mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 787 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4615358 | 314 (0.750) | 5 (0.010) | 4/94 | NT | 1.8% | coding (647/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | CP009273 | = 4615477 | 277 (0.790) | coding (766/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| * | ? | CP009273 | 4603949 = | 240 (0.580) | 3 (0.010) | 3/94 | NT | 1.6% | coding (652/780 nt) | yjjV | putative DNase |
| ? | CP009273 | 4603980 = | 161 (0.460) | coding (683/780 nt) | yjjV | putative DNase | |||||
| * | ? | CP009273 | 4598786 = | 328 (0.790) | 3 (0.010) | 3/88 | NT | 1.2% | coding (324/678 nt) | yjjG | dUMP phosphatase |
| ? | CP009273 | 4598911 = | 228 (0.700) | coding (449/678 nt) | yjjG | dUMP phosphatase | |||||
| * | ? | CP009273 | = 4594670 | 470 (1.130) | 7 (0.020) | 5/98 | NT | 1.6% | intergenic (+16/+22) | bglJ/fhuF | bgl operon transcriptional activator/ferric iron reductase involved in ferric hydroximate transport |
| ? | CP009273 | = 4594678 | 426 (1.170) | intergenic (+24/+14) | bglJ/fhuF | bgl operon transcriptional activator/ferric iron reductase involved in ferric hydroximate transport | |||||
| * | ? | CP009273 | 4559156 = | 678 (1.630) | 6 (0.020) | 4/96 | NT | 1.1% | pseudogene (342/921 nt) | yjiP | pseudogene, transposase_31 family protein |
| ? | CP009273 | 4559196 = | 518 (1.450) | pseudogene (382/921 nt) | yjiP | pseudogene, transposase_31 family protein | |||||
| * | ? | CP009273 | 4557863 = | 431 (1.030) | 7 (0.020) | 4/98 | NT | 1.9% | coding (474/1233 nt) | mdtM | multidrug efflux system protein |
| ? | CP009273 | 4557894 = | 349 (0.960) | coding (443/1233 nt) | mdtM | multidrug efflux system protein | |||||
| * | ? | CP009273 | = 4552439 | 419 (1.000) | 3 (0.010) | 3/96 | NT | 0.92% | coding (54/1179 nt) | yjiJ | DUF1228 family putative inner membrane MFS superfamily transporter |
| ? | CP009273 | = 4552470 | 288 (0.810) | coding (23/1179 nt) | yjiJ | DUF1228 family putative inner membrane MFS superfamily transporter | |||||
| * | ? | CP009273 | = 4549707 | 357 (0.860) | 4 (0.010) | 3/108 | NT | 1.2% | coding (111/462 nt) | yjiG | SpmB family inner membrane protein |
| ? | CP009273 | = 4549730 | 339 (0.840) | coding (88/462 nt) | yjiG | SpmB family inner membrane protein | |||||
| * | ? | CP009273 | 4548119 = | 297 (0.710) | 7 (0.020) | 5/88 | NT | 2.8% | intergenic (‑13/+52) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase |
| ? | CP009273 | 4548166 = | 254 (0.780) | intergenic (‑60/+5) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase | |||||
| * | ? | CP009273 | = 4542649 | 348 (0.830) | 14 (0.040) | 3/98 | NT | 3.6% | intergenic (+12/‑69) | uxuA/uxuB | mannonate hydrolase/D‑mannonate oxidoreductase, NAD‑dependent |
| ? | CP009273 | = 4542662 | 454 (1.240) | intergenic (+25/‑56) | uxuA/uxuB | mannonate hydrolase/D‑mannonate oxidoreductase, NAD‑dependent | |||||