mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 475,115 | C→A | G64V (GGC→GTC) | ybaL ← | predicted transporter with NAD(P)‑binding Rossmann‑fold domain |
| RA | 1,305,909 | G→A | Q111* (CAG→TAG) | cls ← | cardiolipin synthetase |
| RA | 1,329,516 | C→T | H33Y (CAC→TAC) | topA → | DNA topoisomerase I |
| JC | 1,733,297 | (CGTATGAA)1→2 | coding (333/1413 nt) | pykF → | pyruvate kinase |
| MC JC | 2,100,308 | Δ22,146 bp | ogrK–[ECB_02013] | 27 genes ogrK, yegZ, ECB_01989, ECB_01990, ECB_01991, ECB_01992, ECB_01993, ECB_01994, ECB_01995, ECB_01996, ECB_01997, ECB_01998, ECB_01999, ECB_02000, ECB_02001, ECB_02002, ECB_02003, ECB_02004, ECB_02005, ECB_02006, ECB_02007, ECB_02008, ECB_02009, ECB_02010, ECB_02011, ECB_02012, [ECB_02013] |
|
| RA | 2,193,779 | G→T | L143I (CTT→ATT) | yeiB ← | conserved inner membrane protein |
| RA | 3,145,998 | C→T | I45I (ATC→ATT) | rpoD → | RNA polymerase sigma factor |
| RA | 3,190,370 | A→G | L204P (CTG→CCG) | yhaO ← | predicted transporter |
| RA | 3,251,818 | C→T | A315T (GCG→ACG) | nusA ← | transcription elongation factor NusA |
| RA | 3,328,543 | C→T | A146T (GCT→ACT) | mreB ← | cell wall structural complex MreBCD, actin‑like component MreB |
| RA | 3,498,010 | G→A | S9L (TCG→TTG) | glgP ← | glycogen phosphorylase |
| RA | 3,498,251 | G→A | L413F (CTT→TTT) | glgA ← | glycogen synthase |
| RA | 3,762,741 | A→T | K662I (AAA→ATA) | spoT → | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| RA | 3,875,632 | (T)7→8 | intergenic (‑66/+287) | glmU ← / ← atpC | bifunctional N‑acetylglucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyltransferase/F0F1 ATP synthase subunit epsilon |
| MC JC | 3,894,997 | Δ6,934 bp | IS150‑mediated | rbsD–[yieO] | rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO] |
| JC | 4,096,818 | (AGTTTGC)1→2 | coding (755/846 nt) | glpF ← | glycerol facilitator |
| RA | 4,163,272 | C→T | P806L (CCG→CTG) | rpoB → | DNA‑directed RNA polymerase subunit beta |
| JC JC | 4,524,522 | IS186 (+) +6 bp | coding (494‑499/549 nt) | fimA → | major type 1 subunit fimbrin (pilin) |