mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 76 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4161725 | 20 (0.350) | 3 (0.000) | 3/122 | 4.0 | 18.6% | intergenic (+41/‑260) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
| ? | KX077536 | = 8154 | 8 (0.000) | intergenic (+79/–) | unknown/– | cat/– | |||||
| * | ? | CP009273 | = 4161725 | 20 (0.350) | 3 (0.000) | 3/122 | 4.0 | 0.45% | intergenic (+41/‑260) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
| ? | Exported | = 2325 | 1315 (0.060) | intergenic (+91/–) | fdh/– | formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag/– | |||||
| * | ? | CP009273 | 360232 = | 60 (1.060) | 3 (0.000) | 3/122 | 4.0 | 8.7% | intergenic (‑166/+429) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |
| ? | KX077536 | = 8154 | 8 (0.000) | intergenic (+79/–) | unknown/– | cat/– | |||||
| * | ? | CP009273 | 360232 = | 60 (1.060) | 3 (0.000) | 3/122 | 4.0 | 0.44% | intergenic (‑166/+429) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |
| ? | Exported | = 2325 | 1315 (0.060) | intergenic (+91/–) | fdh/– | formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag/– | |||||
| * | ? | KX077536 | 1 = | 0 (0.000) | 1789 (1.060) +AACAACAG |
24/118 | 5.6 | 100% | intergenic (–/‑1098) | –/unknown | –/BLA |
| ? | KX077536 | 8136 = | NA (NA) | intergenic (+61/–) | unknown/– | cat/– | |||||
| * | ? | KX077536 | 897 = | 976 (0.510) | 22 (0.010) | 10/126 | 9.1 | 2.6% | intergenic (–/‑202) | –/unknown | –/BLA |
| ? | KX077536 | 906 = | 714 (0.390) | intergenic (–/‑193) | –/unknown | –/BLA | |||||
| * | ? | Exported | 3273 = | 5926 (0.230) | 21 (0.000) | 10/126 | 9.1 | 0.65% | intergenic (+1039/–) | fdh/– | formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag/– |
| ? | KX077536 | 901 = | 801 (0.440) | intergenic (–/‑198) | –/unknown | –/BLA | |||||
| * | ? | Exported | 3268 = | 7452 (0.290) | 21 (0.000) | 10/126 | 9.1 | 0.54% | intergenic (+1034/–) | fdh/– | formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag/– |
| ? | KX077536 | 906 = | 714 (0.390) | intergenic (–/‑193) | –/unknown | –/BLA | |||||
| * | ? | Exported | = 854 | 10673 (0.420) | 41 (0.000) +AATT |
6/126 | 10.5 | 0.72% | intergenic (‑62/‑157) | aadA/fdh | aminoglycoside adenylyltransferase (Murphy, 1985)/formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag |
| ? | KX077536 | 1037 = | 1307 (0.680) | intergenic (–/‑62) | –/unknown | –/BLA | |||||
| * | ? | Exported | = 846 | 17216 (0.670) | 12 (0.000) | 4/118 | 11.2 | 0.14% | intergenic (‑54/‑165) | aadA/fdh | aminoglycoside adenylyltransferase (Murphy, 1985)/formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag |
| ? | KX077536 | 1053 = | 1452 (0.860) | intergenic (–/‑46) | –/unknown | –/BLA | |||||