mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutation | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 3,483,588 | T→G | L635R (CTG→CGG) | malT → | HTH‑type transcriptional regulator MalT |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_012967 | 3893598–3894996 | 3902864 | 7869–9267 | 68 [62] | [3] 181 | ECB_RS25215–[yieP] | ECB_RS25215,ECB_RS25215,rbsD,rbsA,rbsC,rbsB,rbsK,rbsR,mdtD,[yieP] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 3894996 | NA (NA) | 177 (0.940) | 104/142 | 0.1 | 98.3% | intergenic (+26/‑162) | ECB_RS25215/rbsD | IS3‑like element IS150 family transposase/D‑ribose pyranase |
| ? | NC_012967 | 3902865 = | 3 (0.020) | coding (270/693 nt) | yieP | FadR/GntR family transcriptional regulator | |||||