mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 153 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636330 | 166 (0.900) | 4 (0.020) | 3/242 | NT | 2.7% | coding (324/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636367 | 135 (0.780) | coding (361/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4636324 = | 156 (0.850) | 3 (0.020) | 3/242 | NT | 2.1% | coding (318/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | 4636375 = | 135 (0.780) | coding (369/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | = 4602165 | 187 (1.020) | 7 (0.040) | 7/242 | NT | 3.7% | coding (694/771 nt) | yjjP | DUF1212 family inner membrane protein |
| ? | NC_000913 | = 4602178 | 189 (1.090) | coding (681/771 nt) | yjjP | DUF1212 family inner membrane protein | |||||
| * | ? | NC_000913 | = 4585317 | 143 (0.780) | 4 (0.020) | 4/242 | NT | 2.9% | coding (1445/3513 nt) | hsdR | endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4585344 | 137 (0.790) | coding (1418/3513 nt) | hsdR | endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | 4543430 = | 185 (1.010) | 3 (0.020) | 3/238 | NT | 1.8% | coding (316/549 nt) | fimA | major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | 4543484 = | 154 (0.900) | coding (370/549 nt) | fimA | major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | 4542682 = | 83 (0.450) | 3 (0.020) | 3/238 | NT | 2.4% | intergenic (+49/‑433) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | 4542996 = | 171 (1.000) | intergenic (+363/‑119) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | 4534768 = | 228 (1.240) | 4 (0.020) | 4/248 | NT | 1.8% | intergenic (‑93/‑23) | yjhZ/yjhR | pseudogene, rimK paralog, C‑terminal fragment/pseudogene, helicase family; putative frameshift suppressor |
| ? | NC_000913 | 4534790 = | 225 (1.260) | intergenic (‑115/‑1) | yjhZ/yjhR | pseudogene, rimK paralog, C‑terminal fragment/pseudogene, helicase family; putative frameshift suppressor | |||||
| * | ? | NC_000913 | 4450215 = | 150 (0.820) | 4 (0.020) | 4/248 | NT | 2.7% | coding (254/957 nt) | ytfQ | galactofuranose ABC transporter periplasmic binding protein |
| ? | NC_000913 | 4450233 = | 144 (0.810) | coding (272/957 nt) | ytfQ | galactofuranose ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | 4425590 = | 174 (0.950) | 3 (0.020) | 3/244 | NT | 1.7% | coding (71/315 nt) | priB | primosomal protein N |
| ? | NC_000913 | 4425637 = | 175 (1.000) | coding (118/315 nt) | priB | primosomal protein N | |||||
| * | ? | NC_000913 | = 4417460 | 196 (1.070) | 5 (0.030) | 5/242 | NT | 2.6% | coding (509/750 nt) | yjfP | acyl CoA esterase |
| ? | NC_000913 | = 4417479 | 195 (1.120) | coding (528/750 nt) | yjfP | acyl CoA esterase | |||||