mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 307 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4636324 = | 194 (1.040) | 8 (0.050) | 7/224 | NT | 4.2% | coding (318/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | 4636375 = | 185 (1.050) | coding (369/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4634391 = | 213 (1.140) | 4 (0.020) | 4/224 | NT | 1.9% | coding (595/648 nt) | ytjC | phosphatase |
| ? | NC_000913 | 4634423 = | 220 (1.250) | coding (627/648 nt) | ytjC | phosphatase | |||||
| * | ? | NC_000913 | = 4625061 | 295 (1.580) | 9 (0.050) | 5/230 | NT | 3.1% | coding (167/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | NC_000913 | = 4625081 | 272 (1.510) | coding (187/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| * | ? | NC_000913 | 4586784 = | 153 (0.820) | 4 (0.020) | 4/226 | NT | 2.5% | intergenic (‑23/‑165) | hsdR/mrr | endonuclease R Type I restriction enzyme/methylated adenine and cytosine restriction protein |
| ? | NC_000913 | 4586809 = | 169 (0.950) | intergenic (‑48/‑140) | hsdR/mrr | endonuclease R Type I restriction enzyme/methylated adenine and cytosine restriction protein | |||||
| * | ? | NC_000913 | 4583412 = | 114 (0.610) | 5 (0.030) | 5/226 | NT | 4.6% | coding (3350/3513 nt) | hsdR | endonuclease R Type I restriction enzyme |
| ? | NC_000913 | 4583454 = | 98 (0.550) | coding (3308/3513 nt) | hsdR | endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | = 4530145 | 296 (1.590) | 13 (0.070) | 10/226 | NT | 4.3% | coding (99/1314 nt) | sgcC | putative PTS system EIIC permease component |
| ? | NC_000913 | = 4530173 | 298 (1.680) | coding (71/1314 nt) | sgcC | putative PTS system EIIC permease component | |||||
| * | ? | NC_000913 | 4528477 = | 240 (1.290) | 4 (0.020) | 4/230 | NT | 1.9% | coding (441/807 nt) | sgcQ | putative nucleoside triphosphatase |
| ? | NC_000913 | 4528504 = | 190 (1.050) | coding (414/807 nt) | sgcQ | putative nucleoside triphosphatase | |||||
| * | ? | NC_000913 | = 4511780 | 185 (0.990) | 4 (0.020) | 4/230 | NT | 2.1% | coding (635/957 nt) | fecD | ferric citrate ABC transporter permease |
| ? | NC_000913 | = 4511807 | 189 (1.050) | coding (608/957 nt) | fecD | ferric citrate ABC transporter permease | |||||
| * | ? | NC_000913 | = 4497499 | 152 (0.810) | 7 (0.040) | 6/226 | NT | 4.7% | pseudogene (825/1266 nt) | intB | pseudogene, integrase homology;IS, phage, Tn; Phage‑related functions and prophages; KpLE2 phage‑like element; P4‑like integrase |
| ? | NC_000913 | = 4497525 | 139 (0.780) | pseudogene (851/1266 nt) | intB | pseudogene, integrase homology;IS, phage, Tn; Phage‑related functions and prophages; KpLE2 phage‑like element; P4‑like integrase | |||||
| * | ? | NC_000913 | 4468302 = | 271 (1.450) | 7 (0.040) | 5/228 | NT | 2.6% | coding (678/2697 nt) | mgtA | magnesium transporter |
| ? | NC_000913 | 4468328 = | 269 (1.510) | coding (704/2697 nt) | mgtA | magnesium transporter | |||||