mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 354 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6177773 = | 233 (1.180) | 3 (0.020) | 3/266 | NT | 1.3% | coding (802/1377 nt) | atpD | ATP synthase subunit beta |
| ? | NC_002947 | 6177808 = | 229 (1.210) | coding (767/1377 nt) | atpD | ATP synthase subunit beta | |||||
| * | ? | NC_002947 | = 6143421 | 196 (1.000) | 5 (0.030) | 5/276 | NT | 2.3% | coding (1179/3159 nt) | cusA | CzcA family RND family copper transporter |
| ? | NC_002947 | = 6143463 | 221 (1.120) | coding (1221/3159 nt) | cusA | CzcA family RND family copper transporter | |||||
| * | ? | NC_002947 | 6139432 = | 243 (1.230) | 3 (0.020) | 3/260 | NT | 1.2% | coding (349/351 nt) | PP_5733 | metal‑binding protein |
| ? | NC_002947 | 6139519 = | 253 (1.360) | intergenic (+85/‑5) | PP_5733/czcC | metal‑binding protein/CzcC family metal RND transporter outer membrane protein | |||||
| * | ? | NC_002947 | = 6105810 | 209 (1.060) | 3 (0.020) | 3/264 | NT | 1.4% | coding (665/855 nt) | PP_5353 | hypothetical protein |
| ? | NC_002947 | = 6105836 | 223 (1.180) | coding (691/855 nt) | PP_5353 | hypothetical protein | |||||
| * | ? | NC_002947 | = 6089565 | 141 (0.720) | 6 (0.030) | 5/248 | NT | 4.6% | intergenic (+38/‑192) | oruR/aphA | ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase |
| ? | NC_002947 | = 6089599 | 121 (0.680) | intergenic (+72/‑158) | oruR/aphA | ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase | |||||
| * | ? | NC_002947 | 6079799 = | 128 (0.650) | 4 (0.020) | 4/228 | NT | 3.3% | intergenic (‑123/+115) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter |
| ? | NC_002947 | 6079899 = | 129 (0.790) | intergenic (‑223/+15) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter | |||||
| * | ? | NC_002947 | = 6064950 | 234 (1.190) | 3 (0.020) | 3/266 | NT | 1.3% | intergenic (‑85/‑140) | rubA/ubiC | rubredoxin‑1/chorismate pyruvate‑lyase |
| ? | NC_002947 | = 6064982 | 234 (1.230) | intergenic (‑117/‑108) | rubA/ubiC | rubredoxin‑1/chorismate pyruvate‑lyase | |||||
| * | ? | NC_002947 | = 6061370 | 188 (0.950) | 8 (0.040) | 6/260 | NT | 4.1% | coding (432/1404 nt) | PP_5311 | signal transduction protein |
| ? | NC_002947 | = 6061391 | 193 (1.040) | coding (453/1404 nt) | PP_5311 | signal transduction protein | |||||
| * | ? | NC_002947 | 6059426 = | 255 (1.290) | 4 (0.020) | 4/256 | NT | 1.6% | coding (645/2079 nt) | recG | junction‑specific ATP‑dependent DNA helicase |
| ? | NC_002947 | 6059464 = | 248 (1.360) | coding (683/2079 nt) | recG | junction‑specific ATP‑dependent DNA helicase | |||||
| * | ? | NC_002947 | = 6057130 | 164 (0.830) | 5 (0.030) | 5/260 | NT | 3.1% | coding (105/732 nt) | tonB | TonB energy transducing system subunit TonB |
| ? | NC_002947 | = 6057170 | 163 (0.880) | coding (145/732 nt) | tonB | TonB energy transducing system subunit TonB | |||||