mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 21 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4110461 | 66 (0.750) | 3 (0.040) | 3/248 | NT | 4.1% | coding (532/756 nt) | cdh | CDP‑diacylglycerol phosphotidylhydrolase |
| ? | NC_000913 | = 4110489 | 75 (0.880) | coding (560/756 nt) | cdh | CDP‑diacylglycerol phosphotidylhydrolase | |||||
| * | ? | NC_000913 | = 4008067 | 63 (0.720) | 3 (0.040) | 3/242 | NT | 4.7% | coding (311/621 nt) | rhtC | threonine efflux pump |
| ? | NC_000913 | = 4008090 | 62 (0.750) | coding (334/621 nt) | rhtC | threonine efflux pump | |||||
| * | ? | NC_000913 | = 3884921 | 91 (1.030) | 4 (0.050) | 4/238 | NT | 4.3% | coding (106/258 nt) | yidD | membrane protein insertion efficiency factor, UPF0161 family inner membrane protein |
| ? | NC_000913 | = 3884957 | 94 (1.150) | coding (142/258 nt) | yidD | membrane protein insertion efficiency factor, UPF0161 family inner membrane protein | |||||
| * | ? | NC_000913 | = 3776009 | 175 (1.990) | 8 (0.100) | 9/238 | NT | 4.4% | coding (438/588 nt) | mtlR | mannitol operon repressor |
| ? | NC_000913 | = 3776016 | 188 (2.300) | coding (445/588 nt) | mtlR | mannitol operon repressor | |||||
| * | ? | NC_000913 | 3767549 = | 295 (3.350) | 4 (0.050) | 4/244 | NT | 1.3% | pseudogene (329/945 nt) | rhsJ | Rhs‑family protein |
| ? | NC_000913 | 3767585 = | 319 (3.800) | pseudogene (365/945 nt) | rhsJ | Rhs‑family protein | |||||
| * | ? | NC_000913 | 3755505 = | 345 (3.920) | 4 (0.050) | 4/242 | NT | 1.2% | coding (1007/1539 nt) | aldB | aldehyde dehydrogenase B |
| ? | NC_000913 | 3755556 = | 318 (3.820) | coding (956/1539 nt) | aldB | aldehyde dehydrogenase B | |||||
| * | ? | NC_000913 | 3743826 = | 225 (2.560) | 5 (0.060) | 4/242 | NT | 2.4% | coding (84/468 nt) | yiaL | DUF386 family protein |
| ? | NC_000913 | 3743864 = | 186 (2.240) | coding (122/468 nt) | yiaL | DUF386 family protein | |||||
| * | ? | NC_000913 | = 3741405 | 387 (4.400) | 6 (0.070) | 4/246 | NT | 1.6% | coding (178/474 nt) | ysaA | putative hydrogenase, 4Fe‑4S ferredoxin‑type component |
| ? | NC_000913 | = 3741430 | 378 (4.470) | coding (153/474 nt) | ysaA | putative hydrogenase, 4Fe‑4S ferredoxin‑type component | |||||
| * | ? | NC_000913 | = 3740321 | 355 (4.040) | 4 (0.050) | 4/246 | NT | 1.2% | coding (617/1254 nt) | avtA | valine‑pyruvate aminotransferase; transaminase C; alanine‑valine transaminase |
| ? | NC_000913 | = 3740368 | 340 (4.020) | coding (664/1254 nt) | avtA | valine‑pyruvate aminotransferase; transaminase C; alanine‑valine transaminase | |||||
| * | ? | NC_000913 | 3722723 = | 368 (4.180) | 4 (0.050) | 3/250 | NT | 1.1% | coding (1675/2070 nt) | glyS | glycine tRNA synthetase, beta subunit |
| ? | NC_000913 | 3722760 = | 340 (3.960) | coding (1638/2070 nt) | glyS | glycine tRNA synthetase, beta subunit | |||||