mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3369704 = | 21 (0.710) | 4 (0.140) | 3/236 | NT | 18.5% | coding (2967/3015 nt) | PP_2964 | transposase |
| ? | NC_002947 | 3369735 = | 15 (0.530) | coding (2998/3015 nt) | PP_2964 | transposase | |||||
| * | ? | NC_002947 | 1899413 = | 30 (1.020) | 4 (0.150) | 3/226 | NT | 10.9% | intergenic (+441/‑79) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase |
| ? | NC_002947 | 1899467 = | 38 (1.400) | intergenic (+495/‑25) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase | |||||
| * | ? | NC_002947 | 1436103 = | 37 (1.250) | 4 (0.140) +A |
3/244 | NT | 10.1% | intergenic (‑133/+20) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
| ? | NC_002947 | 6060492 = | 35 (1.180) | intergenic (+72/+109) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein | |||||
| * | ? | NC_002947 | 1436103 = | 37 (1.250) | 4 (0.140) +A |
3/244 | NT | 10.7% | intergenic (‑133/+20) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
| ? | NC_002947 | 2957120 = | 30 (1.020) | intergenic (+32/‑164) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein | |||||
| * | ? | NC_002947 | = 948150 | 34 (1.150) | 4 (0.140) | 3/234 | NT | 10.9% | coding (624/1179 nt) | hmp | flavohemoprotein |
| ? | NC_002947 | = 948173 | 33 (1.170) | coding (647/1179 nt) | hmp | flavohemoprotein | |||||
| * | ? | NC_002947 | = 478293 | 36 (1.220) | 4 (0.180) | 3/186 | NT | 13.3% | intergenic (+38/+72) | PP_0393/cca | 2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase |
| ? | NC_002947 | = 478328 | 25 (1.120) | intergenic (+73/+37) | PP_0393/cca | 2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase | |||||
| * | ? | NC_002947 | = 452662 | 36 (1.220) | 4 (0.140) | 3/234 | NT | 10.4% | coding (577/1281 nt) | aruC | acetylornithine aminotransferase |
| ? | NC_002947 | = 452675 | 35 (1.250) | coding (590/1281 nt) | aruC | acetylornithine aminotransferase | |||||