mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 189 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6166516 | 79 (0.900) | 4 (0.050) | 3/240 | NT | 5.1% | intergenic (‑219/‑461) | PP_5406/PP_5407 | transposase/TnsD‑like transposition protein |
| ? | NC_002947 | = 6166540 | 72 (0.840) | intergenic (‑243/‑437) | PP_5406/PP_5407 | transposase/TnsD‑like transposition protein | |||||
| * | ? | NC_002947 | 6141501 = | 103 (1.170) | 5 (0.060) | 4/230 | NT | 5.0% | coding (1181/3159 nt) | cusA | CzcA family RND family copper transporter |
| ? | NC_002947 | 6141541 = | 95 (1.160) | coding (1221/3159 nt) | cusA | CzcA family RND family copper transporter | |||||
| * | ? | NC_002947 | = 6125135 | 65 (0.740) | 3 (0.040) | 3/238 | NT | 4.5% | intergenic (‑271/‑127) | PP_5373/PP_5374 | Rieske 2Fe‑2S family protein/choline/carnitine/betaine transporter family protein |
| ? | NC_002947 | = 6125155 | 65 (0.770) | intergenic (‑291/‑107) | PP_5373/PP_5374 | Rieske 2Fe‑2S family protein/choline/carnitine/betaine transporter family protein | |||||
| * | ? | NC_002947 | 6014745 = | 89 (1.010) | 4 (0.050) | 4/236 | NT | 4.5% | coding (1076/1860 nt) | PP_5266 | acetyl‑CoA hydrolase family protein |
| ? | NC_002947 | 6014776 = | 87 (1.040) | coding (1045/1860 nt) | PP_5266 | acetyl‑CoA hydrolase family protein | |||||
| * | ? | NC_002947 | = 6009988 | 130 (1.470) | 5 (0.060) | 5/244 | NT | 3.8% | coding (921/1668 nt) | PP_5263 | GGDEF domain‑containing protein |
| ? | NC_002947 | = 6010006 | 126 (1.450) | coding (903/1668 nt) | PP_5263 | GGDEF domain‑containing protein | |||||
| * | ? | NC_002947 | = 5918398 | 97 (1.100) | 4 (0.050) | 4/214 | NT | 4.1% | intergenic (+32/+63) | ygiF/PP_5188 | thiamine triphosphatase/AsnC/Lrp family transcriptional regulator |
| ? | NC_002947 | = 5918438 | 104 (1.370) | intergenic (+72/+23) | ygiF/PP_5188 | thiamine triphosphatase/AsnC/Lrp family transcriptional regulator | |||||
| * | ? | NC_002947 | = 5827915 | 132 (1.500) | 4 (0.050) | 4/232 | NT | 3.1% | intergenic (+61/+138) | mtgA/rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 |
| ? | NC_002947 | = 5827978 | 126 (1.530) | intergenic (+124/+75) | mtgA/rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 | |||||
| * | ? | NC_002947 | 5827908 = | 127 (1.440) | 5 (0.060) | 5/232 | NT | 3.9% | intergenic (+54/+145) | mtgA/rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 |
| ? | NC_002947 | 5827987 = | 126 (1.530) | intergenic (+133/+66) | mtgA/rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 | |||||
| * | ? | NC_002947 | = 5820450 | 93 (1.050) | 4 (0.050) | 4/240 | NT | 4.1% | coding (144/1140 nt) | metX | homoserine O‑acetyltransferase |
| ? | NC_002947 | = 5820464 | 98 (1.150) | coding (158/1140 nt) | metX | homoserine O‑acetyltransferase | |||||
| * | ? | NC_002947 | = 5812268 | 105 (1.190) | 4 (0.050) | 4/236 | NT | 3.7% | coding (1540/2220 nt) | priA | primosome assembly protein |
| ? | NC_002947 | = 5812286 | 110 (1.310) | coding (1558/2220 nt) | priA | primosome assembly protein | |||||