Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A12 F6 I1 R1 78 1766.9 106897164 98.9% 105721295 100.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA AE015451_phaM1 5,555,608 +GCC intergenic (‑84/+87) PP_4887 CDS (conserved protein of unknown function) ← / ← PP_4888 CDS (putative methyl‑accepting chemotaxis transducer) –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AE015451_phaM15,555,6081.G99.4% 2430.6 / 8.0 781intergenic (‑84/+87)PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)–/–
Reads supporting (aligned to +/- strand):  ref base . (1/4);  new base G (154/617);  total (155/626)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*AE015451_phaM15,555,6082.C99.4% 2465.9 / 7.3 781intergenic (‑84/+87)PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)–/–
Reads supporting (aligned to +/- strand):  ref base . (1/4);  new base C (154/622);  total (155/626)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*AE015451_phaM15,555,6083.C97.6% 2421.7 / 57.5 781intergenic (‑84/+87)PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)–/–
Reads supporting (aligned to +/- strand):  ref base . (4/15);  new base C (151/610);  total (155/626)
Fisher's exact test for biased strand distribution p-value = 7.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 841 total aligned reads displayed.

GCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑G‑‑‑C‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGC  >  AE015451_phaM1/5555473‑5555693
                                                                                                                                         |||                                                                                        
                          gCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGgct                                                  <  1:101463/150‑1 (MQ=255)
                                    gggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑g                                                                                             <  7:37310791/100‑1 (MQ=255)
                                       cGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑ggcc                                                                                          <  8:2410393/100‑4 (MQ=255)
                                        ggACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑ggccc                                                                                         <  7:560410/100‑5 (MQ=255)
                                                  aaCTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCATGTGTGGGAGCGGCCTTGTTTCGCGAAAGGGCCGCAGAGC‑GGCCC‑C‑‑GGCAATTTc                                                                            <  7:32272443/100‑1 (MQ=21)
                                                   aCTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAGAGC‑GGCCC‑C‑‑GGCAATTTcc                                                                           <  8:11783864/100‑1 (MQ=21)
                                                     tCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCcgc                                                                         <  8:9265044/100‑1 (MQ=25)
                                                     tCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCcgc                                                                         <  8:44943991/100‑1 (MQ=25)
                                                     tCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCcgc                                                                         <  7:42471822/100‑1 (MQ=25)
                                                       cTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCgt                                                                       <  4:190054/100‑1 (MQ=25)
                                                       cTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCgt                                                                       <  8:27105905/100‑1 (MQ=25)
                                                         tttGTCATGTGTCGCCGACAGCATAACAACACCGCTCAGGTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCgtgt                                                                     <  7:51933107/100‑1 (MQ=25)
                                                          ttGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGATCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTa                                                                    <  7:44111770/100‑1 (MQ=25)
                                                          ttGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTa                                                                    <  8:13179072/100‑1 (MQ=25)
                                                           tGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTTGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTAt                                                                   <  8:10465935/100‑1 (MQ=25)
                                                           tGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTAt                                                                   <  7:48302375/100‑1 (MQ=25)
                                                            gTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTcc                                                                           >  8:32845744/1‑91 (MQ=21)
                                                            gTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATg                                                                  <  8:18586040/100‑1 (MQ=25)
                                                            gTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATg                                                                  <  8:19549274/100‑1 (MQ=25)
                                                             tCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGc                                                                 <  7:5010381/100‑1 (MQ=25)
                                                             tCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGc                                                                 <  8:42420906/100‑1 (MQ=25)
                                                             tCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGc                                                                 <  7:4605065/100‑1 (MQ=25)
                                                             tCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGc                                                                 <  7:11526427/100‑1 (MQ=25)
                                                              cATGTGTCGCCGACAGCATAGCAACACCTCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGca                                                                <  7:11932278/100‑1 (MQ=21)
                                                                 gtgtAGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGcaaca                                                             <  7:35472015/100‑1 (MQ=21)
                                                                  tgtCGCCGACAGCATAGCGACACCGCTCAGGTGTGGGAGTGGCCTTGTTTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGcaacaa                                                            <  8:51593619/100‑1 (MQ=21)
                                                                   gtCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACaaa                                                           <  8:37883886/100‑1 (MQ=25)
                                                                    tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAAc                                                          <  7:10034403/100‑1 (MQ=25)
                                                                    tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAAc                                                          <  7:26919776/100‑1 (MQ=25)
                                                                     cGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                         <  7:3106732/100‑1 (MQ=25)
                                                                     cGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                         <  7:42084839/100‑1 (MQ=25)
                                                                     cGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                         <  7:23066803/100‑1 (MQ=25)
                                                                     cGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                         <  8:40161327/100‑1 (MQ=25)
                                                                      gCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCt                                                        <  7:5967142/100‑1 (MQ=25)
                                                                      gCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCt                                                        <  8:39887013/100‑1 (MQ=25)
                                                                       ccGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTg                                                       <  7:13726441/100‑1 (MQ=25)
                                                                        cGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTgg                                                      <  7:3187420/100‑1 (MQ=25)
                                                                         gACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTggg                                                     <  8:22111483/100‑1 (MQ=25)
                                                                         gACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTggg                                                     <  7:34246115/100‑1 (MQ=25)
                                                                         gACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTggg                                                     <  7:2373859/100‑1 (MQ=25)
                                                                         gACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTggg                                                     <  7:8882448/100‑1 (MQ=25)
                                                                         gACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTggg                                                     <  8:25370301/100‑1 (MQ=25)
                                                                         gACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCGTGTGTCGCGAAAGGGCAGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTggg                                                     <  8:27770096/100‑1 (MQ=25)
                                                                           cAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGgc                                                   <  8:11138865/100‑1 (MQ=25)
                                                                           cAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGgc                                                   <  8:26454114/100‑1 (MQ=25)
                                                                            aGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGgct                                                  <  8:30184767/100‑1 (MQ=25)
                                                                             gCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGgctg                                                 <  8:49429675/100‑1 (MQ=25)
                                                                               aTAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGgctgct                                               <  7:28363439/100‑1 (MQ=25)
                                                                                tAGCAACACCGCTGAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTa                                              <  8:15555494/100‑1 (MQ=21)
                                                                                tAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTa                                                                    <  7:47245485/78‑1 (MQ=18)
                                                                                tAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTa                                                                    >  8:47245468/1‑78 (MQ=18)
                                                                                tAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTa                                              <  7:39541051/100‑1 (MQ=25)
                                                                                tAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTa                                              <  8:47901169/100‑1 (MQ=25)
                                                                                 aGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAt                                             <  8:16485608/100‑1 (MQ=25)
                                                                                 aGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAt                                             <  8:34810048/100‑1 (MQ=25)
                                                                                   cAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                           <  7:15643289/100‑1 (MQ=25)
                                                                                   cAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                           <  7:29259121/100‑1 (MQ=25)
                                                                                   cAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                           <  7:20057630/100‑1 (MQ=25)
                                                                                      cacCGCTCAGGTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGc                                        <  8:39408619/100‑1 (MQ=25)
                                                                                      cacCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGc                                        <  8:46490278/100‑1 (MQ=25)
                                                                                       accacTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                           <  7:12713061/92‑1 (MQ=21)
                                                                                       acCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGcc                                       <  7:2164179/100‑1 (MQ=25)
                                                                                        ccGCTCAGGTGTGGGAGCGGCCTTGTTTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGccc                                      <  7:51007153/100‑1 (MQ=25)
                                                                                        ccGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCTC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGccc                                      <  8:8439719/100‑1 (MQ=25)
                                                                                        ccGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGccc                                      <  8:44484624/100‑1 (MQ=25)
                                                                                        ccGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGC‑CTC‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGccc                                      <  8:14219739/100‑1 (MQ=25)
                                                                                          gCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                    <  8:31035566/100‑1 (MQ=25)
                                                                                           cTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCttt                                   <  7:10603743/100‑1 (MQ=25)
                                                                                           cTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCttt                                   <  8:50695105/100‑1 (MQ=25)
                                                                                            tCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTc                                  <  7:25033778/100‑1 (MQ=25)
                                                                                              aGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTcgc                                <  7:38618387/100‑1 (MQ=25)
                                                                                              aGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTcgc                                <  7:22430853/100‑1 (MQ=25)
                                                                                              aGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTcgc                                <  8:7574321/100‑1 (MQ=25)
                                                                                                gtgtGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                    <  7:18193215/94‑1 (MQ=21)
                                                                                                gtgtGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGa                              <  7:20599679/100‑1 (MQ=25)
                                                                                                  gggggAGCGGCTTTGTGTCGCGAAAGGGCCGCATAGT‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGaca                            <  7:25982344/98‑1 (MQ=25)
                                                                                                   tgGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGacac                           <  7:9754223/100‑1 (MQ=25)
                                                                                                      gAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAg                        <  7:1726926/100‑1 (MQ=37)
                                                                                                       aGCGGCCTTGTGTTGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAgg                       <  8:45394421/100‑1 (MQ=37)
                                                                                                        gCGGCTTTGTTGCGCAAAAGGGCCGCATAGCGG‑‑‑C‑CTTGGCACTTTCCGTGTGTGTGCAACAACCCTGGGTTTGCTATGCATCCCTTTCGCGACACAAGGc                      <  8:21252284/100‑1 (MQ=255)
                                                                                                        gCGGCTTTGTGTCGCGAAAGGGCCGCATAGT‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTTGGGCTGCTATGCAGCCCTTTCGCGACACAAGGc                      <  7:1879671/100‑1 (MQ=25)
                                                                                                            ccTTGTGTCGCAAAAGGGCCACATAGC‑GGCCC‑C‑‑GGAAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAAGCCcac                  >  8:11441085/1‑100 (MQ=25)
                                                                                                            ccTTGTGTCACGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCCATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCcac                  >  7:32498877/1‑100 (MQ=37)
                                                                                                               tgtgTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACaaa               >  7:51222519/1‑100 (MQ=38)
                                                                                                               tgtgTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACaaa               >  7:26269713/1‑100 (MQ=38)
                                                                                                                 tgtCNCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTAGGCAACAAACCTGTGGCTGCGATGCAGCCCTTTCGCGACACAAGGCCCACAAAgg             <  8:43770275/100‑1 (MQ=25)
                                                                                                                 tgtCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAgg             >  7:7023480/1‑100 (MQ=38)
                                                                                                                  gtCGCGAAAGGGCCGCATAGC‑GGC‑C‑CA‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGa            >  7:9548379/1‑100 (MQ=38)
                                                                                                                     gcgAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATACAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCACACAAAGGAAcg         >  7:14752683/1‑100 (MQ=37)
                                                                                                                      cgAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACcgc        >  8:36858783/1‑100 (MQ=38)
                                                                                                                       gAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACcgcg       >  8:41998845/1‑100 (MQ=38)
                                                                                                                       gAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACcgcg       >  8:35585142/1‑100 (MQ=38)
                                                                                                                       gAAAGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCAAAAAGGACcgcg       >  7:43041773/1‑100 (MQ=38)
                                                                                                                        aaaGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTgg                                                      >  8:603425/1‑52 (MQ=21)
                                                                                                                        aaaGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTc                                  <  8:28647842/72‑1 (MQ=37)
                                                                                                                          aGGGCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAg    >  7:30567864/1‑100 (MQ=38)
                                                                                                                           gggCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCACAAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAgg   >  8:31869786/1‑100 (MQ=37)
                                                                                                                           gggCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAgg   <  7:36858795/100‑1 (MQ=38)
                                                                                                                           gggCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAgg   >  7:8337643/1‑100 (MQ=38)
                                                                                                                            ggCCGCATAGC‑GGCCC‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGc  >  8:2300899/1‑100 (MQ=38)
                                                                                                                                         |||                                                                                        
GCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑G‑‑‑C‑C‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGC  >  AE015451_phaM1/5555473‑5555693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 598 total aligned reads displayed.
CTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATC  >  AE015451_phaM1/5555469‑5555745
                                                                                                                                              |                                                                                                                                            
CTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAAT                                                                                                                                   <  LH00444:90:22JGJLLT3:8:2111:9220:21268/151‑1 (MQ=60)
                  TCGTCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGGGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                                 <  LH00444:58:22357VLT4:2:1322:35457:24085/151‑1 (MQ=60)
                              GCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTG                                                                                                     <  LH00444:58:22357VLT4:2:1242:41307:14854/151‑1 (MQ=60)
                                       CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCG                                                                                                                                              <  LH00444:96:22JGLYLT3:3:2282:11818:26123/101‑1 (MQ=60)
                                       CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCG                                                                                                                                              <  LH00444:96:22JGLYLT3:3:1115:6169:15532/101‑1 (MQ=60)
                                        GGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCG‑‑‑G                                                                                                                                          <  LH00444:62:22GH52LT3:8:2154:33352:25049/101‑1 (MQ=60)
                                           CGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgccc                                                                                                                                          >  LH00444:96:22JGLYLT3:3:1207:6603:22854/1‑97 (MQ=60)
                                            GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgcccc                                                                                                                                         <  LH00444:96:22JGLYLT3:3:1232:29534:23047/101‑6 (MQ=60)
                                            GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgcccc                                                                                                                                         <  LH00444:96:22JGLYLT3:3:1104:41664:13337/101‑6 (MQ=60)
                                            GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgcccc                                                                                                                                         >  LH00444:96:22JGLYLT3:3:1233:28276:8242/1‑96 (MQ=60)
                                            GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgcccc                                                                                                                                         <  LH00444:96:22JGLYLT3:3:2277:42256:2666/101‑6 (MQ=60)
                                             GACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCATGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgccccg                                                                                                                                        >  LH00444:96:22JGLYLT3:3:1257:7592:9251/1‑95 (MQ=60)
                                             GACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgccccg                                                                                                                                        <  LH00444:96:22JGLYLT3:3:2229:29913:14731/101‑7 (MQ=60)
                                             GACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgccccg                                                                                                                                        <  LH00444:96:22JGLYLT3:3:2109:34804:26956/101‑7 (MQ=60)
                                             GACATGAGCAACTCCTTTTGTCATGTGCCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgccccg                                                                                                                                        <  LH00444:96:22JGLYLT3:3:1229:18309:13754/101‑7 (MQ=60)
                                              ACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgccccgg                                                                                                                                       <  LH00444:96:22JGLYLT3:3:2248:33103:27757/101‑8 (MQ=60)
                                               CATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGC                                                                                                                                      <  LH00444:96:22JGLYLT3:3:2111:4292:10934/101‑1 (MQ=60)
                                               CATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTAGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGC                                                                                                                                      >  LH00444:96:22JGLYLT3:3:2137:45502:20467/1‑101 (MQ=60)
                                                ATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCA                                                                                                                                     <  LH00444:96:22JGLYLT3:3:1255:26418:15436/101‑1 (MQ=60)
                                                ATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCA                                                                                                                                     <  LH00444:96:22JGLYLT3:3:2281:43227:29279/101‑1 (MQ=60)
                                                  GAGCAACTCCTTTTGTCATGTGTCGCCGACAGCAGAGCAACACCGCTCAGGTGGGGGAGCGGCCTTGTGTCGAGAAAGGGCCGCAGA‑‑‑GCGGCCCCGGCAAT                                                                                                                                   <  LH00444:96:22JGLYLT3:3:1288:25817:12408/101‑1 (MQ=60)
                                                   gttcagacgtgtgctcttccgatctCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATT                                                                                                                                  <  LH00444:96:22JGLYLT3:3:2113:29127:5166/76‑1 (MQ=48)
                                                   AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAATGGCCGCATA‑‑‑GCGGCCCCGGCAATT                                                                                                                                  <  LH00444:96:22JGLYLT3:3:1237:42136:21909/101‑1 (MQ=60)
                                                   AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAATGGCCGCATA‑‑‑GCGGCCCCGGCAATT                                                                                                                                  <  LH00444:96:22JGLYLT3:3:1237:42117:21909/101‑1 (MQ=60)
                                                   AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATT                                                                                                                                  <  LH00444:96:22JGLYLT3:3:2161:29423:6383/101‑1 (MQ=60)
                                                   AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATT                                                                                                                                  <  LH00444:96:22JGLYLT3:3:1144:24199:20275/101‑1 (MQ=60)
                                                    GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCATGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTT                                                                                                                                 <  LH00444:96:22JGLYLT3:3:2142:10052:10822/101‑1 (MQ=60)
                                                    GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTT                                                                                                                                 >  LH00444:96:22JGLYLT3:3:2139:45566:22502/1‑101 (MQ=60)
                                                    GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTT                                                                                                                                 <  LH00444:96:22JGLYLT3:3:1260:44845:18400/101‑1 (MQ=60)
                                                    GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTT                                                                                                                                 <  LH00444:96:22JGLYLT3:3:1279:27333:11831/101‑1 (MQ=60)
                                                    GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTT                                                                                                                                 <  LH00444:96:22JGLYLT3:3:1147:32206:27805/101‑1 (MQ=60)
                                                      AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCATGTGTGGGAGCGGCCTTGTTTCGCGAAAGGGCCGCAGA‑‑‑GCGGCCCCGGCAATTTCC                                                                                                                               <  LH00444:96:22JGLYLT3:3:2136:43347:13433/101‑1 (MQ=60)
                                                      AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCATGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCC                                                                                                                               <  LH00444:96:22JGLYLT3:3:2136:43403:13433/101‑1 (MQ=60)
                                                      AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCATGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCC                                                                                                                               <  LH00444:96:22JGLYLT3:3:2136:43375:13417/101‑1 (MQ=60)
                                                      AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgccccggcaatagat                                                                                                                               >  LH00444:96:22JGLYLT3:3:2271:32936:22021/1‑86 (MQ=60)
                                                      AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCC                                                                                                                               <  LH00444:96:22JGLYLT3:3:2169:16783:15821/101‑1 (MQ=60)
                                                      AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCC                                                                                                                               <  LH00444:96:22JGLYLT3:3:1223:23477:18961/101‑1 (MQ=60)
                                                      AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCC                                                                                                                               <  LH00444:96:22JGLYLT3:3:2169:16755:15837/101‑1 (MQ=60)
                                                       ACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCG                                                                                                                              <  LH00444:96:22JGLYLT3:3:2268:35728:13754/101‑1 (MQ=60)
                                                       ACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCG                                                                                                                              >  LH00444:96:22JGLYLT3:3:2155:5244:12680/1‑101 (MQ=60)
                                                         TCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCG                                                                                                                            <  LH00444:96:22JGLYLT3:3:1202:43014:25097/101‑1 (MQ=60)
                                                         TCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCG                                                                                                                            <  LH00444:96:22JGLYLT3:3:2219:36302:25226/101‑1 (MQ=60)
                                                         TCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCG                                                                                                                            <  LH00444:96:22JGLYLT3:3:1202:43042:25081/101‑1 (MQ=60)
                                                         TCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCG                                                                                                                            <  LH00444:96:22JGLYLT3:3:2219:36320:25194/101‑1 (MQ=60)
                                                         TCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCG                                                                                                                            <  LH00444:96:22JGLYLT3:3:2128:33278:18961/101‑1 (MQ=60)
                                                           CTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCTCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTG                                                                                                                          <  LH00444:96:22JGLYLT3:3:1245:27897:27132/101‑1 (MQ=60)
                                                            TTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGT                                                                                                                         <  LH00444:96:22JGLYLT3:3:1218:10052:4124/101‑1 (MQ=60)
                                                             TTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTA                                                                                                                        <  LH00444:96:22JGLYLT3:3:1140:27065:10501/101‑1 (MQ=60)
                                                             TTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTA                                                                                                                        <  LH00444:96:22JGLYLT3:3:2219:22294:23479/101‑1 (MQ=60)
                                                              agacgtgtgctcttccgatctATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTAT                                                                                                                       <  LH00444:96:22JGLYLT3:3:1113:38863:7617/80‑1 (MQ=57)
                                                              TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTAT                                                                                                                       <  LH00444:96:22JGLYLT3:3:2245:29469:16397/101‑1 (MQ=60)
                                                              TTGTAATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTAT                                                                                                                       <  LH00444:96:22JGLYLT3:3:1149:42589:4397/101‑1 (MQ=60)
                                                               attggagttcagatgtgtgctcttctgatctgctcggggGTGGGGGCGGCCGTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATG                                                                                                                      <  LH00444:96:22JGLYLT3:3:1271:30920:7633/62‑1 (MQ=50)
                                                               TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCagatcggaa                                                                                                                      >  LH00444:96:22JGLYLT3:3:2234:17301:22037/1‑92 (MQ=60)
                                                               TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATG                                                                                                                      <  LH00444:96:22JGLYLT3:3:2281:42293:20707/101‑1 (MQ=60)
                                                               TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATG                                                                                                                      <  LH00444:96:22JGLYLT3:3:1208:46833:12296/101‑1 (MQ=60)
                                                               TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATG                                                                                                                      <  LH00444:96:22JGLYLT3:3:2148:38595:20483/101‑1 (MQ=60)
                                                               TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATG                                                                                                                      <  LH00444:96:22JGLYLT3:3:1114:50134:29199/101‑1 (MQ=60)
                                                               TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCAGGCAATTTCCGCGTGTATG                                                                                                                      <  LH00444:96:22JGLYLT3:3:2163:35765:25578/101‑1 (MQ=60)
                                                                GTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGC                                                                                                                     <  LH00444:96:22JGLYLT3:3:2127:14250:14475/101‑1 (MQ=60)
                                                                 TCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCA                                                                                                                    <  LH00444:96:22JGLYLT3:3:1141:27472:12680/101‑1 (MQ=60)
                                                                 TCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCA                                                                                                                    <  LH00444:96:22JGLYLT3:3:1130:42071:11414/101‑1 (MQ=60)
                                                                 TCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCA                                                                                                                    <  LH00444:96:22JGLYLT3:3:1259:44956:23271/101‑1 (MQ=60)
                                                                 TCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCA                                                                                                                    <  LH00444:96:22JGLYLT3:3:1169:29839:29023/101‑1 (MQ=60)
                                                                 TCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCA                                                                                                                    <  LH00444:96:22JGLYLT3:3:1141:27425:12664/101‑1 (MQ=60)
                                                                  CATGTGTCGCCGACAGCATAGCAACACCTCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAA                                                                                                                   <  LH00444:96:22JGLYLT3:3:1173:18475:21220/101‑1 (MQ=60)
                                                                   ATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAAC                                                                                                                  <  LH00444:96:22JGLYLT3:3:2129:15932:7169/101‑1 (MQ=60)
                                                                   ATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAAC                                                                                                                  <  LH00444:96:22JGLYLT3:3:1168:5438:24969/101‑1 (MQ=60)
                                                                   ATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAAC                                                                                                                  <  LH00444:96:22JGLYLT3:3:1213:12031:23447/101‑1 (MQ=60)
                                                                    TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                                 <  LH00444:96:22JGLYLT3:3:2182:9460:20275/101‑1 (MQ=60)
                                                                       GTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAAC                                                                                                              <  LH00444:96:22JGLYLT3:3:1161:33648:12456/101‑1 (MQ=60)
                                                                       GTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAAC                                                                                                              <  LH00444:96:22JGLYLT3:3:1234:24272:27901/101‑1 (MQ=60)
                                                                       GTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAAC                                                                                                              <  LH00444:96:22JGLYLT3:3:1239:11707:6992/101‑1 (MQ=60)
                                                                       GTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAAC                                                                                                              <  LH00444:96:22JGLYLT3:3:1114:40814:5614/101‑1 (MQ=60)
                                                                       GTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAAC                                                                                                              <  LH00444:96:22JGLYLT3:3:1161:33694:12440/101‑1 (MQ=60)
                                                                        TCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACC                                                                                                             <  LH00444:96:22JGLYLT3:3:1165:26223:18080/101‑1 (MQ=60)
                                                                         CGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCAGGCAATTTCCGCGTGTATGCAACAAACCT                                                                                                            >  LH00444:96:22JGLYLT3:3:2238:26954:11751/1‑101 (MQ=60)
                                                                          GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                                                           >  LH00444:96:22JGLYLT3:3:1121:3728:19634/1‑101 (MQ=60)
                                                                          GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                                                           <  LH00444:96:22JGLYLT3:3:2131:10070:9251/101‑1 (MQ=60)
                                                                          GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                                                           <  LH00444:96:22JGLYLT3:3:1135:18263:29471/101‑1 (MQ=60)
                                                                          GCCGACAGCACAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCACGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                                                           <  LH00444:96:22JGLYLT3:3:2240:9238:15276/101‑1 (MQ=60)
                                                                           CCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGG                                                                                                          <  LH00444:96:22JGLYLT3:3:1134:48238:16429/101‑1 (MQ=60)
                                                                            CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                                                         <  LH00444:96:22JGLYLT3:3:1119:26223:25610/101‑1 (MQ=60)
                                                                            CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                                                         <  LH00444:96:22JGLYLT3:3:2204:28221:4204/101‑1 (MQ=60)
                                                                            CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                                                         >  LH00444:96:22JGLYLT3:3:1266:26760:9748/1‑101 (MQ=60)
                                                                            CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                                                         <  LH00444:96:22JGLYLT3:3:1231:7935:3596/101‑1 (MQ=60)
                                                                            CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                                                         <  LH00444:96:22JGLYLT3:3:1103:51077:1961/101‑1 (MQ=60)
                                                                             GACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                        <  LH00444:96:22JGLYLT3:3:1115:39103:4285/101‑1 (MQ=60)
                                                                             GACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                        <  LH00444:96:22JGLYLT3:3:1153:51022:6480/101‑1 (MQ=60)
                                                                             GACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                        <  LH00444:96:22JGLYLT3:3:1253:32150:15596/101‑1 (MQ=60)
                                                                             GACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                        <  LH00444:96:22JGLYLT3:3:2149:9617:15612/101‑1 (MQ=60)
                                                                              ACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                       <  LH00444:96:22JGLYLT3:3:1246:8785:4269/101‑1 (MQ=60)
                                                                               CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                                                      <  LH00444:96:22JGLYLT3:3:2217:31337:21332/101‑1 (MQ=60)
                                                                                  GATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCagatcggaagagcacacgtctgaact                                                                                                   >  LH00444:96:22JGLYLT3:3:2101:11578:19009/1‑75 (MQ=43)
                                                                                  CATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCT                                                                                                   <  LH00444:96:22JGLYLT3:3:1129:33537:2138/101‑1 (MQ=60)
                                                                                  CATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCT                                                                                                   <  LH00444:96:22JGLYLT3:3:1173:50679:15051/101‑1 (MQ=60)
                                                                                   ATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTA                                                                                                  <  LH00444:96:22JGLYLT3:3:2111:33981:6303/101‑1 (MQ=60)
                                                                                    TAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAT                                                                                                 <  LH00444:96:22JGLYLT3:3:2201:41285:4413/101‑1 (MQ=60)
                                                                                    TAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAT                                                                                                 <  LH00444:96:22JGLYLT3:3:2170:13565:4509/101‑1 (MQ=60)
                                                                                     AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                                                                <  LH00444:96:22JGLYLT3:3:2171:43597:10181/101‑1 (MQ=60)
                                                                                      GCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                               <  LH00444:96:22JGLYLT3:3:1288:22580:6159/101‑1 (MQ=60)
                                                                                      GCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                               <  LH00444:96:22JGLYLT3:3:2210:9460:23607/101‑1 (MQ=60)
                                                                                       CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                              <  LH00444:96:22JGLYLT3:3:1216:30856:9380/101‑1 (MQ=60)
                                                                                       CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                              <  LH00444:96:22JGLYLT3:3:1118:3765:24248/101‑1 (MQ=60)
                                                                                       CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                              <  LH00444:96:22JGLYLT3:3:2116:30957:24649/101‑1 (MQ=60)
                                                                                       CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                              <  LH00444:96:22JGLYLT3:3:1155:38761:13145/101‑1 (MQ=60)
                                                                                        AACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                             <  LH00444:96:22JGLYLT3:3:2158:38632:14907/101‑1 (MQ=60)
                                                                                        AACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                             <  LH00444:96:22JGLYLT3:3:2209:45992:13786/101‑1 (MQ=60)
                                                                                           ACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                          <  LH00444:96:22JGLYLT3:3:1163:25179:13962/101‑1 (MQ=60)
                                                                                           ACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                          <  LH00444:96:22JGLYLT3:3:1282:25955:1433/101‑1 (MQ=60)
                                                                                            tggagttcagatgtgtgctcttccgatctgaGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                                                         <  LH00444:96:22JGLYLT3:3:1170:7935:26796/70‑1 (MQ=60)
                                                                                            CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                                                         <  LH00444:96:22JGLYLT3:3:2276:29228:20595/101‑1 (MQ=60)
                                                                                            CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                                                         <  LH00444:96:22JGLYLT3:3:2177:23866:5919/101‑1 (MQ=60)
                                                                                            CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                                                         <  LH00444:96:22JGLYLT3:3:1126:49154:3371/101‑1 (MQ=60)
                                                                                              TCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                       <  LH00444:96:22JGLYLT3:3:1241:23228:28686/101‑1 (MQ=60)
                                                                                              GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                       <  LH00444:96:22JGLYLT3:3:2201:21092:2907/101‑1 (MQ=60)
                                                                                              GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                       <  LH00444:96:22JGLYLT3:3:1107:31142:28462/101‑1 (MQ=60)
                                                                                              GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                       <  LH00444:96:22JGLYLT3:3:1102:20870:25850/101‑1 (MQ=60)
                                                                                              GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                       <  LH00444:96:22JGLYLT3:3:2264:6640:19073/101‑1 (MQ=60)
                                                                                              GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                       <  LH00444:96:22JGLYLT3:3:2254:48867:3804/101‑1 (MQ=60)
                                                                                               CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                      <  LH00444:96:22JGLYLT3:3:1230:16617:8258/101‑1 (MQ=60)
                                                                                               CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                      <  LH00444:96:22JGLYLT3:3:2134:39418:15789/101‑1 (MQ=60)
                                                                                               CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                      <  LH00444:96:22JGLYLT3:3:1158:8267:1673/101‑1 (MQ=60)
                                                                                               CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                      <  LH00444:96:22JGLYLT3:3:1135:44152:3964/101‑1 (MQ=60)
                                                                                               CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                      <  LH00444:96:22JGLYLT3:3:2222:16617:20980/101‑1 (MQ=60)
                                                                                               CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                      <  LH00444:96:22JGLYLT3:3:1244:47619:19233/101‑1 (MQ=60)
                                                                                                TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                     <  LH00444:96:22JGLYLT3:3:1153:45788:12856/101‑1 (MQ=60)
                                                                                                TCAGGTGGGGGAGTGGACTTGTGTTGCGAAAGGGCCGCATG‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                     <  LH00444:96:22JGLYLT3:3:2189:27980:12312/101‑1 (MQ=60)
                                                                                                 CAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGC                                                                                    <  LH00444:96:22JGLYLT3:3:1132:47536:28863/101‑1 (MQ=60)
                                                                                                  AGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTagatcggaagagcacacgt                                                                                   >  LH00444:96:22JGLYLT3:3:1281:22580:22053/1‑82 (MQ=60)
                                                                                                  AGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCG                                                                                   <  LH00444:96:22JGLYLT3:3:1255:22053:26235/101‑1 (MQ=60)
                                                                                                  AGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCG                                                                                   <  LH00444:96:22JGLYLT3:3:2181:20075:13193/101‑1 (MQ=60)
                                                                                                    GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGatcggaagagca                                                                                 >  LH00444:96:22JGLYLT3:3:2146:39427:29520/1‑89 (MQ=60)
                                                                                                    GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGatcggaagagca                                                                                 >  LH00444:96:22JGLYLT3:3:1286:26418:8226/1‑89 (MQ=60)
                                                                                                    GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                                                                 <  LH00444:96:22JGLYLT3:3:1106:21942:23319/101‑1 (MQ=60)
                                                                                                    GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                                                                 <  LH00444:96:22JGLYLT3:3:1180:49034:12712/101‑1 (MQ=60)
                                                                                                      GGGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCATAGTGGCC‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACAC                                                                               <  LH00444:96:22JGLYLT3:3:1279:50892:23591/101‑1 (MQ=60)
                                                                                                       TGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACA                                                                              <  LH00444:96:22JGLYLT3:3:1178:44845:12376/101‑1 (MQ=60)
                                                                                                       TGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACA                                                                              <  LH00444:96:22JGLYLT3:3:1158:3718:14491/101‑1 (MQ=60)
                                                                                                       TGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACA                                                                              <  LH00444:96:22JGLYLT3:3:1158:3681:14523/101‑1 (MQ=60)
                                                                                                         agatctgcctgggGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                                                            <  LH00444:96:22JGLYLT3:3:2203:15230:6335/88‑1 (MQ=60)
                                                                                                         GGAGTGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                                                            <  LH00444:96:22JGLYLT3:3:2262:26371:18208/101‑1 (MQ=60)
                                                                                                          GAGCGGCTTTGTGTCGCGAAAGGGCCGCAGA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                                                           <  LH00444:96:22JGLYLT3:3:1144:12687:17214/101‑1 (MQ=60)
                                                                                                          GAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                                                           <  LH00444:96:22JGLYLT3:3:2225:49995:28029/101‑1 (MQ=60)
                                                                                                          GAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                                                           <  LH00444:96:22JGLYLT3:3:2247:44808:10613/101‑1 (MQ=60)
                                                                                                          GAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                                                           <  LH00444:96:22JGLYLT3:3:1259:47434:13754/101‑1 (MQ=60)
                                                                                                          GAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                                                           <  LH00444:96:22JGLYLT3:3:1259:47443:13770/101‑1 (MQ=60)
                                                                                                            GCGGCTTTGTGTCGCGAAAGGGCCGCATAGTGGCC‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTTGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCC                                                                         <  LH00444:96:22JGLYLT3:3:1112:18568:7473/101‑1 (MQ=60)
                                                                                                              GGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCAGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTCTCGCGACACAAGGCCCA                                                                       >  LH00444:96:22JGLYLT3:3:2153:5392:13609/1‑101 (MQ=60)
                                                                                                               GCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGATGTTATGCAGCCCTTTCGCGACACAAGGCCCAC                                                                      >  LH00444:96:22JGLYLT3:3:1133:8369:5438/1‑101 (MQ=60)
                                                                                                               GCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGATGCTATGCAGCCCTTTCGCGACACAAGGCCCAC                                                                      >  LH00444:96:22JGLYLT3:3:2137:32585:28430/1‑101 (MQ=60)
                                                                                                                 CTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAA                                                                    >  LH00444:96:22JGLYLT3:3:2251:20722:17038/1‑101 (MQ=60)
                                                                                                                 CTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAA                                                                    >  LH00444:96:22JGLYLT3:3:1145:9294:2330/1‑101 (MQ=60)
                                                                                                                  TTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAA                                                                   >  LH00444:96:22JGLYLT3:3:2278:14906:17631/1‑101 (MQ=60)
                                                                                                                  TTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAA                                                                   >  LH00444:96:22JGLYLT3:3:1283:22738:11847/1‑101 (MQ=60)
                                                                                                                     TGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCAGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGA                                                                >  LH00444:96:22JGLYLT3:3:1157:37041:6832/1‑101 (MQ=60)
                                                                                                                      GTCGCGAAAGGGCCGCATA‑‑‑GCGGCCACGGCAATTTCCGCGTGTATGCAACAAACTTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAC                                                               <  LH00444:96:22JGLYLT3:3:1246:25687:26700/101‑1 (MQ=60)
                                                                                                                        CGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAagatcggaagagcaca                                                             >  LH00444:96:22JGLYLT3:3:2105:6825:13850/1‑85 (MQ=60)
                                                                                                                          CGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCG                                                           >  LH00444:96:22JGLYLT3:3:1129:42534:5262/1‑101 (MQ=60)
                                                                                                                          CGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCAAAAAGGACCGCG                                                           >  LH00444:96:22JGLYLT3:3:2223:26547:14827/1‑101 (MQ=60)
                                                                                                                           GAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGC                                                          >  LH00444:96:22JGLYLT3:3:1149:19945:27421/1‑101 (MQ=60)
                                                                                                                           GAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGC                                                          >  LH00444:96:22JGLYLT3:3:1220:20676:7056/1‑101 (MQ=60)
                                                                                                                           GAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAAGACCGCGC                                                          >  LH00444:96:22JGLYLT3:3:2272:51225:5486/1‑101 (MQ=60)
                                                                                                                           GAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAAACAAGGCCCACAAAGGACCGCGC                                                          >  LH00444:96:22JGLYLT3:3:1277:37115:2090/1‑101 (MQ=60)
                                                                                                                            AAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCA                                                         >  LH00444:96:22JGLYLT3:3:2118:8721:13033/1‑101 (MQ=60)
                                                                                                                            AAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCA                                                         >  LH00444:96:22JGLYLT3:3:1182:2110:12087/1‑101 (MQ=60)
                                                                                                                             AAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAG                                                        >  LH00444:96:22JGLYLT3:3:2114:9571:28190/1‑101 (MQ=60)
                                                                                                                             AAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCACAG                                                        >  LH00444:96:22JGLYLT3:3:1110:45622:12151/1‑101 (MQ=60)
                                                                                                                              AGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG                                                       >  LH00444:96:22JGLYLT3:3:1276:43246:15949/1‑101 (MQ=60)
                                                                                                                               GGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCAACAAAGGACCGCGCAGGC                                                      >  LH00444:96:22JGLYLT3:3:1157:17588:7825/1‑101 (MQ=60)
                                                                                                                                GGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCT                                                     >  LH00444:96:22JGLYLT3:3:1152:24550:13962/1‑101 (MQ=60)
                                                                                                                                GGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCT                                                     >  LH00444:96:22JGLYLT3:3:1247:50254:21396/1‑101 (MQ=60)
                                                                                                                                 GCCGCATA‑‑‑GCGGCCCAGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATC  >  LH00444:58:22357VLT4:2:1426:23059:18538/1‑151 (MQ=60)
                                                                                                                                  CCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTC                                                   >  LH00444:96:22JGLYLT3:3:1243:10708:4877/1‑101 (MQ=60)
                                                                                                                                   NGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCA                                                  >  LH00444:96:22JGLYLT3:3:2102:33371:14891/1‑101 (MQ=60)
                                                                                                                                   CGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAATGCCCACAAAGGACCGCGCAGGCTTCA                                                  >  LH00444:96:22JGLYLT3:3:1229:9802:7569/1‑101 (MQ=60)
                                                                                                                                   CGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCA                                                  >  LH00444:96:22JGLYLT3:3:1136:2128:3660/1‑101 (MQ=60)
                                                                                                                                    GCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAG                                                 >  LH00444:96:22JGLYLT3:3:1144:51373:23047/1‑101 (MQ=60)
                                                                                                                                     CATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGG                                                >  LH00444:96:22JGLYLT3:3:1210:30292:11222/1‑101 (MQ=60)
                                                                                                                                     CATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGG                                                >  LH00444:96:22JGLYLT3:3:1106:8656:27597/1‑101 (MQ=60)
                                                                                                                                     CATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGA                                                >  LH00444:96:22JGLYLT3:3:2117:29950:26363/1‑101 (MQ=60)
                                                                                                                                      ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCGCAAAGGACCGCGCAGGCTTCAGGC                                               >  LH00444:96:22JGLYLT3:3:2273:28618:2586/1‑101 (MQ=60)
                                                                                                                                      ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTgcggc                                               >  LH00444:96:22JGLYLT3:3:2244:47406:5662/1‑96 (MQ=60)
                                                                                                                                      ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                               >  LH00444:96:22JGLYLT3:3:2276:23699:12007/1‑101 (MQ=60)
                                                                                                                                      ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                               >  LH00444:96:22JGLYLT3:3:2286:22174:16990/1‑101 (MQ=60)
                                                                                                                                      ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                               >  LH00444:96:22JGLYLT3:3:1204:13908:6896/1‑101 (MQ=60)
                                                                                                                                      ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                               >  LH00444:96:22JGLYLT3:3:1157:27952:11623/1‑101 (MQ=60)
                                                                                                                                      ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                               >  LH00444:96:22JGLYLT3:3:1213:7916:18817/1‑101 (MQ=60)
                                                                                                                                      ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                               >  LH00444:96:22JGLYLT3:3:1215:34378:4076/1‑101 (MQ=60)
                                                                                                                                      ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                               >  LH00444:96:22JGLYLT3:3:2107:24152:13337/1‑101 (MQ=60)
                                                                                                                                      ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                               >  LH00444:96:22JGLYLT3:3:2167:40934:24473/1‑101 (MQ=60)
                                                                                                                                      ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                               >  LH00444:96:22JGLYLT3:3:2142:20583:27405/1‑101 (MQ=60)
                                                                                                                                       TA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCC                                              >  LH00444:96:22JGLYLT3:3:2259:35368:12103/1‑101 (MQ=60)
                                                                                                                                       TA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCC                                              >  LH00444:96:22JGLYLT3:3:1269:24855:1513/1‑101 (MQ=60)
                                                                                                                                            GCC‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAA                                         >  LH00444:96:22JGLYLT3:3:2260:19206:22966/1‑101 (MQ=60)
                                                                                                                                             CC‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAAC                                        >  LH00444:96:22JGLYLT3:3:1282:40962:8883/1‑101 (MQ=60)
                                                                                                                                              C‑‑‑CCGGCAATTTCCGTGTGTATGCAACAAGCCTGGGGCTGCTATGCAGCCATTTCGCGACATAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT                                       <  LH00444:96:22JGLYLT3:3:1128:26002:29199/101‑1 (MQ=60)
                                                                                                                                              C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGagatcggaagagcacacgtctg                                       >  LH00444:96:22JGLYLT3:3:1109:12678:22101/1‑79 (MQ=60)
                                                                                                                                              C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT                                       >  LH00444:96:22JGLYLT3:3:2208:47295:1721/1‑101 (MQ=60)
                                                                                                                                              C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT                                       >  LH00444:96:22JGLYLT3:3:2121:22423:12232/1‑101 (MQ=60)
                                                                                                                                              |                                                                                                                                            
CTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATC  >  AE015451_phaM1/5555469‑5555745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑