding protein
* * ÷ NZ_CP009273 1030993 1031008 16 2 [1] [1] 2 hyaC Ni/Fe‑hydrogenase b‑type cytochrome subunit
* * ÷ NZ_CP009273 1032553 1032598 46 2 [1] [1] 2 hyaF hydrogenase expression/formation protein
* * ÷ NZ_CP009273 1037161 1037214 54 4 [0] [1] 2 appA bifunctional acid phosphatase/4‑phytase
* * ÷ NZ_CP009273 1047718 1047731 14 2 [1] [1] 3 gnsA/yccM addiction module toxin, GnsA/GnsB family/4Fe‑4S binding protein
* * ÷ NZ_CP009273 1055457 1055467 11 3 [1] [0] 2 torA trimethylamine‑N‑oxide reductase TorA
* * ÷ NZ_CP009273 1055757 1055841 85 2 [1] [1] 2 torA trimethylamine‑N‑oxide reductase TorA
* * ÷ NZ_CP009273 1059291 1059294 4 3 [0] [0] 3 cbpA/yccE curved DNA‑binding protein/YccE family protein
* * ÷ NZ_CP009273 1059489 1059534 46 2 [1] [1] 2 [yccE] [yccE]
* * ÷ NZ_CP009273 1061731 1061753 23 2 [1] [1] 2 agp bifunctional glucose‑1‑phosphatase/inositol phosphatase
* * ÷ NZ_CP009273 1074235 1074262 28 2 [1] [1] 2 putA trifunctional transcriptional regulator/proline dehydrogenase/L‑glutamate gamma‑semialdehyde dehydrogenase
* * ÷ NZ_CP009273 1085169 1085172 4 2 [0] [0] 2 pgaB poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine N‑deacetylase PgaB
* * ÷ NZ_CP009273 1087932 1087975 44 2 [0] [1] 2 pgaA/dgcT poly‑beta‑1,6 N‑acetyl‑D‑glucosamine export porin PgaA/GGDEF domain‑containing protein
* * ÷ NZ_CP009273 1088516 1088581 66 2 [1] [1] 2 dgcT GGDEF domain‑containing protein
* * ÷ NZ_CP009273 1097683 1097710 28 2 [1] [1] 2 csgE curli production assembly/transport protein CsgE
* * ÷ NZ_CP009273 1098738 1098795 58 2 [1] [1] 2 csgD/csgB biofilm master transcriptional regulator CsgD/curli minor subunit CsgB
* * ÷ NZ_CP009273 1098970 1099018 49 2 [0] [1] 2 csgD/csgB biofilm master transcriptional regulator CsgD/curli minor subunit CsgB
* * ÷ NZ_CP009273 1106380 1106427 48 3 [1] [1] 2 mdoH glucans biosynthesis glucosyltransferase MdoH
* * ÷ NZ_CP009273 1107267 1107294 28 2 [1] [1] 2 mdoH glucans biosynthesis glucosyltransferase MdoH
* * ÷ NZ_CP009273 1112832 1112840 9 2 [0] [1] 3 trhO rhodanese‑related sulfurtransferase
* * ÷ NZ_CP009273 1114540 1114564 25 2 [0] [1] 2 yceJ/BW25113_RS05515 cytochrome b/YceO family protein
* * ÷ NZ_CP009273 1116498 1116537 40 2 [1] [1] 2 bssS/dinI biofilm formation regulator BssS/DNA damage‑inducible protein I
* * ÷ NZ_CP009273 1122286 1122359 74 2 [1] [1] 2 yceM Gfo/Idh/MocA family oxidoreductase
* * ÷ NZ_CP009273 1128071 1128149 79 2 [1] [1] 2 flgE flagellar hook protein FlgE
* * ÷ NZ_CP009273 1132690 1132773 84 2 [1] [1] 2 flgI flagellar basal body P‑ring protein FlgI
* * ÷ NZ_CP009273 1136495 1136588 94 2 [1] [1] 2 flgL/rne flagellar hook‑associated protein FlgL/ribonuclease E
* * ÷ NZ_CP009273 1137034 1137084 51 2 [0] [1] 2 rne ribonuclease E
* * ÷ NZ_CP009273 1137938 1137991 54 2 [1] [1] 3 rne ribonuclease E
* * ÷ NZ_CP009273 1140594 1140668 75 2 [0] [1] 2 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC
* * ÷ NZ_CP009273 1140832 1140860 29 2 [1] [1] 2 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC
* * ÷ NZ_CP009273 1141838 1141846 9 2 [1] [1] 2 yceF 7‑methyl‑GTP pyrophosphatase
* * ÷ NZ_CP009273 1150360 1150394 35 2 [1] [1] 2 yceG cell division protein YceG
* * ÷ NZ_CP009273 1152494 1152532 39 2 [1] [0] 2 ycfH metal‑dependent hydrolase
* * ÷ NZ_CP009273 1155480 1155509 30 2 [1] [1] 2 fhuE ferric‑rhodotorulic acid/ferric‑coprogen receptor FhuE
* * ÷ NZ_CP009273 1156389 1156410 22 2 [1] [0] 2 fhuE ferric‑rhodotorulic acid/ferric‑coprogen receptor FhuE
* * ÷ NZ_CP009273 1164836 1164897 62 2 [1] [1] 2 [ldtC] [ldtC]
* * ÷ NZ_CP009273 1165846 1165869 24 2 [1] [1] 2 ldtC/mfd L,D‑transpeptidase LdtC/transcription‑repair coupling factor
* * ÷ NZ_CP009273 1166381 1166467 87 2 [1] [1] 2 mfd transcription‑repair coupling factor
* * ÷ NZ_CP009273 1168216 1168274 59 2 [1] [0] 2 mfd transcription‑repair coupling factor
* * ÷ NZ_CP009273 1187313 1187359 47 2 [1] [1] 2 purB adenylosuccinate lyase
* * ÷ NZ_CP009273 1189827 1189886 60 2 [1] [1] 2 rluE 23S rRNA pseudouridine(2457) synthase RluE
* * ÷ NZ_CP009273 1192330 1192392 63 2 [1] [1] 2 ymfD class I SAM‑dependent methyltransferase
* * ÷ NZ_CP009273 1192989 1193041 53 2 [0] [1] 2 BW25113_RS05920 hypothetical protein
* * ÷ NZ_CP009273 1193703 1193723 21 4 [1] [1] 2 BW25113_RS05920/lit hypothetical protein/cell death peptidase Lit
* * ÷ NZ_CP009273 1202386 1202433 48 2 [1] [1] 4 ymfQ YmfQ family protein
* * ÷ NZ_CP009273 1203156 1203195 40 2 [1] [1] 2 BW25113_RS05990 hypothetical protein
* * ÷ NZ_CP009273 1207479 1207620 142 2 [1] [1] 2 iraM/BW25113_RS25985 anti‑adapter protein IraM/protein YmgK
* * ÷ NZ_CP009273 1207726 1207771 46 2 [0] [1] 3 [BW25113_RS25985] [BW25113_RS25985]
* * ÷ NZ_CP009273 1208076 1208103 28 2 [1] [0] 2 BW25113_RS25535 hypothetical protein
* * ÷ NZ_CP009273 1209631 1209692 62 2 [1] [1] 2 bluR/bluF DNA‑binding transcriptional repressor BluR/blue light‑responsive regulator BluF
* * ÷ NZ_CP009273 1211726 1211921 196 2 [1] [1] 2 [ymgA]–[ariR] [ymgA],[ariR]
* * ÷ NZ_CP009273 1214902 1214965 64 2 [1] [1] 2 BW25113_RS06070/BW25113_RS25990 hypothetical protein/autotransporter outer membrane beta‑barrel domain‑containing protein
* * ÷ NZ_CP009273 1218043 1218124 82 2 [1] [1] 2 [ymgD]–[ymgG] [ymgD],[ymgG]
* * ÷ NZ_CP009273 1220725 1220768 44 2 [1] [1] 2 minD septum site‑determining protein MinD
* * ÷ NZ_CP009273 1223190 1223217 28 2 [1] [1] 4 BW25113_RS06140 YcgL domain‑containing protein
* * ÷ NZ_CP009273 1225696 1225932 237 3 [1] [0] 2 [hlyE] [hlyE]
* * ÷ NZ_CP009273 1230342 1230344 3 3 [0] [1] 3 nhaB/fadR Na(+)/H(+) antiporter NhaB/fatty acid metabolism transcriptional regulator FadR
* * ÷ NZ_CP009273 1233381 1233423 43 2 [1] [1] 2 dadA D‑amino acid dehydrogenase
* * ÷ NZ_CP009273 1236244 1236272 29 2 [0] [1] 2 cvrA potassium/proton antiporter
* * ÷ NZ_CP009273 1240706 1240755 50 2 [1] [1] 3 BW25113_RS06225 hypothetical protein
* * ÷ NZ_CP009273 1244543 1244557 15 3 [1] [0] 2 dhaM dihydroxyacetone kinase phosphoryl donor subunit DhaM
* * ÷ NZ_CP009273 1245435 1245453 19 2 [0] [1] 3 dhaK dihydroxyacetone kinase subunit DhaK
* * ÷ NZ_CP009273 1246423 1246476 54 2 [1] [1] 2 dhaK/dhaR dihydroxyacetone kinase subunit DhaK/dihydroxyacetone kinase operon transcriptional regulator DhaR
* * ÷ NZ_CP009273 1246879 1246913 35 2 [1] [0] 2 dhaR dihydroxyacetone kinase operon transcriptional regulator DhaR
* * ÷ NZ_CP009273 1247004 1247077 74 3 [1] [1] 2 dhaR dihydroxyacetone kinase operon transcriptional regulator DhaR
* * ÷ NZ_CP009273 1252612 1252622 11 2 [0] [0] 3 ychF redox‑regulated ATPase YchF
* * ÷ NZ_CP009273 1253280 1253318 39 3 [1] [1] 3 ychF/pth redox‑regulated ATPase YchF/aminoacyl‑tRNA hydrolase
* * ÷ NZ_CP009273 1253633 1253683 51 2 [1] [0] 2 pth aminoacyl‑tRNA hydrolase
* * ÷ NZ_CP009273 1253868 1253895 28 3 [1] [1] 2 pth aminoacyl‑tRNA hydrolase
* * ÷ NZ_CP009273 1255210 1255275 66 2 [1] [1] 2 dauA C4‑dicarboxylic acid transporter DauA
* * ÷ NZ_CP009273 1257707 1257801 95 3 [1] [1] 3 ispE 4‑(cytidine 5'‑diphospho)‑2‑C‑methyl‑D‑erythritol kinase
* * ÷ NZ_CP009273 1267641 1267744 104 2 [1] [1] 2 chaB putative cation transport regulator ChaB
* * ÷ NZ_CP009273 1273481 1273570 90 2 [1] [0] 2 narK nitrate transporter NarK
* * ÷ NZ_CP009273 1274364 1274433 70 2 [1] [1] 2 narK nitrate transporter NarK
* * ÷ NZ_CP009273 1279593 1279625 33 2 [1] [1] 2 narH nitrate reductase subunit beta
* * ÷ NZ_CP009273 1282184 1282241–1282212 29–58 2 [0] [1] 2 BW25113_RS23085 RtT sRNA
* * ÷ NZ_CP009273 1284842 1284856 15 2 [1] [1] 3 rssA patatin‑like phospholipase RssA
* * ÷ NZ_CP009273 1287089 1287098 10 3 [0] [1] 2 galU UTP‑‑glucose‑1‑phosphate uridylyltransferase GalU
* * ÷ NZ_CP009273 1296615 1296617 3 2 [1] [0] 4 oppA oligopeptide ABC transporter substrate‑binding protein OppA
* * ÷ NZ_CP009273 1304540 1304568 29 3 [1] [0] 2 kch/yciI voltage‑gated potassium channel protein/YciI family protein
* * ÷ NZ_CP009273 1304978 1305041 64 2 [1] [1] 2 yciI YciI family protein
* * ÷ NZ_CP009273 1305529 1305575 47 2 [1] [1] 2 tonB TonB system transport protein TonB
* * ÷ NZ_CP009273 1314650 1314666 17 2 [1] [0] 2 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD
* * ÷ NZ_CP009273 1319090 1319148 59 2 [1] [0] 2 yciQ DUF2207 domain‑containing protein
* * ÷ NZ_CP009273 1319329 1319374 46 3 [1] [0] 2 yciQ DUF2207 domain‑containing protein
* * ÷ NZ_CP009273 1319809 1319884 76 3 [1] [1] 3 yciQ DUF2207 domain‑containing protein
* * ÷ NZ_CP009273 1326941 1327055 115 2 [1] [1] 2 topA type I DNA topoisomerase
* * ÷ NZ_CP009273 1327164 1327211 48 2 [1] [1] 4 topA type I DNA topoisomerase
* * ÷ NZ_CP009273 1333930 1333937 8 2 [0] [0] 2 pgpB phosphatidylglycerophosphatase B
* * ÷ NZ_CP009273 1334046 1334126 81 2 [1] [0] 2 pgpB phosphatidylglycerophosphatase B
* * ÷ NZ_CP009273 1334217 1334236 20 2 [0] [1] 2 pgpB phosphatidylglycerophosphatase B
* * ÷ NZ_CP009273 1334479 1334490 12 2 [1] [1] 2 pgpB/lapA phosphatidylglycerophosphatase B/lipopolysaccharide assembly protein LapA
* * ÷ NZ_CP009273 1335118 1335139 22 2 [0] [1] 3 lapB lipopolysaccharide assembly protein LapB
* * ÷ NZ_CP009273 1350712 1350750 39 2 [0] [1] 2 sapA peptide ABC transporter substrate‑binding protein SapA
* * ÷ NZ_CP009273 1351145 1351176 32 2 [0] [1] 4 sapA peptide ABC transporter substrate‑binding protein SapA
* * ÷ NZ_CP009273 1353934 1353975 42 2 [1] [1] 2 puuA glutamate‑putrescine ligase
* * ÷ NZ_CP009273 1357808 1357869 62 2 [1] [1] 2 puuC aldehyde dehydrogenase PuuC
* * ÷ NZ_CP009273 1362603 1362679 77 2 [1] [1] 2 pspA phage shock protein PspA
* * ÷ NZ_CP009273 1366215 1366255 41 2 [0] [1] 2 ycjN ABC transporter substrate‑binding protein
* * ÷ NZ_CP009273 1371377 1371463 87 3 [1] [1] 3 ycjS Gfo/Idh/MocA family oxidoreductase
* * ÷ NZ_CP009273 1376553 1376563 11 3 [1] [0] 2 ompG monomeric porin OmpG
* * ÷ NZ_CP009273 1378817 1378826 10 3 [1] [0] 2 ycjX YcjX family protein
* * ÷ NZ_CP009273 1380027 1380031 5 2 [0] [0] 2 ycjF YcjF family protein
* * ÷ NZ_CP009273 1388687 1388705 19 2 [0] [1] 2 mppA murein tripeptide ABC transporter substrate‑binding protein MppA
* * ÷ NZ_CP009273 1395795 1395804 10 2 [0] [1] 2 abgT p‑aminobenzoyl‑glutamate transporter
* * ÷ NZ_CP009273 1397396 1397484 89 2 [0] [1] 2 abgB p‑aminobenzoyl‑glutamate hydrolase subunit AbgB
* * ÷ NZ_CP009273 1397615 1397642 28 2 [0] [1] 2 abgA p‑aminobenzoyl‑glutamate hydrolase subunit AbgA
* * ÷ NZ_CP009273 1399829 1399868 40 2 [1] [1] 2 abgR LysR family transcriptional regulator
* * ÷ NZ_CP009273 1403987 1404009 23 2 [1] [1] 2 dbpA ATP‑dependent RNA helicase DbpA
* * ÷ NZ_CP009273 1412125 1412244 120 2 [1] [1] 5 BW25113_RS07100 conserved protein, Rac prophage
* * ÷ NZ_CP009273 1415343 1415358 16 3 [1] [0] 2 ydaT toxin YdaT family protein
* * ÷ NZ_CP009273 1417252 1417311 60 2 [1] [1] 2 BW25113_RS07140 DUF1627 domain‑containing protein
* * ÷ NZ_CP009273 1417976 1418080 105 3 [1] [1] 2 [trkG] [trkG]
* * ÷ NZ_CP009273 1418176 1418268 93 3 [1] [1] 2 trkG Trk system potassium transporter TrkG
* * ÷ NZ_CP009273 1421035 1421044 10 2 [1] [1] 2 ynaA phage tail length tape measure family protein
* * ÷ NZ_CP009273 1422204 1422284–1422272 69–81 4 [1] [1] 2 BW25113_RS07180 IS5‑like element ISKpn26 family transposase
* * ÷ NZ_CP009273 1422619 1422698 80 2 [1] [1] 2 BW25113_RS07180 IS5‑like element ISKpn26 family transposase
* * ÷ NZ_CP009273 1424122 1424150 29 2 [0] [1] 2 stfR prophage tail fiber N‑terminal domain‑containing protein
* * ÷ NZ_CP009273 1424239 1424248 10 2 [1] [1] 2 stfR prophage tail fiber N‑terminal domain‑containing protein
* * ÷ NZ_CP009273 1424495 1424563 69 2 [1] [0] 2 stfR prophage tail fiber N‑terminal domain‑containing protein
* * ÷ NZ_CP009273 1425752 1425776 25 2 [1] [0] 3 stfR prophage tail fiber N‑terminal domain‑containing protein
* * ÷ NZ_CP009273 1427995–1428256 1428324 69–330 2 [1] [1] 2 [ydfK] [ydfK]
* * ÷ NZ_CP009273 1428658 1428673 16 3 [1] [1] 2 [BW25113_RS25575] [BW25113_RS25575]
* * ÷ NZ_CP009273 1428854 1428878 25 2 [1] [1] 2 BW25113_RS25575/uspF hypothetical protein/universal stress protein UspF
* * ÷ NZ_CP009273 1429961 1430002 42 3 [1] [1] 2 uspF/ompN universal stress protein UspF/porin OmpN
* * ÷ NZ_CP009273 1430308 1430340 33 2 [1] [0] 2 ompN porin OmpN
* * ÷ NZ_CP009273 1431229 1431284 56 2 [1] [1] 2 ompN/nifJ porin OmpN/pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1431500 1431510 11 2 [0] [0] 2 ompN/nifJ porin OmpN/pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1433082 1433083 2 2 [1] [0] 2 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1437304 1437322 19 4 [1] [1] 2 [ydbH] [ydbH]
* * ÷ NZ_CP009273 1441397 1441443 47 2 [1] [1] 2 feaR transcriptional regulator FeaR
* * ÷ NZ_CP009273 1451698 1451761 64 2 [1] [1] 2 [paaK]–[paaF] [paaK],[paaF]
* * ÷ NZ_CP009273 1455941 1455982 42 2 [1] [1] 2 paaJ bifunctional 3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase
* * ÷ NZ_CP009273 1459491 1459517 27 2 [1] [0] 2 BW25113_RS25580/BW25113_RS07350 hypothetical protein/autotransporter domain‑containing protein
* * ÷ NZ_CP009273 1468380 1468407 28 2 [1] [0] 2 BW25113_RS07370/pdxI autotransporter domain‑containing protein/pyridoxine 4‑dehydrogenase
* * ÷ NZ_CP009273 1468455 1468467 13 2 [0] [1] 3 BW25113_RS07370/pdxI autotransporter domain‑containing protein/pyridoxine 4‑dehydrogenase
* * ÷ NZ_CP009273 1470585 1470599 15 2 [1] [1] 2 ydbD DUF2773 domain‑containing bactofilin
* * ÷ NZ_CP009273 1471083 1471116 34 2 [1] [1] 2 ydbD DUF2773 domain‑containing bactofilin
* * ÷ NZ_CP009273 1474657 1474662 6 3 [0] [0] 2 ynbC bifunctional alpha/beta hydrolase/class I SAM‑dependent methyltransferase
* * ÷ NZ_CP009273 1475666 1475712 47 2 [1] [1] 2 ynbD phosphatase PAP2/dual specificity phosphatase family protein
* * ÷ NZ_CP009273 1477244 1477264 21 2 [1] [0] 2 azoR/hrpA FMN‑dependent NADH‑azoreductase/ATP‑dependent RNA helicase HrpA
* * ÷ NZ_CP009273 1479678 1479711 34 2 [0] [1] 3 hrpA ATP‑dependent RNA helicase HrpA
* * ÷ NZ_CP009273 1479900 1479942 43 2 [1] [1] 2 hrpA ATP‑dependent RNA helicase HrpA
* * ÷ NZ_CP009273 1485849 1485885 37 2 [1] [1] 2 cybB/BW25113_RS07445 cytochrome b561/periplasmic protein
* * ÷ NZ_CP009273 1487886 1487950 65 2 [1] [1] 2 trg methyl‑accepting chemotaxis protein Trg
* * ÷ NZ_CP009273 1490764 1490779 16 2 [1] [0] 3 ydcJ VOC family protein
* * ÷ NZ_CP009273 1491374 1491395 22 2 [1] [0] 2 opgD glucan biosynthesis protein OpgD
* * ÷ NZ_CP009273 1491496 1491546 51 2 [1] [1] 2 opgD glucan biosynthesis protein OpgD
* * ÷ NZ_CP009273 1511476 1511486 11 3 [0] [1] 2 yncL/ortT stress response membrane protein YncL/orphan toxin OrtT
* * ÷ NZ_CP009273 1512111 1512137 27 2 [1] [1] 2 ydcY YdcY family protein
* * ÷ NZ_CP009273 1517231 1517283 53 2 [1] [1] 3 yncD TonB‑dependent receptor
* * ÷ NZ_CP009273 1520181 1520228 48 3 [1] [1] 2 ansP L‑asparagine permease
* * ÷ NZ_CP009273 1521427 1521615 189 2 [1] [1] 2 yncH/BW25113_RS07645 YncH family protein/RHS repeat protein
* * ÷ NZ_CP009273 1524194 1524329 136 3 [1] [1] 2 [BW25113_RS07645] [BW25113_RS07645]
* * ÷ NZ_CP009273 1524589 1524809 221 3 [1] [1] 2 [BW25113_RS26145]–[BW25113_RS25600] [BW25113_RS26145],[BW25113_RS25600]
* * ÷ NZ_CP009273 1525218 1525228 11 4 [1] [1] 3 BW25113_RS07655 ISAs1 family transposase
* * ÷ NZ_CP009273 1533381 1533399 19 2 [1] [1] 3 narZ nitrate reductase Z subunit alpha
* * ÷ NZ_CP009273 1534888 1534938 51 2 [1] [1] 2 narZ nitrate reductase Z subunit alpha
* * ÷ NZ_CP009273 1535657 1535680 24 2 [0] [1] 2 narZ nitrate reductase Z subunit alpha
* * ÷ NZ_CP009273 1539126 1539192 67 2 [0] [1] 3 BW25113_RS07710 leucine‑rich repeat domain‑containing protein
* * ÷ NZ_CP009273 1540301 1540620 320 2 [1] [1] 2 [yddG] [yddG]
* * ÷ NZ_CP009273 1547430 1547454 25 2 [1] [0] 2 adhP alcohol dehydrogenase AdhP
* * ÷ NZ_CP009273 1551191 1551195 5 2 [0] [0] 2 osmC peroxiredoxin OsmC
* * ÷ NZ_CP009273 1556016 1556034 19 2 [1] [1] 2 ddpA ABC transporter substrate‑binding protein
* * ÷ NZ_CP009273 1557417 1557441 25 3 [1] [1] 2 ddpX/dosP D‑alanyl‑D‑alanine dipeptidase/oxygen‑sensing cyclic‑di‑GMP phosphodiesterase
* * ÷ NZ_CP009273 1559189 1559249 61 2 [1] [1] 3 dosP oxygen‑sensing cyclic‑di‑GMP phosphodiesterase
* * ÷ NZ_CP009273 1559720 1559744 25 2 [1] [1] 2 dosP oxygen‑sensing cyclic‑di‑GMP phosphodiesterase
* * ÷ NZ_CP009273 1560961 1560974 14 2 [1] [1] 2 dosC diguanylate cyclase DosC
* * ÷ NZ_CP009273 1566365 1566419 55 2 [1] [1] 2 gadB/pqqL glutamate decarboxylase/insulinase family protein
* * ÷ NZ_CP009273 1566565 1566640 76 2 [1] [1] 2 gadB/pqqL glutamate decarboxylase/insulinase family protein
* * ÷ NZ_CP009273 1575027 1575056 30 2 [1] [0] 2 [ydeM] [ydeM]
* * ÷ NZ_CP009273 1577026 1577124 99 2 [1] [1] 4 ydeN/ydeO sulfatase/acid stress response transcriptional regulator YdeO
* * ÷ NZ_CP009273 1577883 1578005 123 3 [1] [1] 2 [ydeO] [ydeO]
* * ÷ NZ_CP009273 1580845 1580977 133 2 [1] [1] 2 ydeP/ydeQ acid resistance putative oxidoreductase YdeP/fimbrial protein
* * ÷ NZ_CP009273 1589673 1589693 21 2 [1] [0] 2 BW25113_RS07915 ECSE_1600 family autotransporter
* * ÷ NZ_CP009273 1591392 1591512 121 2 [1] [1] 2 BW25113_RS07915 ECSE_1600 family autotransporter
* * ÷ NZ_CP009273 1591603 1591652 50 2 [1] [1] 2 BW25113_RS07915 ECSE_1600 family autotransporter
* * ÷ NZ_CP009273 1592515 1592619 105 2 [1] [1] 3 BW25113_RS07915/lsrK ECSE_1600 family autotransporter/autoinducer‑2 kinase
* * ÷ NZ_CP009273 1592704 1592714 11 2 [0] [1] 3 BW25113_RS07915/lsrK ECSE_1600 family autotransporter/autoinducer‑2 kinase
* * ÷ NZ_CP009273 1593442 1593451 10 2 [0] [0] 2 lsrK autoinducer‑2 kinase
* * ÷ NZ_CP009273 1608028 1608068 41 2 [1] [1] 2 sad succinate‑semialdehyde dehydrogenase
* * ÷ NZ_CP009273 1608159 1608184 26 2 [1] [0] 2 sad succinate‑semialdehyde dehydrogenase
* * ÷ NZ_CP009273 1612536 1612563 28 2 [1] [1] 2 marC NAAT family transporter MarC
* * ÷ NZ_CP009273 1615600 1615648 49 2 [0] [1] 2 ydeE efflux MFS transporter YdeE
* * ÷ NZ_CP009273 1617445 1617463 19 2 [0] [1] 2 dgcZ diguanylate cyclase DgcZ
* * ÷ NZ_CP009273 1618424 1618493 70 3 [0] [1] 2 ydeI YdeI family stress tolerance OB fold protein
* * ÷ NZ_CP009273 1618892 1618994 103 3 [1] [1] 2 ydeI/ydeJ YdeI family stress tolerance OB fold protein/2‑oxo‑tetronate isomerase
* * ÷ NZ_CP009273 1623108 1623118 11 3 [0] [1] 2 ydfH DNA‑binding transcriptional regulator rspR
* * ÷ NZ_CP009273 1624700 1624753 54 2 [1] [1] 2 ydfI mannitol dehydrogenase family protein
* * ÷ NZ_CP009273 1630164–1630336 1630387 52–224 2 [1] [1] 2 nohA DNA‑packaging protein
* * ÷ NZ_CP009273 1630833 1630858 26 2 [1] [0] 2 nohA/ynfO DNA‑packaging protein/YlcI/YnfO family protein
* * ÷ NZ_CP009273 1631276 1631341 66 3 [1] [1] 2 [ydfO] [ydfO]
* * ÷ NZ_CP009273 1631937 1632095 159 2 [1] [1] 2 [gnsB] [gnsB]
* * ÷ NZ_CP009273 1632817 1632825 9 3 [1] [0] 2 cspI cold shock protein CspI
* * ÷ NZ_CP009273 1634320 1634339 20 2 [1] [0] 2 ydfR YdfR family protein
* * ÷ NZ_CP009273 1635283 1635354 72 2 [1] [1] 2 ynfU/cspB putative zinc‑binding protein YnfU/cold shock‑like protein CspB
* * ÷ NZ_CP009273 1639207 1639214 8 2 [0] [0] 2 BW25113_RS08190/hokD hypothetical protein/type I toxin‑antitoxin system toxin HokD
* * ÷ NZ_CP009273 1640684 1640759 76 2 [1] [1] 2 flxA FlxA‑like family protein
* * ÷ NZ_CP009273 1646199 1646269 71 2 [1] [1] 2 BW25113_RS25635 tyrosine‑type recombinase/integrase
* * ÷ NZ_CP009273 1646946 1646991 46 3 [1] [1] 2 [BW25113_RS25635] [BW25113_RS25635]
* * ÷ NZ_CP009273 1652402 1652439 38 2 [0] [1] 2 ynfE dimethyl sulfoxide reductase subunit A
* * ÷ NZ_CP009273 1657293 1657299 7 2 [0] [1] 3 dmsB dimethylsulfoxide reductase subunit B
* * ÷ NZ_CP009273 1662829 1662871 43 2 [1] [1] 2 mlc/ynfL DNA‑binding transcriptional repressor Mlc/LysR family transcriptional regulator
* * ÷ NZ_CP009273 1663686 1663783 98 2 [1] [1] 2 ynfL LysR family transcriptional regulator
* * ÷ NZ_CP009273 1665844 1665897 54 2 [1] [1] 2 asr acid resistance repetitive basic protein Asr
* * ÷ NZ_CP009273 1668153 1668233 81 2 [1] [1] 3 [tqsA] [tqsA]
* * ÷ NZ_CP009273 1671381 1671413 33 2 [1] [1] 2 pntA Re/Si‑specific NAD(P)(+) transhydrogenase subunit alpha
* * ÷ NZ_CP009273 1674296 1674328 33 2 [0] [1] 3 ydgI amino acid permease
* * ÷ NZ_CP009273 1677505 1677541 37 2 [0] [1] 2 rstB two‑component system sensor histidine kinase RstB
* * ÷ NZ_CP009273 1677947 1677992 46 3 [1] [1] 2 rstB two‑component system sensor histidine kinase RstB
* * ÷ NZ_CP009273 1684670 1684765 96 2 [1] [1] 4 ydgA YdgA family protein
* * ÷ NZ_CP009273 1690678 1690714 37 2 [1] [1] 2 uidA/uidR beta‑glucuronidase/DNA‑binding transcriptional regulator UidR
* * ÷ NZ_CP009273 1690938 1691037 100 2 [1] [1] 4 uidR DNA‑binding transcriptional regulator UidR
* * ÷ NZ_CP009273 1693299 1693382 84 2 [1] [1] 5 malI mal regulon transcriptional regulator MalI
* * ÷ NZ_CP009273 1699160 1699176 17 3 [1] [1] 2 blr/ydgT division septum protein Blr/transcription modulator YdgT
* * ÷ NZ_CP009273 1700770 1700823 54 2 [1] [1] 2 rsxB electron transport complex subunit RsxB
* * ÷ NZ_CP009273 1712105 1712119 15 4 [1] [1] 4 pdxH pyridoxamine 5'‑phosphate oxidase
* * ÷ NZ_CP009273 1712902 1712954 53 2 [1] [1] 2 anmK anhydro‑N‑acetylmuramic acid kinase
* * ÷ NZ_CP009273 1715132 1715235 104 3 [1] [1] 2 slyA/ydhI transcriptional regulator SlyA/DUF1656 domain‑containing protein
* * ÷ NZ_CP009273 1725217 1725244 28 2 [1] [1] 2 lhr ATP‑dependent helicase
* * ÷ NZ_CP009273 1728250 1728251 2 2 [0] [0] 3 grxD monothiol glutaredoxin 4
* * ÷ NZ_CP009273 1728496 1728527 32 2 [1] [1] 2 grxD/mepH monothiol glutaredoxin 4/peptidoglycan DD‑endopeptidase MepH
* * ÷ NZ_CP009273 1731055 1731137 83 2 [1] [1] 2 ydhP MFS transporter
* * ÷ NZ_CP009273 1742902 1742968 67 2 [1] [1] 2 ydhS FAD‑NAD(P)‑binding protein
* * ÷ NZ_CP009273 1751433 1751479 47 3 [1] [1] 2 pykF/lpp pyruvate kinase PykF/murein lipoprotein Lpp
* * ÷ NZ_CP009273 1756846 1756907 62 2 [1] [1] 2 sufB Fe‑S cluster assembly protein SufB
* * ÷ NZ_CP009273 1757739 1757743 5 2 [1] [1] 2 sufB Fe‑S cluster assembly protein SufB
* * ÷ NZ_CP009273 1759094 1759143 50 2 [1] [1] 2 sufA/ydiH Fe‑S cluster assembly scaffold SufA/YdiH family protein
* * ÷ NZ_CP009273 1763665 1763705 41 3 [0] [1] 2 ydiK AI‑2E family transporter YdiK
* * ÷ NZ_CP009273 1772947 1773022 76 2 [1] [1] 2 ydiP AraC family transcriptional regulator
* * ÷ NZ_CP009273 1776642 1776701 60 2 [1] [1] 3 ydiS FAD‑dependent oxidoreductase
* * ÷ NZ_CP009273 1779331 1779361 31 4 [0] [1] 2 ppsA phosphoenolpyruvate synthase
* * ÷ NZ_CP009273 1781619 1781642 24 2 [1] [0] 2 ppsA/ppsR phosphoenolpyruvate synthase/posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR
* * ÷ NZ_CP009273 1783334 1783358 25 2 [1] [1] 3 aroH 3‑deoxy‑7‑phosphoheptulonate synthase AroH
* * ÷ NZ_CP009273 1789811 1789832 22 2 [1] [1] 2 [pheT] [pheT]
* * ÷ NZ_CP009273 1793044 1793088 45 2 [1] [1] 2 pheS phenylalanine‑‑tRNA ligase subunit alpha
* * ÷ NZ_CP009273 1799011 1799042 32 2 [1] [1] 7 espL1 type III secretion system effector EspL1
* * ÷ NZ_CP009273 1800424 1800568 145 2 [1] [1] 2 ydiY/pfkB YdiY family protein/6‑phosphofructokinase II
* * ÷ NZ_CP009273 1802423 1802474 52 2 [1] [1] 2 yniA fructosamine kinase family protein
* * ÷ NZ_CP009273 1807064 1807081 18 3 [1] [0] 2 BW25113_RS09050 hypothetical protein
* * ÷ NZ_CP009273 1807357 1807454 98 2 [1] [1] 2 [BW25113_RS09050] [BW25113_RS09050]
* * ÷ NZ_CP009273 1815455 1815524 70 2 [0] [1] 2 [chbC] [chbC]
* * ÷ NZ_CP009273 1822855 1822897 43 2 [1] [1] 2 astD succinylglutamate‑semialdehyde dehydrogenase
* * ÷ NZ_CP009273 1827898 1827910 13 2 [0] [1] 3 ydjX TVP38/TMEM64 family protein
* * ÷ NZ_CP009273 1832808 1832808 1 4 [0] [0] 2 ynjC ABC transporter permease subunit
* * ÷ NZ_CP009273 1847188 1847210 23 2 [1] [1] 2 ydjE MFS transporter
* * ÷ NZ_CP009273 1848761 1848769 9 2 [0] [1] 4 ydjF DeoR/GlpR family DNA‑binding transcription regulator
* * ÷ NZ_CP009273 1855533 1855567 35 2 [1] [1] 2 ydjL zinc‑binding dehydrogenase
* * ÷ NZ_CP009273 1857745 1857788 44 2 [1] [1] 2 gapA glyceraldehyde‑3‑phosphate dehydrogenase
* * ÷ NZ_CP009273 1874152 1874161 10 2 [0] [0] 2 yeaR DUF1971 domain‑containing protein YeaR
* * ÷ NZ_CP009273 1876386 1876416 31 2 [1] [1] 2 dmlA multifunctional D‑malate/3‑isopropylmalate/tartarate dehydrogenase
* * ÷ NZ_CP009273 1876940 1876951 12 2 [1] [1] 2 dmlA multifunctional D‑malate/3‑isopropylmalate/tartarate dehydrogenase
* * ÷ NZ_CP009273 1890213 1890277 65 2 [1] [1] 2 pabB aminodeoxychorismate synthase component 1
* * ÷ NZ_CP009273 1891838 1891874 37 5 [1] [1] 3 sdaA L‑serine ammonia‑lyase
* * ÷ NZ_CP009273 1893365 1893386 22 2 [1] [1] 2 pdeD cyclic diguanylate phosphodiesterase
* * ÷ NZ_CP009273 1899309 1899427 119 2 [1] [1] 2 yobD DUF986 family protein
* * ÷ NZ_CP009273 1899516 1899678 163 2 [0] [0] 2 [yobD] [yobD]
* * ÷ NZ_CP009273 1924774 1924794 21 2 [1] [0] 2 yebG DNA damage‑inducible protein YebG
* * ÷ NZ_CP009273 1938667 1938676 10 2 [1] [0] 2 ruvB Holliday junction branch migration DNA helicase RuvB
* * ÷ NZ_CP009273 1966553 1966590 38 3 [1] [1] 4 tar methyl‑accepting chemotaxis protein II
* * ÷ NZ_CP009273 1967116 1967168 53 2 [1] [1] 2 cheW chemotaxis protein CheW
* * ÷ NZ_CP009273 1973043 1973126 84 2 [1] [1] 2 flhD/uspC flagellar transcriptional regulator FlhD/universal stress protein UspC
* * ÷ NZ_CP009273 1980161 1980228 68 2 [1] [1] 3 araF/ftnB arabinose ABC transporter substrate‑binding protein AraF/non‑heme ferritin‑like protein
* * ÷ NZ_CP009273 1982055 1982091 37 2 [1] [1] 2 yecR/ftnA YecR‑like lipofamily protein/non‑heme ferritin
* * ÷ NZ_CP009273 1991900 1991903 4 2 [0] [0] 3 tcyL cystine ABC transporter permease
* * ÷ NZ_CP009273 2001546 2001613 68 3 [1] [0] 2 [yedD] [yedD]
* * ÷ NZ_CP009273 2001704 2001714 11 2 [0] [0] 2 yedD/yedE lipoprotein/selenium metabolism membrane protein YedE/FdhT
* * ÷ NZ_CP009273 2002361 2002385 25 2 [1] [1] 2 yedE selenium metabolism membrane protein YedE/FdhT
* * ÷ NZ_CP009273 2004825 2004897 73 2 [0] [1] 2 BW25113_RS10120 DUF5503 domain‑containing protein
* * ÷ NZ_CP009273 2009294 2009383 90 2 [1] [1] 2 [fliG]–[fliH] [fliG],[fliH]
* * ÷ NZ_CP009273 2018882 2018946 65 3 [0] [1] 2 yodD/yedP peroxide/acid resistance protein YodD/mannosyl‑3‑phosphoglycerate phosphatase‑related protein
* * ÷ NZ_CP009273 2027091 2027124 34 2 [1] [1] 3 drpB/ompC cell division protein DrpB/porin OmpC
* * ÷ NZ_CP009273 2027391 2027453 63 2 [1] [0] 2 drpB/ompC cell division protein DrpB/porin OmpC
* * ÷ NZ_CP009273 2030468 2030524 57 2 [1] [1] 2 hprS two‑component system sensor histidine kinase HprS
* * ÷ NZ_CP009273 2033206 2033252 47 3 [1] [1] 4 msrP protein‑methionine‑sulfoxide reductase catalytic subunit MsrP
* * ÷ NZ_CP009273 2050183 2050287 105 2 [0] [1] 2 amn/yeeN AMP nucleosidase/YebC/PmpR family DNA‑binding transcriptional regulator
* * ÷ NZ_CP009273 2069584 2069590 7 2 [1] [1] 2 BW25113_RS10450 hypothetical protein
* * ÷ NZ_CP009273 2083367 2083399 33 2 [1] [1] 2 yefM/hisL YoeB‑YefM toxin‑antitoxin system antitoxin YefM/his operon leader peptide
* * ÷ NZ_CP009273 2086208 2086266 59 2 [1] [0] 2 hisC histidinol‑phosphate transaminase
* * ÷ NZ_CP009273 2086548 2086573 26 2 [0] [1] 2 hisC histidinol‑phosphate transaminase
* * ÷ NZ_CP009273 2097436 2097540 105 2 [1] [1] 2 wbbK glycosyltransferase family 1 protein
* * ÷ NZ_CP009273 2099582 2099721 140 2 [1] [0] 2 wzy O16 family O‑antigen polymerase
* * ÷ NZ_CP009273 2100095 2100107 13 2 [1] [0] 2 wzy O16 family O‑antigen polymerase
* * ÷ NZ_CP009273 2118318 2118387 70 2 [1] [0] 5 wcaI colanic acid biosynthesis fucosyltransferase WcaI
* * ÷ NZ_CP009273 2120860 2120888 29 2 [1] [1] 3 gmd GDP‑mannose 4,6‑dehydratase
* * ÷ NZ_CP009273 2125557 2125605 49 2 [1] [1] 2 wcaB colanic acid biosynthesis acetyltransferase WcaB
* * ÷ NZ_CP009273 2129371 2129407 37 2 [1] [1] 5 wzb low molecular weight protein‑tyrosine‑phosphatase Wzb
* * ÷ NZ_CP009273 2137600 2137610 11 2 [1] [1] 3 dgcE diguanylate cyclase
* * ÷ NZ_CP009273 2142595 2142687 93 2 [1] [1] 2 yegI protein kinase YegI
* * ÷ NZ_CP009273 2144515 2144575 61 2 [0] [1] 2 yegI/yegJ protein kinase YegI/DUF2314 domain‑containing protein
* * ÷ NZ_CP009273 2167522 2167535 14 2 [1] [1] 3 BW25113_RS10915 galactitol‑specific PTS transporter subunit IIC
* * ÷ NZ_CP009273 2170650 2170735 86 2 [1] [0] 3 [gatY] [gatY]
* * ÷ NZ_CP009273 2185697 2185868 172 2 [1] [1] 2 [yehD] [yehD]
* * ÷ NZ_CP009273 2195783 2195805 23 2 [0] [1] 2 BW25113_RS11045 DUF4132 domain‑containing protein
* * ÷ NZ_CP009273 2205312 2205323 12 2 [1] [1] 3 yehS DUF1456 family protein
* * ÷ NZ_CP009273 2221757 2221783 27 2 [1] [1] 2 mdtQ multidrug resistance outer membrane protein MdtQ
* * ÷ NZ_CP009273 2222553 2222616 64 2 [1] [0] 4 yohP/dusC protein YohP/tRNA dihydrouridine(16) synthase DusC
* * ÷ NZ_CP009273 2244073 2244122 50 2 [1] [0] 2 yeiH YeiH family protein
* * ÷ NZ_CP009273 2257579 2257627 49 2 [1] [1] 2 setB sugar efflux transporter SetB
* * ÷ NZ_CP009273 2272110 2272148 39 2 [1] [1] 2 bcr multidrug efflux MFS transporter Bcr
* * ÷ NZ_CP009273 2276343 2276381 39 2 [1] [1] 2 rplY/yejK 50S ribosomal protein L25/nucleoid‑associated protein YejK
* * ÷ NZ_CP009273 2279968 2279986 19 2 [0] [1] 4 yejO autotransporter YejO
* * ÷ NZ_CP009273 2300324 2300367 44 2 [1] [1] 2 mqo/yojI malate dehydrogenase (quinone)/microcin J25 efflux ABC transporter YojI
* * ÷ NZ_CP009273 2304342 2304351 10 2 [1] [0] 2 apbE FAD:protein FMN transferase ApbE
* * ÷ NZ_CP009273 2307566 2307576 11 2 [1] [0] 2 rcsD phosphotransferase RcsD
* * ÷ NZ_CP009273 2310844 2310907 64 3 [1] [0] 2 rcsC two‑component system sensor histidine kinase RcsC
* * ÷ NZ_CP009273 2315871 2315909 39 2 [1] [1] 2 atoC acetoacetate metabolism transcriptional regulator AtoC
* * ÷ NZ_CP009273 2323442 2323452 11 3 [1] [1] 2 BW25113_RS11635 alpha‑2‑macroglobulin family protein
* * ÷ NZ_CP009273 2336913 2336923 11 3 [0] [0] 3 yfaL AIDA‑I family autotransporter adhesin YfaL/EhaC
* * ÷ NZ_CP009273 2337315 2337328 14 2 [1] [1] 3 yfaL AIDA‑I family autotransporter adhesin YfaL/EhaC
* * ÷ NZ_CP009273 2338917 2338980 64 2 [0] [1] 3 nrdA ribonucleoside‑diphosphate reductase subunit alpha
* * ÷ NZ_CP009273 2348495 2348533 39 2 [1] [1] 2 glpB glycerol‑3‑phosphate dehydrogenase subunit GlpB
* * ÷ NZ_CP009273 2349142 2349150 9 4 [1] [1] 3 glpC anaerobic glycerol‑3‑phosphate dehydrogenase subunit GlpC
* * ÷ NZ_CP009273 2356844 2356846 3 2 [0] [0] 2 yfaY nicotinamide mononucleotide deamidase‑related protein YfaY
* * ÷ NZ_CP009273 2369682 2369772 91 4 [1] [1] 3 menB 1,4‑dihydroxy‑2‑naphthoyl‑CoA synthase
* * ÷ NZ_CP009273 2381904 2381930 27 2 [1] [1] 2 [BW25113_RS11875] [BW25113_RS11875]
* * ÷ NZ_CP009273 2391059 2391101 43 2 [1] [1] 2 nuoG NADH‑quinone oxidoreductase subunit NuoG
* * ÷ NZ_CP009273 2394114 2394142 29 3 [1] [1] 3 nuoF NADH‑quinone oxidoreductase subunit NuoF
* * ÷ NZ_CP009273 2401588 2401609 22 2 [0] [1] 2 alaA alanine transaminase AlaA
* * ÷ NZ_CP009273 2442155 2442176 22 2 [1] [1] 3 smrB endonuclease SmrB
* * ÷ NZ_CP009273 2453502 2453540 39 2 [0] [1] 3 fadI acetyl‑CoA C‑acyltransferase FadI
* * ÷ NZ_CP009273 2462818 2462855 38 3 [1] [1] 3 BW25113_RS12270 hypothetical protein
* * ÷ NZ_CP009273 2463695 2463767 73 2 [1] [1] 2 BW25113_RS12270 hypothetical protein
* * ÷ NZ_CP009273 2473055 2473057 3 2 [0] [1] 3 dsdA D‑serine ammonia‑lyase
* * ÷ NZ_CP009273 2474730 2474735 6 2 [0] [1] 2 emrY multidrug efflux MFS transporter permease subunit EmrY
* * ÷ NZ_CP009273 2482799 2482809 11 2 [0] [1] 3 yfdV transporter YfdV
* * ÷ NZ_CP009273 2520232 2520284 53 2 [1] [1] 3 yfeR/yfeH LysR family transcriptional regulator/bile acid:sodium symporter
* * ÷ NZ_CP009273 2538562 2538572 11 4 [1] [1] 2 murR HTH‑type transcriptional regulator MurR
* * ÷ NZ_CP009273 2553488 2553564 77 4 [1] [1] 3 intZ/BW25113_RS12740 integrase arm‑type DNA‑binding domain‑containing protein/hypothetical protein
* * ÷ NZ_CP009273 2567313 2567323 11 3 [0] [1] 3 eutT ethanolamine utilization cob(I)yrinic acid a,c‑diamide adenosyltransferase EutT
* * ÷ NZ_CP009273 2567914 2567930 17 2 [1] [0] 3 eutQ ethanolamine utilization acetate kinase EutQ
* * ÷ NZ_CP009273 2584444 2584503 60 2 [0] [1] 2 ypfM/yffB protein YpfM/ArsC family reductase
* * ÷ NZ_CP009273 2599266 2599273 8 2 [1] [1] 2 hyfD hydrogenase 4 subunit HyfD
* * ÷ NZ_CP009273 2620130 2620146 17 3 [1] [1] 2 pdeF cyclic‑guanylate‑specific phosphodiesterase PdeF
* * ÷ NZ_CP009273 2653488 2653550 63 2 [1] [1] 2 iscU Fe‑S cluster assembly scaffold IscU
* * ÷ NZ_CP009273 2664475 2664501 27 2 [1] [0] 2 hcaC bifunctional 3‑phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit
* * ÷ NZ_CP009273 2684823 2684846 24 2 [1] [1] 2 qseE/purL two component system sensor histidine kinase QseE/GlrK/phosphoribosylformylglycinamidine synthase
* * ÷ NZ_CP009273 2698300 2698306 7 2 [0] [1] 2 lepB signal peptidase I
* * ÷ NZ_CP009273 2711480 2711507 28 2 [1] [0] 2 yfiF tRNA/rRNA methyltransferase
* * ÷ NZ_CP009273 2738040 2738050 11 2 [1] [0] 3 trmD tRNA (guanosine(37)‑N1)‑methyltransferase TrmD
* * ÷ NZ_CP009273 2753688 2753705 18 3 [1] [0] 2 yfjI YfjI family protein
* * ÷ NZ_CP009273 2778503 2778567 65 2 [1] [1] 2 BW25113_RS25705/BW25113_RS13825 DUF5507 domain‑containing protein/tRNA‑Ile
* * ÷ NZ_CP009273 2877712 2877789 78 3 [1] [1] 2 casA/cas3 type I‑E CRISPR‑associated protein Cse1/CasA/CRISPR‑associated helicase/endonuclease Cas3
* * ÷ NZ_CP009273 2897102 2897187 86 2 [1] [1] 2 ygcE/queE FGGY‑family carbohydrate kinase/7‑carboxy‑7‑deazaguanine synthase QueE
* * ÷ NZ_CP009273 2898947 2899020 74 2 [1] [1] 3 BW25113_RS14445 hypothetical protein
* * ÷ NZ_CP009273 2999273 2999304 32 2 [1] [0] 2 ygeV/ygeW sigma‑54‑dependent Fis family transcriptional regulator/knotted carbamoyltransferase YgeW
* * ÷ NZ_CP009273 3020299 3020322 24 2 [1] [1] 2 guaD guanine deaminase
* * ÷ NZ_CP009273 3112420 3112451 32 2 [0] [1] 2 sslE lipoprotein metalloprotease SslE
* * ÷ NZ_CP009273 3129934 3129954 21 3 [1] [1] 2 pitB/gss inorganic phosphate transporter PitB/bifunctional glutathionylspermidine amidase/synthase
* * ÷ NZ_CP009273 3206278 3206288 11 2 [1] [0] 2 dnaG/rpoD DNA primase/RNA polymerase sigma factor RpoD
* * ÷ NZ_CP009273 3241542 3241551 10 2 [0] [1] 2 yqjA DedA family protein
* * ÷ NZ_CP009273 3246086 3246188 103 2 [0] [1] 2 yhaH/yhaI DUF805 domain‑containing protein/DUF805 domain‑containing protein
* * ÷ NZ_CP009273 3260753 3260789 37 2 [0] [1] 2 tdcR transcriptional activator TdcR
* * ÷ NZ_CP009273 3262557 3262666 110 2 [1] [1] 3 yhaC YhaC family protein
* * ÷ NZ_CP009273 3275057 3275060 4 2 [1] [0] 2 BW25113_RS16255/agaS amidohydrolase family protein/AgaS family sugar isomerase
* * ÷ NZ_CP009273 3280637 3280659 23 2 [1] [1] 2 agaI/yraH galactosamine‑6‑phosphate isomerase/fimbrial protein
* * ÷ NZ_CP009273 3475822 3475858 37 2 [1] [1] 2 yheS ABC transporter ATP‑binding protein
* * ÷ NZ_CP009273 3792658 3792678 21 2 [1] [1] 2 [waaU] [waaU]
* * ÷ NZ_CP009273 3881609 3881659 51 7 [1] [1] 2 mnmE/tnaC tRNA uridine‑5‑carboxymethylaminomethyl(34) synthesis GTPase MnmE/tryptophanase leader peptide
* * ÷ NZ_CP009273 3943554 3943612 59 2 [1] [1] 2 yifB/ilvL YifB family Mg chelatase‑like AAA ATPase/ilv operon leader peptide
* * ÷ NZ_CP009273 3977065 3977119 55 4 [1] [1] 2 aslB anaerobic sulfatase maturase
* * ÷ NZ_CP009273 4080338 4080379 42 2 [0] [1] 2 [yiiG] [yiiG]
* * ÷ NZ_CP009273 4091300 4091300 1 2 [0] [0] 5 sodA superoxide dismutase [Mn]
* * ÷ NZ_CP009273 4330480 4330496 17 2 [1] [1] 6 adiA/melR arginine decarboxylase/transcriptional regulator MelR
* * ÷ NZ_CP009273 4382747 4382747 1 2 [0] [0] 5 BW25113_RS25810
queG		 hypothetical protein
tRNA epoxyqueuosine(34) reductase QueG
* * ÷ NZ_CP009273 4532588 4532612 25 3 [1] [1] 2 fimE/fimA type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA
* * ÷ NZ_CP009273 4556883 4556890 8 2 [0] [1] 2 yjiN DUF445 domain‑containing protein
* * ÷ NZ_CP009273 4585885 4585889 5 2 [1] [1] 2 lgoD L‑galactonate oxidoreductase

Unassigned new junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 360104 =NA (NA)49 (4.400) 27/166 0.0 NA intergenic (‑35/+251) lacZ/BW25113_RS23320 beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
?NZ_CP009273 = 360286 NA (NA)intergenic (‑217/+69) lacZ/BW25113_RS23320 beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
* ? NZ_CP009273 1203246 =4 (0.360)3 (0.330) 3/134 0.7 42.2% coding (290/630 nt) BW25113_RS05990 hypothetical protein
?NZ_CP009273 1205075 = 5 (0.560)coding (40/540 nt) BW25113_RS06005 phage tail protein
* ? NZ_CP009273 = 1391494NA (NA)9 (0.820) 6/164 0.5 100% intergenic (+145/‑128) BW25113_RS06980/ynaJ IS5‑like element IS5 family transposase/DUF2534 family protein
?NZ_CP009273 1972747 = 0 (0.000)intergenic (‑293/‑487) flhD/uspC flagellar transcriptional regulator FlhD/universal stress protein UspC
* ? NZ_CP009273 = 1391495NA (NA)5 (0.450) 5/166 0.6 100% intergenic (+146/‑127) BW25113_RS06980/ynaJ IS5‑like element IS5 family transposase/DUF2534 family protein
?NZ_CP009273 1903069 = 0 (0.000)intergenic (‑46/‑113) mgrB/yobH PhoP/PhoQ regulator MgrB/YobH family protein
* ? NZ_CP009273 = 19030721 (0.090)14 (1.260) 10/166 0.2 93.3% intergenic (‑49/‑110) mgrB/yobH PhoP/PhoQ regulator MgrB/YobH family protein
?NZ_CP009273 = 2096424 NA (NA)intergenic (‑68/+3) BW25113_RS10605/wbbL IS5‑like element IS5 family transposase/N‑acetylglucosaminyl‑diphospho‑decaprenol L‑rhamnosyltransferase WbbL
* ? NZ_CP009273 = 19727510 (0.000)21 (1.890) 13/166 0.1 100% intergenic (‑297/‑483) flhD/uspC flagellar transcriptional regulator FlhD/universal stress protein UspC
?NZ_CP009273 = 2283592 NA (NA)intergenic (‑68/‑387) BW25113_RS11435/narP IS5‑like element IS5 family transposase/nitrate/nitrite response regulator protein NarP