Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A16 F6 I5 R1 67 1716.9 106595685 99.0% 105529728 99.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
JC AE015451_phaM1 5,555,608 +GCC intergenic (‑84/+87) PP_4887 CDS (conserved protein of unknown function) ← / ← PP_4888 CDS (putative methyl‑accepting chemotaxis transducer) –/–

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451_phaM1 = 555560811 (0.010)1095 (0.660)
+GCC		 124/190 2.8 99.0% intergenic (‑84/+87) PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer) –/–
?AE015451_phaM1 5555609 = 11 (0.010)intergenic (‑85/+86) PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer) –/–

Only 100 of 1145 total aligned reads displayed.

GAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451_phaM1/5555477‑5555608
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAG  >  AE015451_phaM1/5555609‑5555739
                                                                                                                                    |||                                                                                                                                   
GAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGC                                                                                                                       <  1:231084/149‑1
                                      acgTGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGTATAGCGGCCCC                                                                                                                                   <  6:44927260/96‑1
                                          GAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTTGCGAAAGGGCCGCATAGCGGCCCCGGCA                                                                                                                               <  5:26029323/99‑1
                                          GAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCA                                                                                                                               <  6:15873204/99‑1
                                          GAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCA                                                                                                                               <  6:6242916/99‑1
                                           AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAA                                                                                                                              <  5:42899275/99‑1
                                           AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAA                                                                                                                              <  6:23555173/99‑1
                                           AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAA                                                                                                                              <  6:51879982/99‑1
                                           AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAA                                                                                                                              <  5:18606777/99‑1
                                            GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAAT                                                                                                                             <  6:10865283/99‑1
                                             CAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATT                                                                                                                            <  5:28966056/99‑1
                                               ACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTC                                                                                                                          <  6:19041221/99‑1
                                                  CCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGC                                                                                                                       >  6:5870558/1‑99
                                                   CTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCG                                                                                                                      <  6:32574034/99‑1
                                                    TTTTGTCATTTTTCGCCGACAGCAGAGCAACACCGCTCAGGTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGT                                                                                                                     <  5:51660289/99‑1
                                                    TTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGT                                                                                                                     >  6:21164437/1‑99
                                                    TTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGT                                                                                                                     >  5:48188157/1‑99
                                                    TTTTGTCATGTGTCGCCGACAGCATAGCAACACCACTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGT                                                                                                                     <  6:30388233/99‑1
                                                      TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGT                                                                                                                   <  5:27655203/99‑1
                                                      TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGT                                                                                                                   <  5:21755473/99‑1
                                                      TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGT                                                                                                                   <  5:9067379/99‑1
                                                       TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCTGCCCCGGCAATTTCCGCGTGTA                                                                                                                  <  6:28560114/99‑1
                                                       TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTA                                                                                                                  <  5:29960623/99‑1
                                                       TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTC                                                                                                                          >  6:31711806/1‑91
                                                       TGTCATGTGTCGCCGACAGCATAGCAACACCCCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTA                                                                                                                  <  5:43407493/99‑1
                                                         TCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATG                                                                                                                <  5:33852956/99‑1
                                                           ATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCA                                                                                                              <  6:7279554/99‑1
                                                           ATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCA                                                                                                              <  5:40870801/99‑1
                                                            TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAA                                                                                                             <  5:15439727/99‑1
                                                            TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATCTCCGCGTGTATGCAA                                                                                                             <  5:22348177/99‑1
                                                              TGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                           <  6:29463611/99‑1
                                                                TCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAA                                                                                                         <  5:36957429/99‑1
                                                                  GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACC                                                                                                       <  5:49148033/99‑1
                                                                  GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACC                                                                                                       <  5:24239412/99‑1
                                                                   CCGACAGCATAGCAACACCGCTCAGGTGTNGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCT                                                                                                      <  5:46456916/99‑1
                                                                   CCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCT                                                                                                      <  5:34736936/99‑1
                                                                    CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                                                     <  5:5198914/99‑1
                                                                     GACAGAAGAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGG                                                                                                    <  6:34324213/99‑1
                                                                      ACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                                                   >  6:27122515/1‑99
                                                                      ACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                                                   <  5:7397910/99‑1
                                                                      ACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                                                   <  5:46045074/99‑1
                                                                       CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                  <  6:36580405/99‑1
                                                                       CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                  <  6:3382433/99‑1
                                                                       CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                  <  6:4938417/99‑1
                                                                        AGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                 <  6:45627714/99‑1
                                                                           agAGCAACACCTCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGC                                                                                              <  5:38960730/97‑1
                                                                           ATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTA                                                                                                                  >  6:42010538/1‑79
                                                                             AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTA                                                                                            <  5:32836431/99‑1
                                                                             AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTA                                                                                            <  5:6518249/99‑1
                                                                             AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTA                                                                                            <  6:35213547/99‑1
                                                                             AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTA                                                                                            <  6:43931735/99‑1
                                                                              GCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAT                                                                                           <  6:3929201/99‑1
                                                                               CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                                                          <  5:18108663/99‑1
                                                                                AACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                         <  6:17374390/99‑1
                                                                                  CACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                       <  5:25103581/99‑1
                                                                                  CACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCT                                                                                                      <  6:1687078/84‑1
                                                                                    CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCTGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCC                                                                                     <  5:44803636/99‑1
                                                                                    CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCC                                                                                     <  6:13872822/99‑1
                                                                                    CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCC                                                                                     <  6:37940043/99‑1
                                                                                    CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCC                                                                                     <  5:3621502/99‑1
                                                                                    CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCC                                                                                     <  5:20473568/99‑1
                                                                                      GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                                                   <  5:21164437/99‑1
                                                                                       CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTT                                                                                  <  5:11322192/99‑1
                                                                                       CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTT                                                                                  <  5:14839483/99‑1
                                                                                       CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTT                                                                                  <  5:16716474/99‑1
                                                                                        TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                 <  6:42552379/99‑1
                                                                                        TCAGGTGGGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                 <  5:13227750/99‑1
                                                                                          AGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                               <  5:20860373/99‑1
                                                                                            GTGTGGGAGCGGCTTTGTTTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCG                                                                             <  6:38244987/99‑1
                                                                                            GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCG                                                                             <  5:37924782/99‑1
                                                                                            GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCG                                                                             <  6:21757082/99‑1
                                                                                             TGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGA                                                                            <  6:18274002/99‑1
                                                                                             TGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                >  6:30984755/1‑95
                                                                                              GTGTGAGCGGCTTTGTTTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                                                           <  6:25888669/99‑1
                                                                                              GTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGTGGCTGCTATGCAGCCCTTTCGCGAC                                                                           <  6:23988543/99‑1
                                                                                                 GGAGCGGCCTTGTGTCGCNAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACA                                                                        <  5:41743504/99‑1
                                                                                                 GGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACA                                                                        <  6:2824777/99‑1
                                                                                                 GGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACA                                                                        <  6:23052887/99‑1
                                                                                                         CTTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                                                          <  5:3538740/73‑1
                                                                                                          TTGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACA                                                               >  6:40025037/1‑99
                                                                                                          TTGTGTCGCGAAAGGGCCGCACAGCGGCCCCGGCAACTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACA                                                               >  6:11839196/1‑99
                                                                                                           TGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTGTGCAGCCCTTTCGCGACACAAGGCCCACAA                                                              >  6:50381864/1‑99
                                                                                                           TGTGTCGCGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAA                                                              >  6:20069518/1‑99
                                                                                                                  CGAAAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCG                                                       >  6:14833433/1‑99
                                                                                                                     AAGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGC                                                    >  5:50447805/1‑99
                                                                                                                      AGGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCA                                                   >  4:112258/1‑99
                                                                                                                       GGGCCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCTACACAAGGCCCACAAAGGACCGCGCAG                                                  <  5:17478245/99‑1
                                                                                                                        GGCCGCCTCGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG                                                 >  5:19244444/1‑99
                                                                                                                          CCGCATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCT                                               <  6:10209182/99‑1
                                                                                                                              ATAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAG                                           >  5:31757413/1‑99
                                                                                                                               TAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGTCCCACAAAGGACCGCGCAGGCTTCAGG                                          >  6:48405320/1‑99
                                                                                                                               TAGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGG                                          >  5:23861571/1‑99
                                                                                                                                AGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                         >  6:41170425/1‑99
                                                                                                                                AGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                         >  5:44042792/1‑99
                                                                                                                                AGCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                         >  6:47607332/1‑99
                                                                                                                                     CCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGA                                    >  6:13105177/1‑99
                                                                                                                                     CCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGA                                    >  5:5518041/1‑99
                                                                                                                                     CCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGA                                    >  5:12511112/1‑99
                                                                                                                                     CCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                         >  5:1407441/1‑94
                                                                                                                                      CCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAA                                   >  6:8291390/1‑99
                                                                                                                                    |||                                                                                                                                   
GAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451_phaM1/5555477‑5555608
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAG  >  AE015451_phaM1/5555609‑5555739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 612 total aligned reads displayed.
GAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTA  >  AE015451_phaM1/5555477‑5555758
                                                                                                                                      |                                                                                                                                                         
GAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGT                                                                                                                                        <  LH00444:58:22357VLT4:2:1451:33142:24925/151‑1 (MQ=60)
                               tgctcttccgatctCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCG                                                                                                                                                           <  LH00444:96:22JGLYLT3:3:1146:31993:14266/87‑1 (MQ=60)
                               CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCG                                                                                                                                                           <  LH00444:96:22JGLYLT3:3:2121:19881:23431/101‑1 (MQ=60)
                               CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCG                                                                                                                                                           <  LH00444:96:22JGLYLT3:3:2143:50596:11254/101‑1 (MQ=60)
                                 GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCG‑‑‑GC                                                                                                                                                      <  LH00444:96:22JGLYLT3:3:1284:44170:1593/101‑1 (MQ=60)
                                    GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgcccc                                                                                                                                                      >  LH00444:96:22JGLYLT3:3:1265:24846:7040/1‑96 (MQ=60)
                                      ACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgccccgg                                                                                                                                                    <  LH00444:96:22JGLYLT3:3:1209:12456:5470/101‑8 (MQ=60)
                                       CATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGC                                                                                                                                                   >  LH00444:96:22JGLYLT3:3:2242:16968:12872/1‑101 (MQ=60)
                                       CATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGC                                                                                                                                                   <  LH00444:96:22JGLYLT3:3:2272:39501:25963/101‑1 (MQ=60)
                                          GAGCAACTCCTTTTTTCGTGTGTTGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAAT                                                                                                                                                <  LH00444:96:22JGLYLT3:3:2229:51632:1929/101‑1 (MQ=60)
                                           ctggagttcagacgtgtgctcttccgatctGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGTGGCC‑‑‑CCGGCAATT                                                                                                                                               <  LH00444:96:22JGLYLT3:3:2165:51382:15564/71‑1 (MQ=43)
                                           AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGgccccggcaagt                                                                                                                                               <  LH00444:96:22JGLYLT3:3:2227:17569:29455/101‑13 (MQ=60)
                                           AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATT                                                                                                                                               >  LH00444:96:22JGLYLT3:3:1280:17070:9300/1‑101 (MQ=60)
                                           AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATT                                                                                                                                               <  LH00444:96:22JGLYLT3:3:1210:22266:19842/101‑1 (MQ=60)
                                           AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATT                                                                                                                                               <  LH00444:96:22JGLYLT3:3:1239:44411:7072/101‑1 (MQ=60)
                                            GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGTCGCATA‑‑‑GCGGCCCCGGCAATTT                                                                                                                                              <  LH00444:96:22JGLYLT3:3:1193:30430:24601/101‑1 (MQ=60)
                                            GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTT                                                                                                                                              <  LH00444:96:22JGLYLT3:3:1193:30467:24569/101‑1 (MQ=60)
                                             CAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTC                                                                                                                                             <  LH00444:96:22JGLYLT3:3:2118:6594:8002/101‑1 (MQ=60)
                                              AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCC                                                                                                                                            <  LH00444:96:22JGLYLT3:3:1179:23181:24248/101‑1 (MQ=60)
                                               ACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCG                                                                                                                                           <  LH00444:96:22JGLYLT3:3:2123:7084:21733/101‑1 (MQ=60)
                                               ACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCG                                                                                                                                           <  LH00444:96:22JGLYLT3:3:2137:19751:21092/101‑1 (MQ=60)
                                               ACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCG                                                                                                                                           <  LH00444:96:22JGLYLT3:3:2182:27694:4253/101‑1 (MQ=60)
                                               ACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCG                                                                                                                                           <  LH00444:96:22JGLYLT3:3:1260:49672:11799/101‑1 (MQ=60)
                                               ACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCG                                                                                                                                           <  LH00444:96:22JGLYLT3:3:2204:51521:15228/101‑1 (MQ=60)
                                                  CCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGT                                                                                                                                        >  LH00444:96:22JGLYLT3:3:2267:8961:18032/1‑101 (MQ=60)
                                                   CTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTG                                                                                                                                       <  LH00444:96:22JGLYLT3:3:1122:33186:15340/101‑1 (MQ=60)
                                                   CTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTG                                                                                                                                       <  LH00444:96:22JGLYLT3:3:1282:3422:26443/101‑1 (MQ=60)
                                                    CTTTGTCATGTTTCGCCGACAGCATAACAACACCGCTCAGGTTTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGT                                                                                                                                      <  LH00444:96:22JGLYLT3:3:2294:7454:1737/101‑1 (MQ=60)
                                                     TTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTA                                                                                                                                     <  LH00444:96:22JGLYLT3:3:1153:40786:4669/101‑1 (MQ=60)
                                                     TTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTA                                                                                                                                     <  LH00444:96:22JGLYLT3:3:2166:3302:27901/101‑1 (MQ=60)
                                                     TTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTA                                                                                                                                     <  LH00444:96:22JGLYLT3:3:1211:46121:22918/101‑1 (MQ=60)
                                                      agacgtgtgctcttccgatctATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTAT                                                                                                                                    <  LH00444:96:22JGLYLT3:3:1228:24171:9620/80‑1 (MQ=57)
                                                      TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTAT                                                                                                                                    <  LH00444:96:22JGLYLT3:3:2172:49015:1561/101‑1 (MQ=60)
                                                      TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTAT                                                                                                                                    <  LH00444:96:22JGLYLT3:3:1167:42580:6528/101‑1 (MQ=60)
                                                      TTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTAT                                                                                                                                    <  LH00444:96:22JGLYLT3:3:2107:41729:28318/101‑1 (MQ=60)
                                                       ctTCATGTGTCGACGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATG                                                                                                                                   <  LH00444:96:22JGLYLT3:3:1139:32270:8851/99‑1 (MQ=60)
                                                       TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATG                                                                                                                                   <  LH00444:96:22JGLYLT3:3:1246:44485:7361/101‑1 (MQ=60)
                                                       TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATG                                                                                                                                   <  LH00444:96:22JGLYLT3:3:1278:38724:13946/101‑1 (MQ=60)
                                                       TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATG                                                                                                                                   <  LH00444:96:22JGLYLT3:3:2217:30467:26011/101‑1 (MQ=60)
                                                         TCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCA                                                                                                                                 <  LH00444:96:22JGLYLT3:3:2156:15886:7153/101‑1 (MQ=60)
                                                           ATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAAC                                                                                                                               <  LH00444:96:22JGLYLT3:3:1282:46491:1320/101‑1 (MQ=60)
                                                           ATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAAC                                                                                                                               <  LH00444:96:22JGLYLT3:3:2217:50892:24008/101‑1 (MQ=60)
                                                           ATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAAC                                                                                                                               <  LH00444:96:22JGLYLT3:3:1102:30773:15933/101‑1 (MQ=60)
                                                           ATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAAC                                                                                                                               <  LH00444:96:22JGLYLT3:3:2212:36006:7569/101‑1 (MQ=60)
                                                            TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                                              <  LH00444:96:22JGLYLT3:3:1216:39741:6864/101‑1 (MQ=60)
                                                            TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                                              <  LH00444:96:22JGLYLT3:3:1266:26325:1881/101‑1 (MQ=60)
                                                            TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                                              <  LH00444:96:22JGLYLT3:3:2253:45344:13113/101‑1 (MQ=60)
                                                            TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                                              <  LH00444:96:22JGLYLT3:3:2237:26427:1064/101‑1 (MQ=60)
                                                            TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                                              <  LH00444:96:22JGLYLT3:3:2237:26390:1064/101‑1 (MQ=60)
                                                            TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGGGTATGCAACA                                                                                                                              <  LH00444:96:22JGLYLT3:3:2253:45354:13129/101‑1 (MQ=60)
                                                             GTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAA                                                                                                                             <  LH00444:96:22JGLYLT3:3:2248:15553:2090/101‑1 (MQ=60)
                                                              TGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAA                                                                                                                            <  LH00444:96:22JGLYLT3:3:1291:8480:29311/101‑1 (MQ=60)
                                                              TGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAAAAAA                                                                                                                            <  LH00444:96:22JGLYLT3:3:1239:21397:20195/101‑1 (MQ=60)
                                                              TGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTAGGCAACAAA                                                                                                                            <  LH00444:96:22JGLYLT3:3:1291:8508:29327/101‑1 (MQ=60)
                                                               GTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAAC                                                                                                                           <  LH00444:96:22JGLYLT3:3:1205:7297:4701/101‑1 (MQ=60)
                                                                TCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACC                                                                                                                          <  LH00444:96:22JGLYLT3:3:2233:42386:5967/101‑1 (MQ=60)
                                                                TCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACC                                                                                                                          <  LH00444:96:22JGLYLT3:3:1155:50624:12520/101‑1 (MQ=60)
                                                                TCGCCGACAACATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACC                                                                                                                          <  LH00444:96:22JGLYLT3:3:2292:4245:27613/101‑1 (MQ=60)
                                                                 CTCCGACAGAAGAGCAACACCGCTCGGGTGTGGGGGTGGCCTTGTTTTGCAAAAGGGCTGCAGG‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCT                                                                                                                         <  LH00444:96:22JGLYLT3:3:2281:10912:21925/101‑1 (MQ=18)
                                                                 CGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCT                                                                                                                         <  LH00444:96:22JGLYLT3:3:2271:4153:20916/101‑1 (MQ=60)
                                                                 CGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCT                                                                                                                         <  LH00444:96:22JGLYLT3:3:1138:19455:28430/101‑1 (MQ=60)
                                                                 CGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCT                                                                                                                         >  LH00444:96:22JGLYLT3:3:1140:45788:7569/1‑101 (MQ=60)
                                                                 CGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCT                                                                                                                         <  LH00444:96:22JGLYLT3:3:1144:37726:29391/101‑1 (MQ=60)
                                                                  GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                                                                        <  LH00444:96:22JGLYLT3:3:2274:8610:23191/101‑1 (MQ=60)
                                                                  GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                                                                        <  LH00444:96:22JGLYLT3:3:2103:27268:2138/101‑1 (MQ=60)
                                                                  GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                                                                        <  LH00444:96:22JGLYLT3:3:1279:1157:16686/101‑1 (MQ=60)
                                                                  GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCACATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                                                                        <  LH00444:96:22JGLYLT3:3:2274:8637:23175/101‑1 (MQ=60)
                                                                  GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCAGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                                                                        <  LH00444:96:22JGLYLT3:3:2153:42774:8402/101‑1 (MQ=60)
                                                                   CCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGG                                                                                                                       <  LH00444:96:22JGLYLT3:3:1182:38364:22037/101‑1 (MQ=60)
                                                                   CCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGG                                                                                                                       <  LH00444:96:22JGLYLT3:3:1133:14888:19586/101‑1 (MQ=60)
                                                                   CCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGG                                                                                                                       <  LH00444:96:22JGLYLT3:3:1129:2276:2410/101‑1 (MQ=60)
                                                                   CCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGG                                                                                                                       <  LH00444:96:22JGLYLT3:3:2148:30560:5823/101‑1 (MQ=60)
                                                                    CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                                                                      <  LH00444:96:22JGLYLT3:3:2204:11402:17487/101‑1 (MQ=60)
                                                                    CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                                                                      <  LH00444:96:22JGLYLT3:3:1128:21184:6271/101‑1 (MQ=60)
                                                                     GACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                                     <  LH00444:96:22JGLYLT3:3:2294:17264:19570/101‑1 (MQ=60)
                                                                      ACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                                    <  LH00444:96:22JGLYLT3:3:2251:11430:22149/101‑1 (MQ=60)
                                                                      ACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                                    <  LH00444:96:22JGLYLT3:3:2251:11457:22165/101‑1 (MQ=60)
                                                                      ACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                                    <  LH00444:96:22JGLYLT3:3:2251:11485:22181/101‑1 (MQ=60)
                                                                      ACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                                    <  LH00444:96:22JGLYLT3:3:2166:21536:26075/101‑1 (MQ=60)
                                                                       atgactattggtgactggagttcagacgtgtgctcttccgatctGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                                                                   <  LH00444:96:22JGLYLT3:3:1106:21573:10693/57‑1 (MQ=60)
                                                                       CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                                                                   <  LH00444:96:22JGLYLT3:3:1122:41147:3243/101‑1 (MQ=60)
                                                                       CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                                                                   <  LH00444:96:22JGLYLT3:3:2208:3422:20098/101‑1 (MQ=60)
                                                                       AAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                                                                   <  LH00444:96:22JGLYLT3:3:1293:1472:28863/101‑1 (MQ=60)
                                                                        AGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTG                                                                                                                  <  LH00444:96:22JGLYLT3:3:1118:26260:22854/101‑1 (MQ=60)
                                                                          CATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCT                                                                                                                <  LH00444:96:22JGLYLT3:3:1227:27897:19345/101‑1 (MQ=60)
                                                                          CATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCT                                                                                                                >  LH00444:96:22JGLYLT3:3:2126:12206:1256/1‑101 (MQ=60)
                                                                          CATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCT                                                                                                                <  LH00444:96:22JGLYLT3:3:2264:43588:20900/101‑1 (MQ=60)
                                                                          CATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCT                                                                                                                >  LH00444:96:22JGLYLT3:3:1110:4717:15516/1‑101 (MQ=60)
                                                                             AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                                                                             <  LH00444:96:22JGLYLT3:3:1274:24402:26299/101‑1 (MQ=60)
                                                                             AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                                                                             <  LH00444:96:22JGLYLT3:3:1274:24374:26315/101‑1 (MQ=60)
                                                                             AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                                                                             <  LH00444:96:22JGLYLT3:3:1257:10292:3419/101‑1 (MQ=60)
                                                                             AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                                                                             <  LH00444:96:22JGLYLT3:3:1148:20593:17391/101‑1 (MQ=60)
                                                                             AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                                                                             <  LH00444:96:22JGLYLT3:3:2187:13334:25162/101‑1 (MQ=60)
                                                                              GCAACACTGCTCAGGTGGGGGAGCGGCCTTGTGTAGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                            <  LH00444:96:22JGLYLT3:3:1169:37097:22790/101‑1 (MQ=60)
                                                                              GCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                            <  LH00444:96:22JGLYLT3:3:1135:16996:26700/101‑1 (MQ=60)
                                                                               CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGTCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                           >  LH00444:96:22JGLYLT3:3:1160:35127:8098/1‑101 (MQ=60)
                                                                               CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGTGGCTGCTATGCA                                                                                                           <  LH00444:96:22JGLYLT3:3:1113:46657:1224/101‑1 (MQ=60)
                                                                               CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                           <  LH00444:96:22JGLYLT3:3:2146:27878:24985/101‑1 (MQ=60)
                                                                               CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                           <  LH00444:96:22JGLYLT3:3:1235:32714:19297/101‑1 (MQ=60)
                                                                               CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                           <  LH00444:96:22JGLYLT3:3:2228:4976:8755/101‑1 (MQ=60)
                                                                               CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                           <  LH00444:96:22JGLYLT3:3:1252:23598:12216/101‑1 (MQ=60)
                                                                               CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                           <  LH00444:96:22JGLYLT3:3:2142:39603:26684/101‑1 (MQ=60)
                                                                               CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                           <  LH00444:96:22JGLYLT3:3:2131:15433:11527/101‑1 (MQ=60)
                                                                               CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                           <  LH00444:96:22JGLYLT3:3:1260:34610:11911/101‑1 (MQ=60)
                                                                                AACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                          <  LH00444:96:22JGLYLT3:3:1287:1194:2650/101‑1 (MQ=60)
                                                                                AACACCGATCGGGGGTGGGAGCGGCCTTGTTTCGCGAAAGGGCCGCATAGCTGCC‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                          <  LH00444:96:22JGLYLT3:3:2221:3950:17231/101‑1 (MQ=60)
                                                                                  CACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCC                                                                                                        <  LH00444:96:22JGLYLT3:3:1252:46204:25242/101‑1 (MQ=60)
                                                                                   tctGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                       <  LH00444:96:22JGLYLT3:3:1202:8628:4220/98‑1 (MQ=60)
                                                                                   tctGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                       <  LH00444:96:22JGLYLT3:3:2162:20195:5166/98‑1 (MQ=60)
                                                                                   ACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                       <  LH00444:96:22JGLYLT3:3:1111:24984:24937/101‑1 (MQ=60)
                                                                                   ACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                       <  LH00444:96:22JGLYLT3:3:1190:36709:5903/101‑1 (MQ=60)
                                                                                   ACCCCTCAGGTGTGGGAGCGGCCTTGTTTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                       <  LH00444:96:22JGLYLT3:3:1196:47184:27965/101‑1 (MQ=60)
                                                                                    CCGCTCGGGTGTGGGAGCGGCCTTGGGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                                                                      <  LH00444:96:22JGLYLT3:3:2190:24726:6448/101‑1 (MQ=60)
                                                                                    CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                                                                      <  LH00444:96:22JGLYLT3:3:1127:18170:21172/101‑1 (MQ=60)
                                                                                    CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAANTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                                                                      <  LH00444:96:22JGLYLT3:3:2214:39686:28943/101‑1 (MQ=60)
                                                                                     CGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTT                                                                                                     <  LH00444:96:22JGLYLT3:3:1148:11587:28734/101‑1 (MQ=60)
                                                                                     CGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTT                                                                                                     <  LH00444:96:22JGLYLT3:3:1148:11605:28734/101‑1 (MQ=60)
                                                                                      GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACagatcggaagagcacacgtctga                                                                                                    >  LH00444:96:22JGLYLT3:3:1232:14222:16349/1‑78 (MQ=53)
                                                                                      GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                                    <  LH00444:96:22JGLYLT3:3:1237:29090:3115/101‑1 (MQ=60)
                                                                                      GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                                    <  LH00444:96:22JGLYLT3:3:2228:32612:14026/101‑1 (MQ=60)
                                                                                      GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTN                                                                                                    <  LH00444:96:22JGLYLT3:3:2102:29108:7345/101‑1 (MQ=60)
                                                                                       CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                                   <  LH00444:96:22JGLYLT3:3:1126:13723:3948/101‑1 (MQ=60)
                                                                                       CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                                   <  LH00444:96:22JGLYLT3:3:1179:38123:25530/101‑1 (MQ=60)
                                                                                       CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                                   <  LH00444:96:22JGLYLT3:3:2185:48793:29183/101‑1 (MQ=60)
                                                                                       CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                                   <  LH00444:96:22JGLYLT3:3:1183:10819:21092/101‑1 (MQ=60)
                                                                                       CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                                   <  LH00444:96:22JGLYLT3:3:1183:10847:21076/101‑1 (MQ=60)
                                                                                       CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                                   <  LH00444:96:22JGLYLT3:3:1203:51715:15500/101‑1 (MQ=60)
                                                                                       CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                                   <  LH00444:96:22JGLYLT3:3:1211:51160:23671/101‑1 (MQ=60)
                                                                                       CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                                   <  LH00444:96:22JGLYLT3:3:1225:8933:18048/101‑1 (MQ=60)
                                                                                        TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                                  <  LH00444:96:22JGLYLT3:3:2178:40037:16990/101‑1 (MQ=60)
                                                                                        TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                                  <  LH00444:96:22JGLYLT3:3:2171:31901:24040/101‑1 (MQ=60)
                                                                                        TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                                  <  LH00444:96:22JGLYLT3:3:2202:45945:21108/101‑1 (MQ=60)
                                                                                        TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                                  <  LH00444:96:22JGLYLT3:3:2251:49172:13177/101‑1 (MQ=60)
                                                                                        TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                                  <  LH00444:96:22JGLYLT3:3:2233:13704:6544/101‑1 (MQ=60)
                                                                                        TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGGATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                                  <  LH00444:96:22JGLYLT3:3:2113:6492:2666/101‑1 (MQ=60)
                                                                                          AGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCT                                                                                                <  LH00444:96:22JGLYLT3:3:1255:28082:11783/101‑1 (MQ=60)
                                                                                          AGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCG                                                                                                <  LH00444:96:22JGLYLT3:3:2115:37291:16013/101‑1 (MQ=60)
                                                                                          AGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCG                                                                                                <  LH00444:96:22JGLYLT3:3:1255:28063:11815/101‑1 (MQ=60)
                                                                                          AGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCG                                                                                                <  LH00444:96:22JGLYLT3:3:1154:40731:1561/101‑1 (MQ=60)
                                                                                          AGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCG                                                                                                <  LH00444:96:22JGLYLT3:3:1255:28054:11799/101‑1 (MQ=60)
                                                                                            GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGTAACAAACTTTGTGCTGCTATGCAGCCCTTTCGCGAC                                                                                              <  LH00444:96:22JGLYLT3:3:2187:6612:2009/101‑1 (MQ=47)
                                                                                            GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTTGGGCTGCTATGCAGCCCTTTCGCGAC                                                                                              <  LH00444:96:22JGLYLT3:3:2187:6594:1977/101‑1 (MQ=60)
                                                                                            GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                                                                              <  LH00444:96:22JGLYLT3:3:1238:24763:4717/101‑1 (MQ=60)
                                                                                            GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                                                                              <  LH00444:96:22JGLYLT3:3:1254:10690:3916/101‑1 (MQ=60)
                                                                                            GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                                                                              <  LH00444:96:22JGLYLT3:3:1256:11217:17359/101‑1 (MQ=60)
                                                                                             TGTGGGAGCGGCCTTGTTTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTAGGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACA                                                                                             <  LH00444:96:22JGLYLT3:3:2276:2267:13770/101‑1 (MQ=60)
                                                                                             TGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACA                                                                                             <  LH00444:96:22JGLYLT3:3:1112:51160:6432/101‑1 (MQ=60)
                                                                                             TGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACA                                                                                             <  LH00444:96:22JGLYLT3:3:1172:12715:15853/101‑1 (MQ=60)
                                                                                                 GGAGCGGCCTTGTGTCGCNAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                                                                         <  LH00444:96:22JGLYLT3:3:2219:22201:1048/101‑1 (MQ=60)
                                                                                                 GGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGATACAAG                                                                                         <  LH00444:96:22JGLYLT3:3:1229:29950:6335/101‑1 (MQ=60)
                                                                                                 GGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                                                                         <  LH00444:96:22JGLYLT3:3:2153:24004:7537/101‑1 (MQ=60)
                                                                                                 GGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                                                                         <  LH00444:96:22JGLYLT3:3:1268:21101:29423/101‑1 (MQ=60)
                                                                                                 GGAGCGGCCTTGTGTCGCGAAAGGGCCGCAGA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                                                                         <  LH00444:96:22JGLYLT3:3:2290:36117:7761/101‑1 (MQ=60)
                                                                                                  GAGCGGCCTTGTGTCGCAAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                                                                        <  LH00444:96:22JGLYLT3:3:1160:10394:20451/101‑1 (MQ=60)
                                                                                                       GCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTGTGCAACAAACCCGGGGCTGCCCTGCCGCCCTTTCGCGACACAAGGCCCAC                                                                                   >  LH00444:96:22JGLYLT3:3:2234:25854:25610/1‑101 (MQ=54)
                                                                                                        CCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACA                                                                                  >  LH00444:96:22JGLYLT3:3:1222:34878:12151/1‑101 (MQ=60)
                                                                                                         CTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAA                                                                                 >  LH00444:96:22JGLYLT3:3:2175:28831:4749/1‑101 (MQ=60)
                                                                                                         CTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAA                                                                                 >  LH00444:96:22JGLYLT3:3:2224:24032:24344/1‑101 (MQ=60)
                                                                                                            GTGTCGAGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGCGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGG                                                                              <  LH00444:96:22JGLYLT3:3:1144:32132:21428/101‑1 (MQ=60)
                                                                                                             TGTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGA                                                                             >  LH00444:96:22JGLYLT3:3:1243:34906:21621/1‑101 (MQ=60)
                                                                                                              GTCGCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAC                                                                            >  LH00444:62:22GH52LT3:8:1273:9164:21236/1‑101 (MQ=60)
                                                                                                                 GCGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAATGACCGC                                                                         >  LH00444:96:22JGLYLT3:3:2147:8526:15420/1‑101 (MQ=60)
                                                                                                                  CGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCG                                                                        >  LH00444:96:22JGLYLT3:3:1234:39242:2730/1‑101 (MQ=60)
                                                                                                                  CGAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCG                                                                        >  LH00444:96:22JGLYLT3:3:2148:25456:23255/1‑101 (MQ=60)
                                                                                                                   GAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGTACCGCGC                                                                       >  LH00444:96:22JGLYLT3:3:2183:28267:15436/1‑101 (MQ=60)
                                                                                                                   GAAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGC                                                                       >  LH00444:96:22JGLYLT3:3:2243:21702:22582/1‑101 (MQ=60)
                                                                                                                    AAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCA                                                                      >  LH00444:96:22JGLYLT3:3:1198:2230:23351/1‑101 (MQ=60)
                                                                                                                    AAAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCA                                                                      >  LH00444:96:22JGLYLT3:3:2134:12040:17182/1‑101 (MQ=60)
                                                                                                                     AAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAG                                                                     >  LH00444:96:22JGLYLT3:3:1137:23570:9091/1‑101 (MQ=60)
                                                                                                                     AAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAG                                                                     >  LH00444:96:22JGLYLT3:3:1284:26954:4605/1‑101 (MQ=60)
                                                                                                                     AAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAG                                                                     >  LH00444:96:22JGLYLT3:3:2288:30208:23319/1‑101 (MQ=60)
                                                                                                                     AAGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAG                                                                     >  LH00444:96:22JGLYLT3:3:1174:39205:5839/1‑101 (MQ=60)
                                                                                                                      AGGGCCGCATA‑‑‑GCGGCCCCGGCAGTTTCCGCGGGTAGGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG                                                                    <  LH00444:96:22JGLYLT3:3:1196:38345:25594/101‑1 (MQ=60)
                                                                                                                      AGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG                                                                    >  LH00444:96:22JGLYLT3:3:1265:50300:14427/1‑101 (MQ=60)
                                                                                                                      AGGGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG                                                                    >  LH00444:96:22JGLYLT3:3:1258:36736:4028/1‑101 (MQ=60)
                                                                                                                        GGCCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCT                                                                  >  LH00444:96:22JGLYLT3:3:2119:25465:16189/1‑101 (MQ=60)
                                                                                                                          CCGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTC                                                                >  LH00444:96:22JGLYLT3:3:2170:37291:15116/1‑101 (MQ=60)
                                                                                                                           CGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTag                                                               >  LH00444:96:22JGLYLT3:3:2294:36496:6816/1‑99 (MQ=60)
                                                                                                                           CGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCA                                                               <  LH00444:96:22JGLYLT3:3:2236:12058:29455/101‑1 (MQ=60)
                                                                                                                           CGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCA                                                               >  LH00444:96:22JGLYLT3:3:2286:51881:20499/1‑101 (MQ=60)
                                                                                                                           CGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCA                                                               >  LH00444:96:22JGLYLT3:3:1237:32733:12856/1‑101 (MQ=60)
                                                                                                                           CGCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCA                                                               >  LH00444:96:22JGLYLT3:3:1246:28933:14795/1‑101 (MQ=60)
                                                                                                                            GCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCCACACACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAG                                                              >  LH00444:96:22JGLYLT3:3:1234:8813:25466/1‑101 (MQ=60)
                                                                                                                            GCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAG                                                              >  LH00444:96:22JGLYLT3:3:1261:11430:24681/1‑101 (MQ=60)
                                                                                                                            GCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAG                                                              >  LH00444:96:22JGLYLT3:3:2158:12530:8835/1‑101 (MQ=60)
                                                                                                                            GCATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAG                                                              >  LH00444:96:22JGLYLT3:3:2140:33925:2939/1‑101 (MQ=60)
                                                                                                                             CATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGG                                                             >  LH00444:96:22JGLYLT3:3:1276:44512:24873/1‑101 (MQ=60)
                                                                                                                             CATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGG                                                             >  LH00444:96:22JGLYLT3:3:1105:33972:1417/1‑101 (MQ=60)
                                                                                                                              ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGagatcggaagagcacacgtctgaactccagtcaccaatagtcatct                                                            >  LH00444:96:22JGLYLT3:3:1214:47064:3788/1‑55 (MQ=60)
                                                                                                                              ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                                            >  LH00444:96:22JGLYLT3:3:1256:13760:8627/1‑101 (MQ=60)
                                                                                                                              ATA‑‑‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                                            >  LH00444:96:22JGLYLT3:3:2224:35867:26620/1‑101 (MQ=60)
                                                                                                                                    GCC‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAA                                                      >  LH00444:96:22JGLYLT3:3:2164:18577:23511/1‑101 (MQ=60)
                                                                                                                                     CC‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAgatcggaagagcacacgtctgaactccagtcaccaata                                                     >  LH00444:96:22JGLYLT3:3:1264:50670:4717/1‑63 (MQ=60)
                                                                                                                                     CC‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGACTTCAGGCCCGGAAC                                                     >  LH00444:96:22JGLYLT3:3:2259:51086:6528/1‑101 (MQ=60)
                                                                                                                                      C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGTAGGCTTCAGGCCCGGAACT                                                    >  LH00444:96:22JGLYLT3:3:1226:25807:24633/1‑101 (MQ=60)
                                                                                                                                      C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTA  <  LH00444:90:22JGJLLT3:8:2240:21674:21476/151‑1 (MQ=60)
                                                                                                                                      C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT                                                    >  LH00444:96:22JGLYLT3:3:1113:41387:26315/1‑101 (MQ=60)
                                                                                                                                      C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT                                                    >  LH00444:96:22JGLYLT3:3:1289:17319:8386/1‑101 (MQ=60)
                                                                                                                                      C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT                                                    >  LH00444:96:22JGLYLT3:3:1163:15572:26668/1‑101 (MQ=60)
                                                                                                                                      C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT                                                    >  LH00444:96:22JGLYLT3:3:2145:9072:13097/1‑101 (MQ=60)
                                                                                                                                      |                                                                                                                                                         
GAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑‑‑GCG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCTA  >  AE015451_phaM1/5555477‑5555758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑