breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Predicted mutations | |||||
---|---|---|---|---|---|
evidence | position | mutation | annotation | gene | description |
RA | 318,568 | T→C | Q140Q (CAA→CAG) | yahN ← | neutral amino‑acid efflux system |
RA | 1,304,826 | G→A | Q472* (CAA→TAA) | cls ← | cardiolipin synthetase |
RA | 1,329,516 | C→T | H33Y (CAC→TAC) | topA → | DNA topoisomerase I |
RA | 1,689,712 | (C)6→5 | intergenic (+360/‑251) | nth → / → ydgR | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/putative tripeptide transporter permease |
JC | 1,733,297 | (CGTATGAA)1→2 | coding (333/1413 nt) | pykF → | pyruvate kinase |
RA | 2,193,779 | G→T | L143I (CTT→ATT) | yeiB ← | conserved inner membrane protein |
RA | 2,511,637 | A→G | intergenic (+101/‑438) | acrD → / → yffB | aminoglycoside/multidrug efflux system/hypothetical protein |
RA | 3,531,179 | A→C | V97G (GTG→GGG) | rpoH ← | RNA polymerase sigma factor |
RA | 3,762,741 | A→T | K662I (AAA→ATA) | spoT → | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
RA | 3,875,632 | (T)7→8 | intergenic (‑66/+287) | glmU ← / ← atpC | bifunctional N‑acetylglucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyltransferase/F0F1 ATP synthase subunit epsilon |
MC JC | 3,894,997 | Δ6,934 bp | IS150‑mediated | rbsD–[yieO] | rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO] |
RA | 3,928,260 | T→A | I15N (ATC→AAC) | rho → | transcription termination factor Rho |
JC | 4,097,038 | (AGCAAGGGAGC)1→2 | coding (535/846 nt) | glpF ← | glycerol facilitator |
RA | 4,180,200 | T→G | V8G (GTG→GGG) | yjaH → | hypothetical protein |
RA | 4,404,055 | T→A | I21N (ATC→AAC) | rpsR → | 30S ribosomal protein S18 |
JC JC | 4,524,522 | IS186 (+) +6 bp | coding (494‑499/549 nt) | fimA → | major type 1 subunit fimbrin (pilin) |