Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A14 F6 I1 R1	78	2874.5	178397650	99.0%	176613673	98.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	AE015451_phaM1	5,555,608	+GCC	intergenic (‑84/+87)	PP_4887 CDS (conserved protein of unknown function) ← / ← PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	AE015451_phaM1	5,555,608	1	.	G	99.5%	3751.8 / 10.8	1196	intergenic (‑84/+87)	PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)	–/–
Reads supporting (aligned to +/- strand): ref base . (0/6); new base G (213/969); total (214/982)
Fisher's exact test for biased strand distribution p-value = 5.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*	AE015451_phaM1	5,555,608	2	.	C	99.5%	3776.8 / 10.2	1196	intergenic (‑84/+87)	PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)	–/–
Reads supporting (aligned to +/- strand): ref base . (0/6); new base C (214/976); total (214/982)
Fisher's exact test for biased strand distribution p-value = 5.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*	AE015451_phaM1	5,555,608	3	.	C	97.5%	3693.7 / 96.1	1196	intergenic (‑84/+87)	PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)	–/–
Reads supporting (aligned to +/- strand): ref base . (3/27); new base C (211/947); total (214/982)
Fisher's exact test for biased strand distribution p-value = 3.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 1270 total aligned reads displayed.

CTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑G‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCT  >  AE015451_phaM1/5555463‑5555729

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                            ccTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACaaa                                                                                               <  1:137269/149‑1 (MQ=255)

                                               ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑g                                                                                                                              >  6:39252728/1‑99 (MQ=255)

                                                gCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑gg                                                                                                                             <  5:83757442/99‑2 (MQ=255)

                                                gCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑gg                                                                                                                             <  5:31679327/99‑2 (MQ=255)

                                                               tCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCcg                                                                                                              <  6:45628804/99‑1 (MQ=25)

                                                               tCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCcg                                                                                                              >  6:50871333/1‑99 (MQ=25)

                                                                ccTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCcgc                                                                                                             <  6:67942603/99‑1 (MQ=25)

                                                                 cTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCcgcg                                                                                                            <  6:22714519/99‑1 (MQ=25)

                                                                  ttttGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTTTGTCGCGAAAGGGCCGCACAGC‑GGCCCCGGCAATTTCCGCgt                                                                                                           >  5:11856563/1‑99 (MQ=21)

                                                                  ttttGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCgt                                                                                                           <  6:7452841/99‑1 (MQ=25)

                                                                  ttttGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCgt                                                                                                           <  6:55747372/99‑1 (MQ=25)

                                                                    ttGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCgtgt                                                                                                         <  5:6650053/99‑1 (MQ=25)

                                                                    ttGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCgtgt                                                                                                         <  5:27821740/99‑1 (MQ=25)

                                                                     tGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTa                                                                                                        <  5:69269989/99‑1 (MQ=25)

                                                                       tCATTTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGGGTATg                                                                                                      <  6:54317364/99‑1 (MQ=21)

                                                                       tCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATg                                                                                                      <  6:48528203/99‑1 (MQ=25)

                                                                         aTGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGca                                                                                                    <  6:29220417/99‑1 (MQ=25)

                                                                          tgtgTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGcaa                                                                                                   <  6:81227727/99‑1 (MQ=25)

                                                                          tgtgTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGcaa                                                                                                   <  6:82093207/99‑1 (MQ=25)

                                                                          tgtgTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGcaa                                                                                                   <  5:45872491/99‑1 (MQ=25)

                                                                             gtCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGcaacaa                                                                                                <  4:204045/99‑1 (MQ=25)

                                                                              tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACaaa                                                                                               <  5:52385702/99‑1 (MQ=25)

                                                                              tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACaaa                                                                                               <  5:55284689/99‑1 (MQ=25)

                                                                               cGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATGGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAAc                                                                                              <  6:84195580/99‑1 (MQ=25)

                                                                               cGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAAc                                                                                              <  6:17804519/99‑1 (MQ=25)

                                                                               cGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAAc                                                                                              <  5:49567212/99‑1 (MQ=25)

                                                                                gCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAAcc                                                                                             <  6:44250036/99‑1 (MQ=25)

                                                                                gCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCACCGGCAATTTCCGCGTGTATGCAACAAAcc                                                                                             <  5:1495054/99‑1 (MQ=25)

                                                                                 ccGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCt                                                                                            <  6:23874181/99‑1 (MQ=25)

                                                                                  cGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTg                                                                                           <  6:3310179/99‑1 (MQ=25)

                                                                                  cGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTg                                                                                           <  5:23967327/99‑1 (MQ=25)

                                                                                  cGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTg                                                                                           <  5:63363389/99‑1 (MQ=25)

                                                                                  cGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCAGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTg                                                                                           <  5:35121540/99‑1 (MQ=25)

                                                                                   gACAGCAGAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTgg                                                                                          <  5:87087749/99‑1 (MQ=21)

                                                                                    aCAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAAcc                                                                                             <  6:14573685/95‑1 (MQ=25)

                                                                                    aCAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTggg                                                                                         <  6:34553989/99‑1 (MQ=25)

                                                                                     cAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  5:29324996/99‑1 (MQ=25)

                                                                                     cAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  5:41977739/99‑1 (MQ=25)

                                                                                     cAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  5:51131600/99‑1 (MQ=25)

                                                                                     cAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  5:1597588/99‑1 (MQ=25)

                                                                                      aGCATAGCAACACCGCTCGGGTGGGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGgc                                                                                       <  6:88121298/99‑1 (MQ=21)

                                                                                      aGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGgc                                                                                       <  6:35587687/99‑1 (MQ=25)

                                                                                        cATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCGATTTCCGCGTGTATGCAACAAACCTGGGgctg                                                                                     <  6:59406919/99‑1 (MQ=25)

                                                                                        cATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGgctg                                                                                     <  5:19439408/99‑1 (MQ=25)

                                                                                        cATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGgctg                                                                                     <  5:37441607/99‑1 (MQ=25)

                                                                                          tAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCTGCC‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGgctgct                                                                                   <  6:66414705/99‑1 (MQ=25)

                                                                                          tAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGgctgct                                                                                   <  5:36725961/99‑1 (MQ=25)

                                                                                            gCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAt                                                                                 <  5:26052809/99‑1 (MQ=25)

                                                                                            gCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAt                                                                                 <  5:69938829/99‑1 (MQ=25)

                                                                                             cAACACCGCTCAGGTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATg                                                                                <  5:64849411/99‑1 (MQ=25)

                                                                                             cAACACCGCTCAGGTGGGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATg                                                                                <  5:38960729/99‑1 (MQ=25)

                                                                                              aaCACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                                                               <  5:17972300/99‑1 (MQ=25)

                                                                                              aaCACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                                                               <  6:6996667/99‑1 (MQ=25)

                                                                                              aaCACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                                                               <  6:38620882/99‑1 (MQ=25)

                                                                                              aaCACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                                                               <  6:31422601/99‑1 (MQ=25)

                                                                                              aaCACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                                                               <  6:19555376/99‑1 (MQ=25)

                                                                                              aaCACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                                                               <  5:71441/99‑1 (MQ=25)

                                                                                              aaCACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATCTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                                                               <  5:74966437/99‑1 (MQ=21)

                                                                                               acacCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCa                                                                              <  5:80273914/99‑1 (MQ=25)

                                                                                                cacCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGcaa                                                                                                   <  5:33670383/77‑1 (MQ=17)

                                                                                                cacCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAg                                                                             <  6:58203509/99‑1 (MQ=25)

                                                                                                 acCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGc                                                                            <  6:651158/99‑1 (MQ=25)

                                                                                                  ccGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGcc                                                                           <  6:16469102/99‑1 (MQ=25)

                                                                                                   cGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGccc                                                                          <  5:47177051/99‑1 (MQ=25)

                                                                                                    gCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTTGGGCTGCTATGCAGCCCt                                                                         <  6:7349918/99‑1 (MQ=21)

                                                                                                    gCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGccat                                                                         <  5:76715938/99‑3 (MQ=25)

                                                                                                     cTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                                                        <  6:26603728/99‑1 (MQ=25)

                                                                                                     cTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                                                        <  6:27819762/99‑1 (MQ=25)

                                                                                                     cTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                                                        <  5:57383469/99‑1 (MQ=25)

                                                                                                     cTCAGGTGCGGGAGCGGCCTTGTGTCGCGAGAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTTGGGCTGCTATGCAGCCCtt                                                                        <  6:63355342/99‑1 (MQ=21)

                                                                                                      tCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCttt                                                                       <  5:981732/99‑1 (MQ=25)

                                                                                                      tCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCttt                                                                       <  6:75644825/99‑1 (MQ=25)

                                                                                                      tCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCttt                                                                       <  5:44104304/99‑1 (MQ=25)

                                                                                                      tCAGGGGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCttt                                                                       <  6:47827260/99‑1 (MQ=25)

                                                                                                       cAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTc                                                                      <  6:21897731/99‑1 (MQ=25)

                                                                                                        aGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTcg                                                                     <  6:37037624/99‑1 (MQ=25)

                                                                                                          gtgtGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTcgcg                                                                   <  6:85723088/99‑1 (MQ=25)

                                                                                                           tgtgGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGa                                                                  <  6:20390060/99‑1 (MQ=25)

                                                                                                               ggAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAcaca                                                              <  5:1311709/99‑1 (MQ=25)

                                                                                                               ggAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCGTTCGCGAcaca                                                              <  5:60408877/99‑1 (MQ=25)

                                                                                                                gAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCATCCCTTTCGCGACACaa                                                             <  5:81678471/99‑1 (MQ=25)

                                                                                                                gAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACaa                                                             <  5:40734171/99‑1 (MQ=25)

                                                                                                                gAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACaa                                                             <  6:42788165/99‑1 (MQ=25)

                                                                                                                gAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACaa                                                             <  5:78433248/99‑1 (MQ=25)

                                                                                                                         tgtgTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCACCAACACTGGGGCTGCTATGCAACCCTTTCGCGACACAAGGCCCACaa                                                    >  6:18541798/1‑99 (MQ=25)

                                                                                                                         tgtgTCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACaa                                                    >  6:71134341/1‑99 (MQ=38)

                                                                                                                          gtgtCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCACCAAACCTGGGGCTGTTATGCAGCCCTTTCGCGACACAAGGCCCACaaa                                                   >  6:78470249/1‑99 (MQ=37)

                                                                                                                           tgtCGCGAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAg                                                  >  6:40941874/1‑99 (MQ=37)

                                                                                                                            gttgcgAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAgg                                                 <  6:12202998/96‑1 (MQ=38)

                                                                                                                                cgAAAGGGCCGCATAGC‑GGCCCCTGCAATTTCCGCGTGTATGCACCAAACCTGGGGCTGCTATGCAGCACTTTCGCGACACAAGGCCCACAAAGGACcg                                             >  6:46350357/1‑99 (MQ=37)

                                                                                                                                 gAAAGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACcgc                                            >  5:73250443/1‑99 (MQ=38)

                                                                                                                                  aaaGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCCCCGACCCTAGCACTACCATTCAACCCGGTAGCGAAACAGGGAACACAAGGGACcgcg                                           >  6:61868701/1‑99 (MQ=255)

                                                                                                                                  aaaGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACcgcg                                           >  6:77279979/1‑99 (MQ=38)

                                                                                                                                  aaaGGGCCGCATAGC‑GGCCCCGGCAATTTCAGCGTGTATGCAACAAACATGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACcgcg                                           >  5:30542505/1‑99 (MQ=37)

                                                                                                                                   aaGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCgcgc                                          >  5:14033446/1‑99 (MQ=38)

                                                                                                                                   aaGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCgcgc                                          >  5:21486250/1‑99 (MQ=38)

                                                                                                                                    aGGGCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCa                                         >  6:5241935/1‑99 (MQ=38)

                                                                                                                                     gggCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAcc                                              >  5:54383605/1‑93 (MQ=38)

                                                                                                                                     gggCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCATTTCGCGACACAAGGCCCACAAAGGACCGCGCAg                                        >  5:85961504/1‑99 (MQ=38)

                                                                                                                                      ggCCGCATAGC‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAgg                                       >  6:83221971/1‑99 (MQ=38)

|||

CTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑G‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCT  >  AE015451_phaM1/5555463‑5555729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 839 total aligned reads displayed.

GCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT  >  AE015451_phaM1/5555473‑5555708

               CGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAA                                                                           <  LH00444:58:22357VLT4:2:1136:29800:22334/151‑1 (MQ=60)

                  CCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTTTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACC                                                                        <  LH00444:58:22357VLT4:2:1288:8340:5805/151‑1 (MQ=60)

                                   CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG                                                                                                         >  LH00444:96:22JGLYLT3:3:1174:24115:7345/1‑101 (MQ=60)

                                   CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG                                                                                                         <  LH00444:96:22JGLYLT3:3:1225:42090:4909/101‑1 (MQ=60)

                                   CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG                                                                                                         <  LH00444:96:22JGLYLT3:3:2175:52002:8018/101‑1 (MQ=60)

                                   CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGACCGCATAGCG                                                                                                         <  LH00444:96:22JGLYLT3:3:2242:46805:24424/101‑1 (MQ=60)

                                    GGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG‑‑‑N                                                                                                     <  LH00444:96:22JGLYLT3:3:2102:35377:15933/101‑1 (MQ=60)

                                    GGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG‑‑‑G                                                                                                     >  LH00444:96:22JGLYLT3:3:1268:24929:25354/1‑101 (MQ=60)

                                     GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG‑‑‑GC                                                                                                    <  LH00444:96:22JGLYLT3:3:1205:29774:7922/101‑1 (MQ=60)

                                      GCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGgcc                                                                                                      <  LH00444:96:22JGLYLT3:3:1242:8878:12023/101‑4 (MQ=60)

                                       CGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGgccc                                                                                                     <  LH00444:96:22JGLYLT3:3:2141:14425:4204/101‑5 (MQ=60)

                                        GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGgcccc                                                                                                    <  LH00444:96:22JGLYLT3:3:1232:21674:15516/101‑6 (MQ=60)

                                        GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGgcccc                                                                                                    >  LH00444:96:22JGLYLT3:3:1257:26057:12344/1‑96 (MQ=60)

                                        GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGgcccc                                                                                                    <  LH00444:96:22JGLYLT3:3:1136:33408:16045/101‑6 (MQ=60)

                                        GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGgcccc                                                                                                    >  LH00444:96:22JGLYLT3:3:2127:25928:14138/1‑96 (MQ=60)

                                        GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGgcccc                                                                                                    <  LH00444:96:22JGLYLT3:3:2260:2147:22758/101‑6 (MQ=60)

                                        GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGgcccc                                                                                                    <  LH00444:96:22JGLYLT3:3:2105:27185:29584/101‑6 (MQ=60)

                                        GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGgcccc                                                                                                    <  LH00444:96:22JGLYLT3:3:2169:16644:20675/101‑6 (MQ=60)

                                         cgatctAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGgccacg                                                                                                   <  LH00444:96:22JGLYLT3:3:2159:30430:18769/95‑7 (MQ=60)

                                            ATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCA                                                                                                >  LH00444:96:22JGLYLT3:3:1221:38391:4653/1‑101 (MQ=60)

                                            ATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCA                                                                                                <  LH00444:96:22JGLYLT3:3:2143:34203:11366/101‑1 (MQ=60)

                                              atctAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                            <  LH00444:90:22JGJLLT3:8:2216:27897:12776/147‑1 (MQ=60)

                                              GAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAAT                                                                                              <  LH00444:96:22JGLYLT3:3:2238:35488:12023/101‑1 (MQ=60)

                                              GAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAAT                                                                                              <  LH00444:96:22JGLYLT3:3:2213:39714:19890/101‑1 (MQ=60)

                                               AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATT                                                                                             <  LH00444:96:22JGLYLT3:3:1264:13492:12328/101‑1 (MQ=60)

                                               AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATT                                                                                             >  LH00444:96:22JGLYLT3:3:2124:23487:22918/1‑101 (MQ=60)

                                                TCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTT                                                                                            <  LH00444:96:22JGLYLT3:3:1208:2646:15003/101‑1 (MQ=60)

                                                GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTT                                                                                            >  LH00444:96:22JGLYLT3:3:1143:39991:11014/1‑101 (MQ=60)

                                                GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTT                                                                                            <  LH00444:96:22JGLYLT3:3:2243:44105:1609/101‑1 (MQ=60)

                                                GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTT                                                                                            <  LH00444:96:22JGLYLT3:3:1123:28369:3307/101‑1 (MQ=60)

                                                 CAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTC                                                                                           <  LH00444:96:22JGLYLT3:3:1203:44004:3227/101‑1 (MQ=60)

                                                 CAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTC                                                                                           <  LH00444:96:22JGLYLT3:3:1212:46204:15981/101‑1 (MQ=60)

                                                  gtgctcttccgatcTGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCC                                                                                          <  LH00444:96:22JGLYLT3:3:2131:28766:14507/87‑1 (MQ=60)

                                                  AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCC                                                                                          <  LH00444:96:22JGLYLT3:3:2231:9987:16990/101‑1 (MQ=60)

                                                  AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCC                                                                                          <  LH00444:96:22JGLYLT3:3:2208:21758:15019/101‑1 (MQ=60)

                                                  AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCC                                                                                          <  LH00444:96:22JGLYLT3:3:1211:48987:1865/101‑1 (MQ=60)

                                                  AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCC                                                                                          <  LH00444:96:22JGLYLT3:3:2229:29108:8306/101‑1 (MQ=60)

                                                    CTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGC                                                                                        <  LH00444:96:22JGLYLT3:3:1115:28433:3291/101‑1 (MQ=60)

                                                      CCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGT                                                                                      <  LH00444:96:22JGLYLT3:3:1261:14749:20147/101‑1 (MQ=60)

                                                       CTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTG                                                                                     <  LH00444:96:22JGLYLT3:3:1219:48867:7713/101‑1 (MQ=60)

                                                          TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTAT                                                                                  <  LH00444:96:22JGLYLT3:3:1165:9368:12872/101‑1 (MQ=60)

                                                          TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTAT                                                                                  <  LH00444:96:22JGLYLT3:3:1209:47591:2714/101‑1 (MQ=60)

                                                          TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTAT                                                                                  <  LH00444:96:22JGLYLT3:3:2280:22765:3948/101‑1 (MQ=60)

                                                          TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTAT                                                                                  <  LH00444:96:22JGLYLT3:3:2120:12891:1769/101‑1 (MQ=60)

                                                          TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTAT                                                                                  <  LH00444:96:22JGLYLT3:3:2237:47508:6448/101‑1 (MQ=60)

                                                          TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTAT                                                                                  <  LH00444:96:22JGLYLT3:3:2230:16136:22870/101‑1 (MQ=60)

                                                          TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTAT                                                                                  <  LH00444:96:22JGLYLT3:3:1152:32918:17855/101‑1 (MQ=60)

                                                          TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTAT                                                                                  <  LH00444:96:22JGLYLT3:3:1261:25465:15708/101‑1 (MQ=60)

                                                          TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTAT                                                                                  <  LH00444:96:22JGLYLT3:3:2270:26723:1833/101‑1 (MQ=60)

                                                          TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTAT                                                                                  <  LH00444:96:22JGLYLT3:3:1141:22331:14314/101‑1 (MQ=60)

                                                           TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATG                                                                                 <  LH00444:96:22JGLYLT3:3:2253:21896:17247/101‑1 (MQ=60)

                                                           TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATG                                                                                 <  LH00444:96:22JGLYLT3:3:1283:24716:22646/101‑1 (MQ=60)

                                                           NGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATG                                                                                 >  LH00444:96:22JGLYLT3:3:2102:19252:10004/1‑101 (MQ=60)

                                                            GTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCACAGCGGCCCCGGCAACTTCCACGTGTATGC                                                                                >  LH00444:96:22JGLYLT3:3:2160:7186:13770/1‑101 (MQ=60)

                                                               ATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAAC                                                                             <  LH00444:96:22JGLYLT3:3:1135:36034:19185/101‑1 (MQ=60)

                                                               ATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAAC                                                                             <  LH00444:96:22JGLYLT3:3:2217:13436:7233/101‑1 (MQ=60)

                                                                TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCTGGCAATTTCCGCGTGTATGCAACA                                                                            <  LH00444:96:22JGLYLT3:3:2147:37310:26459/101‑1 (MQ=60)

                                                                TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                            <  LH00444:96:22JGLYLT3:3:2284:30634:8707/101‑1 (MQ=60)

                                                                 GTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAA                                                                           <  LH00444:96:22JGLYLT3:3:2227:43606:23303/101‑1 (MQ=60)

                                                                   TTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAAC                                                                         <  LH00444:96:22JGLYLT3:3:2132:24726:5070/101‑1 (MQ=60)

                                                                   TTCGCCGACAGCAGAGAAACACCGTTCAGGGGTGGGAGCGGCCTTGTGTCGAGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAAC                                                                         <  LH00444:96:22JGLYLT3:3:2183:36181:1208/101‑1 (MQ=45)

                                                                   GTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAAC                                                                         <  LH00444:96:22JGLYLT3:3:2212:34249:4172/101‑1 (MQ=60)

                                                                     CGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCT                                                                       <  LH00444:96:22JGLYLT3:3:2148:42940:11254/101‑1 (MQ=60)

                                                                      GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                      <  LH00444:96:22JGLYLT3:3:2108:2590:3628/101‑1 (MQ=60)

                                                                      GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCACCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                      <  LH00444:96:22JGLYLT3:3:1106:12983:15805/101‑1 (MQ=60)

                                                                      GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCACCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                      <  LH00444:96:22JGLYLT3:3:1106:13001:15837/101‑1 (MQ=60)

                                                                       CCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGG                                                                     <  LH00444:96:22JGLYLT3:3:2259:24309:12456/101‑1 (MQ=60)

                                                                        CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                    <  LH00444:96:22JGLYLT3:3:2182:33195:21412/101‑1 (MQ=60)

                                                                        CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                    <  LH00444:96:22JGLYLT3:3:2151:43421:10261/101‑1 (MQ=60)

                                                                        CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                    <  LH00444:96:22JGLYLT3:3:2271:13565:27933/101‑1 (MQ=60)

                                                                        CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                    <  LH00444:96:22JGLYLT3:3:2142:30144:23655/101‑1 (MQ=60)

                                                                        CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                    <  LH00444:96:22JGLYLT3:3:2226:50892:13626/101‑1 (MQ=60)

                                                                        CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCAGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                    <  LH00444:96:22JGLYLT3:3:1254:38558:11799/101‑1 (MQ=60)

                                                                         tacacCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGGATGCAACAAACCTGGGG                                                                   <  LH00444:96:22JGLYLT3:3:2163:26307:21589/96‑1 (MQ=60)

                                                                         GACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                   <  LH00444:96:22JGLYLT3:3:1227:11152:4749/101‑1 (MQ=60)

                                                                         GACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                   <  LH00444:96:22JGLYLT3:3:2137:18226:27549/101‑1 (MQ=60)

                                                                         GACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                   <  LH00444:96:22JGLYLT3:3:1165:28692:12232/101‑1 (MQ=60)

                                                                          gcggtgacgggagttcagacgtgtgctcttccgatCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                  <  LH00444:96:22JGLYLT3:3:1162:6344:26860/66‑1 (MQ=60)

                                                                          ACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                  <  LH00444:96:22JGLYLT3:3:2120:34573:4124/101‑1 (MQ=60)

                                                                          ACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGA                                                                  <  LH00444:96:22JGLYLT3:3:2232:4347:4813/101‑1 (MQ=60)

                                                                           CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                 <  LH00444:96:22JGLYLT3:3:2110:28498:21444/101‑1 (MQ=60)

                                                                           CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                 <  LH00444:96:22JGLYLT3:3:2137:9608:13033/101‑1 (MQ=60)

                                                                           CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                 <  LH00444:96:22JGLYLT3:3:1259:41341:4990/101‑1 (MQ=60)

                                                                           CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                 <  LH00444:96:22JGLYLT3:3:1253:26852:10838/101‑1 (MQ=60)

                                                                            gggaaggtggtgactggagttcagacgtgtgctcttccgatctGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTG                                                                <  LH00444:96:22JGLYLT3:3:2242:26112:23431/58‑1 (MQ=60)

                                                                            AACATAGCAACACCGCTCAGGGGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTG                                                                <  LH00444:96:22JGLYLT3:3:1171:1518:2859/101‑1 (MQ=60)

                                                                             GCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGC                                                               <  LH00444:96:22JGLYLT3:3:2224:50578:7377/101‑1 (MQ=60)

                                                                             GCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGC                                                               <  LH00444:96:22JGLYLT3:3:1235:47906:11655/101‑1 (MQ=60)

                                                                             GCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGC                                                               <  LH00444:96:22JGLYLT3:3:1118:51512:11655/101‑1 (MQ=60)

                                                                             GCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGC                                                               <  LH00444:96:22JGLYLT3:3:1118:50790:13289/101‑1 (MQ=60)

                                                                              CATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCT                                                              <  LH00444:96:22JGLYLT3:3:1262:46352:15244/101‑1 (MQ=60)

                                                                              CATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCT                                                              <  LH00444:96:22JGLYLT3:3:1172:48895:24200/101‑1 (MQ=60)

                                                                              CATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCT                                                              <  LH00444:96:22JGLYLT3:3:2251:36819:1192/101‑1 (MQ=60)

                                                                              CATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCT                                                              <  LH00444:96:22JGLYLT3:3:1245:45807:8979/101‑1 (MQ=60)

                                                                                TAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAT                                                            <  LH00444:96:22JGLYLT3:3:1264:24171:11350/101‑1 (MQ=60)

                                                                                TAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAT                                                            <  LH00444:96:22JGLYLT3:3:2130:13852:2025/101‑1 (MQ=60)

                                                                                 AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTagatcggaagag                                                           >  LH00444:96:22JGLYLT3:3:1272:24938:17839/1‑89 (MQ=60)

                                                                                 AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                           <  LH00444:96:22JGLYLT3:3:1215:50365:18192/101‑1 (MQ=60)

                                                                                 AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGGCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                           <  LH00444:96:22JGLYLT3:3:2117:48460:3996/101‑1 (MQ=60)

                                                                                  GCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                          <  LH00444:96:22JGLYLT3:3:2219:33093:10245/101‑1 (MQ=60)

                                                                                  GCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                          <  LH00444:96:22JGLYLT3:3:2277:18725:20050/101‑1 (MQ=60)

                                                                                  GCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                          <  LH00444:96:22JGLYLT3:3:1234:12863:21172/101‑1 (MQ=60)

                                                                                  GCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                          <  LH00444:96:22JGLYLT3:3:1222:39113:19329/101‑1 (MQ=60)

                                                                                   CAACACCGCTCAGGTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                         <  LH00444:96:22JGLYLT3:3:2190:10967:7441/101‑1 (MQ=60)

                                                                                   CAACACCGCTCAGGTGGGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                         <  LH00444:96:22JGLYLT3:3:1267:32002:23159/101‑1 (MQ=60)

                                                                                    AACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                        <  LH00444:96:22JGLYLT3:3:1164:24014:18737/101‑1 (MQ=60)

                                                                                    AACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                        <  LH00444:96:22JGLYLT3:3:2273:45058:15276/101‑1 (MQ=60)

                                                                                    AACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                        <  LH00444:96:22JGLYLT3:3:1156:35303:21060/101‑1 (MQ=60)

                                                                                    AACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                        <  LH00444:96:22JGLYLT3:3:1140:31281:6848/101‑1 (MQ=60)

                                                                                    AACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                        <  LH00444:96:22JGLYLT3:3:1113:22830:19377/101‑1 (MQ=60)

                                                                                    AACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                        <  LH00444:96:22JGLYLT3:3:2118:24522:18785/101‑1 (MQ=60)

                                                                                     ACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                       <  LH00444:96:22JGLYLT3:3:2257:6686:6688/101‑1 (MQ=60)

                                                                                     ACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                       <  LH00444:96:22JGLYLT3:3:1244:20999:17231/101‑1 (MQ=60)

                                                                                      CACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCC                                                      <  LH00444:96:22JGLYLT3:3:2179:32631:26940/101‑1 (MQ=60)

                                                                                      CACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCC                                                      <  LH00444:96:22JGLYLT3:3:1240:46916:17311/101‑1 (MQ=60)

                                                                                        CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                    <  LH00444:96:22JGLYLT3:3:1210:44706:16750/101‑1 (MQ=60)

                                                                                        CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                    <  LH00444:96:22JGLYLT3:3:1131:33121:22310/101‑1 (MQ=60)

                                                                                         CGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTT                                                   <  LH00444:96:22JGLYLT3:3:2173:25650:19874/101‑1 (MQ=60)

                                                                                         CGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTT                                                   <  LH00444:96:22JGLYLT3:3:1126:21517:6015/101‑1 (MQ=60)

                                                                                         CGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTT                                                   <  LH00444:96:22JGLYLT3:3:2154:26713:4220/101‑1 (MQ=60)

                                                                                         CGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTT                                                   <  LH00444:96:22JGLYLT3:3:2158:34961:8579/101‑1 (MQ=60)

                                                                                         CGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTT                                                   <  LH00444:96:22JGLYLT3:3:2237:22941:13802/101‑1 (MQ=60)

                                                                                         CGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTT                                                   <  LH00444:96:22JGLYLT3:3:1147:28942:24937/101‑1 (MQ=60)

                                                                                          GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                  <  LH00444:96:22JGLYLT3:3:1133:32834:3740/101‑1 (MQ=60)

                                                                                          GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCATTT                                                  <  LH00444:96:22JGLYLT3:3:2244:40758:14395/101‑1 (MQ=60)

                                                                                           CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                 <  LH00444:96:22JGLYLT3:3:2204:10764:16253/101‑1 (MQ=60)

                                                                                           CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                 <  LH00444:96:22JGLYLT3:3:2136:22673:13593/101‑1 (MQ=60)

                                                                                           CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                 <  LH00444:96:22JGLYLT3:3:1152:30245:24312/101‑1 (MQ=60)

                                                                                           CTCAGGTGTGGGAGCGGCCTTGTGGCACGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTAGGCAACAAACCTGGGGCTGCTATGCAGCCCTTCC                                                 <  LH00444:96:22JGLYLT3:3:1239:22506:17823/101‑1 (MQ=60)

                                                                                            TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                <  LH00444:96:22JGLYLT3:3:2189:13658:29023/101‑1 (MQ=60)

                                                                                            TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                <  LH00444:96:22JGLYLT3:3:2184:27130:8819/101‑1 (MQ=60)

                                                                                            TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                <  LH00444:96:22JGLYLT3:3:1247:32982:5727/101‑1 (MQ=60)

                                                                                            TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                <  LH00444:96:22JGLYLT3:3:1104:12216:19698/101‑1 (MQ=60)

                                                                                              AGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCG                                              <  LH00444:96:22JGLYLT3:3:2116:9664:22934/101‑1 (MQ=60)

                                                                                              AGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCG                                              <  LH00444:96:22JGLYLT3:3:1112:41822:6656/101‑1 (MQ=60)

                                                                                                GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                            <  LH00444:96:22JGLYLT3:3:2219:23829:5054/101‑1 (MQ=60)

                                                                                                GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                            <  LH00444:96:22JGLYLT3:3:1229:8905:25049/101‑1 (MQ=60)

                                                                                                GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                            <  LH00444:96:22JGLYLT3:3:2247:15165:3948/101‑1 (MQ=60)

                                                                                                GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                            <  LH00444:96:22JGLYLT3:3:1148:19058:3259/101‑1 (MQ=60)

                                                                                                  GTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACAC                                          <  LH00444:96:22JGLYLT3:3:1157:24920:20211/101‑1 (MQ=60)

                                                                                                     GGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGTAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                       <  LH00444:96:22JGLYLT3:3:1105:31771:25258/101‑1 (MQ=60)

                                                                                                     GGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                       <  LH00444:96:22JGLYLT3:3:2171:17134:15628/101‑1 (MQ=60)

                                                                                                     GGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                       <  LH00444:96:22JGLYLT3:3:2215:30920:26732/101‑1 (MQ=60)

                                                                                                     GGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                       <  LH00444:96:22JGLYLT3:3:1150:23958:14923/101‑1 (MQ=60)

                                                                                                     GGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                       <  LH00444:96:22JGLYLT3:3:2222:44642:9748/101‑1 (MQ=60)

                                                                                                     GGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCAGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                       <  LH00444:96:22JGLYLT3:3:2201:20204:25081/101‑1 (MQ=60)

                                                                                                      GAGTGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                      <  LH00444:96:22JGLYLT3:3:1276:43162:2122/101‑1 (MQ=60)

                                                                                                      GAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCATCCCTTTCGCGACACAAGG                                      <  LH00444:96:22JGLYLT3:3:2262:45159:5070/101‑1 (MQ=60)

                                                                                                      GAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                      <  LH00444:96:22JGLYLT3:3:2234:25502:17086/101‑1 (MQ=60)

                                                                                                      GAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                      <  LH00444:96:22JGLYLT3:3:2250:20389:19538/101‑1 (MQ=60)

                                                                                                      GAGCGGCCTTGGGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                      <  LH00444:96:22JGLYLT3:3:2205:44642:14298/101‑1 (MQ=60)

                                                                                                          GGCTTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGTGCTGCTATGCAGCCCTTTCGCGACACAAGGACCA                                  <  LH00444:96:22JGLYLT3:3:2144:3570:8595/101‑1 (MQ=60)

                                                                                                            CCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACA                                >  LH00444:96:22JGLYLT3:3:1128:49829:17359/1‑101 (MQ=60)

                                                                                                             CTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAA                               >  LH00444:96:22JGLYLT3:3:1235:13935:11174/1‑101 (MQ=60)

                                                                                                              TTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAA                              >  LH00444:96:22JGLYLT3:3:1239:39057:21540/1‑101 (MQ=60)

                                                                                                                 TGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGA                           >  LH00444:96:22JGLYLT3:3:2248:49413:14010/1‑101 (MQ=60)

                                                                                                                  GTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAC                          >  LH00444:96:22JGLYLT3:3:1145:3774:3339/1‑101 (MQ=60)

                                                                                                                  GTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAC                          >  LH00444:96:22JGLYLT3:3:2115:48516:3451/1‑101 (MQ=60)

                                                                                                                      CGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCG                      >  LH00444:96:22JGLYLT3:3:1251:10431:6063/1‑101 (MQ=60)

                                                                                                                      CGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCG                      >  LH00444:96:22JGLYLT3:3:2222:10912:8050/1‑101 (MQ=60)

                                                                                                                      CGAAAGGGCCGCATAGCGGCCCCGGCAATTTCAGCGTGTATGCAACAAACATGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCG                      >  LH00444:96:22JGLYLT3:3:1238:22830:13866/1‑101 (MQ=60)

                                                                                                                       GAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAgatcgg                     >  LH00444:96:22JGLYLT3:3:2111:6354:2073/1‑95 (MQ=60)

                                                                                                                       GAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGC                     >  LH00444:96:22JGLYLT3:3:2152:44947:16942/1‑101 (MQ=60)

                                                                                                                       AAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGC                     >  LH00444:96:22JGLYLT3:3:1266:30181:7793/1‑101 (MQ=60)

                                                                                                                        AAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCA                    >  LH00444:96:22JGLYLT3:3:2220:34332:8867/1‑101 (MQ=60)

                                                                                                                        AAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCA                    >  LH00444:96:22JGLYLT3:3:1227:47887:26652/1‑101 (MQ=60)

                                                                                                                        AAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCA                    >  LH00444:96:22JGLYLT3:3:2138:51761:19522/1‑101 (MQ=60)

                                                                                                                        AAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCA                    >  LH00444:96:22JGLYLT3:3:1154:18124:26828/1‑101 (MQ=60)

                                                                                                                         AAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCagat                   >  LH00444:96:22JGLYLT3:3:2149:18854:20787/1‑97 (MQ=60)

                                                                                                                         AAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAG                   >  LH00444:96:22JGLYLT3:3:1106:6446:27068/1‑101 (MQ=60)

                                                                                                                         AAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAG                   >  LH00444:96:22JGLYLT3:3:1237:15775:12792/1‑101 (MQ=60)

                                                                                                                         AAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCATTTCGCGACACAAGGCCCAAAAAGGACCGCGCAG                   >  LH00444:96:22JGLYLT3:3:2279:15498:20707/1‑101 (MQ=60)

                                                                                                                          AGGGCCGCATAGCGGCCCAGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG                  >  LH00444:96:22JGLYLT3:3:2152:50004:20579/1‑101 (MQ=60)

                                                                                                                              CCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTC              >  LH00444:96:22JGLYLT3:3:1131:16219:20066/1‑101 (MQ=60)

                                                                                                                              CCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTC              >  LH00444:96:22JGLYLT3:3:2165:29644:12760/1‑101 (MQ=60)

                                                                                                                              CCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTC              >  LH00444:96:22JGLYLT3:3:1256:29182:12536/1‑101 (MQ=60)

                                                                                                                               CGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCA             >  LH00444:96:22JGLYLT3:3:1201:16016:26700/1‑101 (MQ=60)

                                                                                                                               CGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCA             >  LH00444:96:22JGLYLT3:3:2217:2942:26283/1‑101 (MQ=60)

                                                                                                                               CGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCA             >  LH00444:96:22JGLYLT3:3:1159:43560:25306/1‑101 (MQ=60)

                                                                                                                               CGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCA             >  LH00444:96:22JGLYLT3:3:1276:30107:21060/1‑101 (MQ=60)

                                                                                                                                GCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAG            >  LH00444:96:22JGLYLT3:3:1149:45594:7265/1‑101 (MQ=60)

                                                                                                                                 CATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGG           >  LH00444:96:22JGLYLT3:3:2186:31753:19682/1‑101 (MQ=60)

                                                                                                                                 CATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGG           >  LH00444:96:22JGLYLT3:3:2257:10339:5711/1‑101 (MQ=60)

                                                                                                                                 CATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGG           >  LH00444:96:22JGLYLT3:3:1260:35497:26972/1‑101 (MQ=60)

                                                                                                                                 CATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGG           >  LH00444:96:22JGLYLT3:3:1155:14592:29584/1‑101 (MQ=60)

                                                                                                                                  ATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC          >  LH00444:96:22JGLYLT3:3:2267:35775:29632/1‑101 (MQ=60)

                                                                                                                                  ATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC          >  LH00444:96:22JGLYLT3:3:2289:39982:2442/1‑101 (MQ=60)

                                                                                                                                  ATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC          >  LH00444:62:22GH52LT3:8:2174:25345:7104/1‑101 (MQ=60)

                                                                                                                                  ATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC          >  LH00444:96:22JGLYLT3:3:2241:6871:2811/1‑101 (MQ=60)

                                                                                                                                  ATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC          >  LH00444:96:22JGLYLT3:3:2180:2748:24697/1‑101 (MQ=60)

                                                                                                                                  ATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC          >  LH00444:96:22JGLYLT3:3:1143:30181:2827/1‑101 (MQ=60)

                                                                                                                                  ATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACATGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC          >  LH00444:96:22JGLYLT3:3:2281:32465:8643/1‑101 (MQ=60)

                                                                                                                                      CC‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAAC   >  LH00444:96:22JGLYLT3:3:1129:37707:20932/1‑101 (MQ=60)

                                                                                                                                       C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTTGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT  >  LH00444:96:22JGLYLT3:3:2110:5235:10742/1‑101 (MQ=60)

                                                                                                                                       C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT  >  LH00444:96:22JGLYLT3:3:1108:4698:19554/1‑101 (MQ=60)

                                                                                                                                       C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT  >  LH00444:96:22JGLYLT3:3:1132:8878:7793/1‑101 (MQ=60)

                                                                                                                                       C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT  >  LH00444:96:22JGLYLT3:3:1132:8915:7793/1‑101 (MQ=60)

                                                                                                                                       C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT  >  LH00444:96:22JGLYLT3:3:1146:49524:14843/1‑101 (MQ=60)

                                                                                                                                       C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT  >  LH00444:96:22JGLYLT3:3:1260:26029:15917/1‑101 (MQ=60)

                                                                                                                                       C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT  >  LH00444:96:22JGLYLT3:3:1209:39834:9364/1‑101 (MQ=60)

GCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT  >  AE015451_phaM1/5555473‑5555708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`