mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 23 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4227241 | 149 (1.070) | 3 (0.020) | 3/412 | NT | 2.1% | coding (3414/3684 nt) | metH | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent |
| ? | NC_000913 | = 4227342 | 141 (1.060) | coding (3515/3684 nt) | metH | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent | |||||
| * | ? | NC_000913 | = 4177445 | 158 (1.140) | 3 (0.020) | 3/418 | NT | 2.0% | coding (88/384 nt) | secE | preprotein translocase membrane subunit |
| ? | NC_000913 | = 4177614 | 135 (1.000) | coding (257/384 nt) | secE | preprotein translocase membrane subunit | |||||
| * | ? | NC_000913 | = 4055336 | 167 (1.200) | 4 (0.030) | 4/428 | NT | 2.3% | coding (1004/1050 nt) | glnL | sensory histidine kinase in two‑component regulatory system with GlnG |
| ? | NC_000913 | 4055340 = | 174 (1.260) | coding (1000/1050 nt) | glnL | sensory histidine kinase in two‑component regulatory system with GlnG | |||||
| * | ? | NC_000913 | 4030412 = | 182 (1.310) | 3 (0.020) | 3/402 | NT | 1.9% | coding (560/2190 nt) | fadB | fused 3‑hydroxybutyryl‑CoA epimerase/delta(3)‑cis‑delta(2)‑trans‑enoyl‑CoA isomerase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase |
| ? | NC_000913 | 4031385 = | 140 (1.080) | coding (225/1332 nt) | pepQ | proline dipeptidase | |||||
| * | ? | NC_000913 | = 3830057 | 180 (1.300) | 4 (0.030) | 3/418 | NT | 2.4% | coding (1113/1392 nt) | xanP | xanthine permease |
| ? | NC_000913 | = 3830253 | 157 (1.160) | coding (1309/1392 nt) | xanP | xanthine permease | |||||
| * | ? | NC_000913 | 3520735 = | 141 (1.010) | 4 (0.030) | 3/424 | NT | 2.8% | coding (285/405 nt) | hofP | DNA catabolic protein |
| ? | NC_000913 | 3521432 = | 140 (1.020) | coding (18/441 nt) | hofO | DNA catabolic protein | |||||
| * | ? | NC_000913 | 3502445 = | 228 (1.640) | 3 (0.020) | 3/416 | NT | 1.3% | coding (106/831 nt) | frlC | fructoselysine 3‑epimerase |
| ? | NC_000913 | 3502482 = | 219 (1.630) | coding (143/831 nt) | frlC | fructoselysine 3‑epimerase | |||||
| * | ? | NC_000913 | 3463082 = | 161 (1.160) | 3 (0.020) | 3/420 | NT | 2.0% | coding (159/984 nt) | gspK | general secretory pathway component, cryptic |
| ? | NC_000913 | 3463296 = | 144 (1.060) | coding (373/984 nt) | gspK | general secretory pathway component, cryptic | |||||
| * | ? | NC_000913 | 3230017 = | 147 (1.060) | 3 (0.020) | 3/404 | NT | 2.0% | coding (1130/2352 nt) | ygjK | alpha‑glucosidase |
| ? | NC_000913 | 3230703 = | 163 (1.250) | coding (1816/2352 nt) | ygjK | alpha‑glucosidase | |||||
| * | ? | NC_000913 | 3150913 = | 192 (1.380) | 4 (0.030) | 4/416 | NT | 2.2% | coding (331/426 nt) | exbD | membrane spanning protein in TonB‑ExbB‑ExbD complex |
| ? | NC_000913 | 3151123 = | 162 (1.200) | coding (121/426 nt) | exbD | membrane spanning protein in TonB‑ExbB‑ExbD complex | |||||