mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,544,923 | 0 | C | A | 63.6% | ‑4.8 / 11.2 | 11 | N177K (AAC→AAA) | uxuR | Uxu operon transcriptional regulator |
| * | NZ_CP009273 | 4,544,926 | 0 | T | A | 58.3% | 1.3 / 12.8 | 12 | N178K (AAT→AAA) | uxuR | Uxu operon transcriptional regulator |
| * | NZ_CP009273 | 2,254,480 | 0 | A | C | 57.1% | 4.4 / 13.2 | 14 | V137G (GTG→GGG) | fruA | PTS fructose transporter subunit IIBC |
| * | NZ_CP009273 | 3,357,755 | 0 | A | T | 57.1% | ‑1.9 / 12.3 | 14 | P530P (CCA→CCT) | yhcD | fimbrial biogenesis outer membrane usher protein |
| * | NZ_CP009273 | 497,031 | 0 | A | C | 54.5% | 7.2 / 11.7 | 11 | V555G (GTG→GGG) | ybaL | Kef family K(+) transporter |
| * | NZ_CP009273 | 595,045 | 0 | A | G | 54.5% | 7.9 / 10.7 | 11 | R292R (CGA→CGG) | cusA | Cu(+)/Ag(+) efflux RND transporter permease subunit CusA |
| * | NZ_CP009273 | 3,818,086 | 0 | T | G | 54.5% | 6.0 / 11.2 | 11 | V71G (GTA→GGA) | trmH | tRNA (guanosine(18)‑2'‑O)‑methyltransferase TrmH |
| * | NZ_CP009273 | 3,175,946 | 0 | C | G | 53.8% | 2.0 / 10.0 | 13 | A13G (GCA→GGA) | zupT | zinc transporter ZupT |
| * | NZ_CP009273 | 3,342,890 | 0 | G | C | 53.8% | 6.3 / 13.3 | 13 | G93G (GGC→GGG) | mtgA | monofunctional biosynthetic peptidoglycan transglycosylase |
| * | NZ_CP009273 | 4,558,321 | 0 | T | G | 53.8% | 10.9 / 14.7 | 13 | T6P (ACC→CCC) | mdtM | multidrug efflux MFS transporter MdtM |
| * | NZ_CP009273 | 3,659,062 | 0 | C | A | 52.6% | 12.3 / 30.8 | 19 | A37S (GCG→TCG) | gadX | acid resistance transcriptional activator GadX |