Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A18 F4 I5 R1 74 1140.6 72036873 99.2% 71460578 99.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA AE015451_phaM1 5,555,608 +GCC intergenic (‑84/+87) PP_4887 CDS (conserved protein of unknown function) ← / ← PP_4888 CDS (putative methyl‑accepting chemotaxis transducer) –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AE015451_phaM15,555,6081.G98.8% 1479.8 / 11.0 489intergenic (‑84/+87)PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)–/–
Reads supporting (aligned to +/- strand):  ref base . (5/1);  new base G (88/386);  total (94/395)
Fisher's exact test for biased strand distribution p-value = 1.27e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*AE015451_phaM15,555,6082.C98.8% 1525.1 / 10.8 489intergenic (‑84/+87)PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)–/–
Reads supporting (aligned to +/- strand):  ref base . (5/1);  new base C (88/394);  total (94/395)
Fisher's exact test for biased strand distribution p-value = 1.17e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*AE015451_phaM15,555,6083.C95.5% 1474.5 / 68.4 489intergenic (‑84/+87)PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)–/–
Reads supporting (aligned to +/- strand):  ref base . (7/15);  new base C (87/380);  total (94/395)
Fisher's exact test for biased strand distribution p-value = 1.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 524 total aligned reads displayed.

ACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑G‑‑‑C‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG  >  AE015451_phaM1/5555460‑5555692
                                                                                                                                                      |||                                                                                      
                 gAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑ggccccg                                                                                     >  7:84749/1‑132 (MQ=255)
                                               tCGGGCGGACAGGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                          <  1:155137/149‑1 (MQ=38)
                                                   gCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATATCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑gg                                                                                          <  6:9666231/99‑2 (MQ=255)
                                                   gCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑gg                                                                                          <  6:32730549/99‑2 (MQ=255)
                                                   gCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑gg                                                                                          <  5:5286370/99‑2 (MQ=255)
                                                     ggACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑ggcc                                                                                        <  5:28991999/99‑4 (MQ=255)
                                                      gACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑ggccc                                                                                       <  6:30425178/99‑5 (MQ=255)
                                                      gACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑ggccc                                                                                       <  5:16563450/99‑5 (MQ=255)
                                                      aaCATGAGCAACTCCTTTTTTTATGTTTCGCCGACAGCATATCAACACCGCTCATGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGTGGCTGCTATGCAGCCCtt                                   <  2:378975/148‑1 (MQ=37)
                                                                aCTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTc                                                                           <  6:34331859/99‑1 (MQ=25)
                                                                  tCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCcg                                                                         <  6:29238188/99‑1 (MQ=25)
                                                                   ccTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑gg                                                                                          <  5:29724787/83‑2 (MQ=255)
                                                                   ccTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAgc‑gg                                                                                          >  6:29724785/1‑82 (MQ=255)
                                                                   ccTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCcgc                                                                        <  6:9144745/99‑1 (MQ=25)
                                                                     ttttGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCgt                                                                      <  5:11573424/99‑1 (MQ=25)
                                                                     ttttGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCgt                                                                      <  5:17911789/99‑1 (MQ=25)
                                                                       ttGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCgtgt                                                                    <  6:12266149/99‑1 (MQ=25)
                                                                       ttGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCgtgt                                                                    >  6:11936068/1‑99 (MQ=25)
                                                                       tgttCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCgtgt                                                                    <  6:34910178/96‑1 (MQ=21)
                                                                        tGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTa                                                                   <  6:16494049/99‑1 (MQ=25)
                                                                         gTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTAt                                                                  <  6:6403313/99‑1 (MQ=25)
                                                                         gTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTAt                                                                  <  5:25291355/99‑1 (MQ=25)
                                                                           cATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGc                                                                <  6:4024896/99‑1 (MQ=25)
                                                                            ctgtgCCGCCGACAGCACATCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCGGAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGca                                                               <  6:34553870/98‑1 (MQ=18)
                                                                             tgtgTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGcaa                                                              <  5:12673090/99‑1 (MQ=25)
                                                                             tgtgTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGcaa                                                              <  5:11885502/99‑1 (MQ=25)
                                                                               tgtCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGcaaca                                                            <  5:26723200/99‑1 (MQ=25)
                                                                                 tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACaaa                                                          <  5:13072360/99‑1 (MQ=25)
                                                                                 tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACaaa                                                          <  6:455144/99‑1 (MQ=25)
                                                                                 tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACaaa                                                          <  5:19518695/99‑1 (MQ=25)
                                                                                  cGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCAGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAAc                                                         <  6:25450225/99‑1 (MQ=25)
                                                                                   gCCGACGGCATAGCAACATTGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                        <  6:23726315/99‑1 (MQ=18)
                                                                                    ccGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCt                                                       <  6:15759025/99‑1 (MQ=25)
                                                                                     cGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTg                                                      <  5:10494125/99‑1 (MQ=25)
                                                                                      gACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTgg                                                     <  6:28122493/99‑1 (MQ=25)
                                                                                        cAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAATGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                   <  5:33064137/99‑1 (MQ=25)
                                                                                        cAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                   <  5:6050198/99‑1 (MQ=25)
                                                                                        cAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                   <  5:25433095/99‑1 (MQ=25)
                                                                                        cAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                   <  5:13417536/99‑1 (MQ=25)
                                                                                        cAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTGCCGCGTGTATGCAACAAACCTgggg                                                   <  5:7668011/99‑1 (MQ=21)
                                                                                         aGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGgc                                                  <  6:1351998/99‑1 (MQ=25)
                                                                                             tAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGgctgct                                              <  6:13649464/99‑1 (MQ=25)
                                                                                               gCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAt                                            <  6:19916463/99‑1 (MQ=25)
                                                                                                cAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATg                                           <  5:11936068/99‑1 (MQ=25)
                                                                                                cAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATg                                           <  6:553274/99‑1 (MQ=25)
                                                                                                cAACACCGCTCAGGTGTGGGAGCAGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATg                                           <  5:13210012/99‑1 (MQ=25)
                                                                                                  acacCGCTCAGGTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCa                                         <  5:26533466/99‑1 (MQ=25)
                                                                                                  acacCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCTGCC‑C‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCa                                         <  6:22557419/99‑1 (MQ=25)
                                                                                                  acacCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCa                                         <  5:11105613/99‑1 (MQ=25)
                                                                                                  acacCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCa                                         <  5:20409762/99‑1 (MQ=25)
                                                                                                   cacCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAg                                        <  5:34027615/99‑1 (MQ=25)
                                                                                                    acCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCTGCC‑C‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGc                                       <  5:24587498/99‑1 (MQ=25)
                                                                                                    acCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGgctgc                                               >  6:19259165/1‑91 (MQ=21)
                                                                                                    acCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGc                                       >  5:278027/1‑99 (MQ=25)
                                                                                                    acCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGc                                       >  5:30711146/1‑99 (MQ=25)
                                                                                                     ccGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGcc                                      <  5:22565416/99‑1 (MQ=25)
                                                                                                      cGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGccc                                     <  6:31548359/99‑1 (MQ=25)
                                                                                                       tcTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCt                                    <  6:14983042/98‑1 (MQ=25)
                                                                                                       gCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCt                                    <  6:1317196/99‑1 (MQ=25)
                                                                                                       gCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCt                                    <  5:12361131/99‑1 (MQ=25)
                                                                                                        cTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                   <  5:19343006/99‑1 (MQ=25)
                                                                                                        cTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                   <  6:278027/99‑1 (MQ=25)
                                                                                                        cTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                   <  5:7272449/99‑1 (MQ=25)
                                                                                                        cTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                   <  6:12586515/99‑1 (MQ=25)
                                                                                                        cTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                   <  6:14059367/99‑1 (MQ=25)
                                                                                                        cTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                   <  6:34092496/99‑1 (MQ=25)
                                                                                                        cTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                   <  6:7136808/99‑1 (MQ=25)
                                                                                                         tCAGGTGTGGGAGCGGCCTTGTTTCGCGAAAGGGCCGCATAGC‑GGC‑C‑CAGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCttt                                  <  6:22067673/99‑1 (MQ=25)
                                                                                                         tCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCttt                                  <  6:722483/99‑1 (MQ=25)
                                                                                                         tCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCttt                                  <  5:28209174/99‑1 (MQ=25)
                                                                                                         tCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAACTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCttt                                  <  6:22968761/99‑1 (MQ=21)
                                                                                                          cAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTc                                 <  6:6687892/99‑1 (MQ=25)
                                                                                                          cAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTc                                 <  5:21745718/99‑1 (MQ=25)
                                                                                                           aGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTcg                                <  6:12600168/99‑1 (MQ=25)
                                                                                                           aGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTcg                                <  6:16852688/99‑1 (MQ=25)
                                                                                                              tgtgGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGa                             <  5:4711767/99‑1 (MQ=25)
                                                                                                               gtgGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGTGGCTGCTATGCAGCCCTTTCGCGac                            <  5:9567987/99‑1 (MQ=21)
                                                                                                               gtgGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGac                            <  5:3155161/99‑1 (MQ=25)
                                                                                                                tgGGAGCGGCCTTGTGTCGCGAAAGGTCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGaca                           <  6:32182778/99‑1 (MQ=25)
                                                                                                                  ggAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAcaca                         <  6:28572686/99‑1 (MQ=25)
                                                                                                                  ggAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGC‑CTC‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAcaca                         <  6:8547015/99‑1 (MQ=37)
                                                                                                                   gAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑TGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACaa                        <  6:19672466/99‑1 (MQ=25)
                                                                                                                   gAGCGGCCTTGGGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACaa                        <  5:2283027/99‑1 (MQ=25)
                                                                                                                     gCGGCTTTGTGTCGCGAAAGGGCCGCAGAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCAACACAAgg                      <  6:25690128/99‑1 (MQ=25)
                                                                                                                      cGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTTGGGCTGCTATGCAGCCCTTTCGCGACACAAGGc                     <  6:10724016/99‑1 (MQ=25)
                                                                                                                       ggCTTTGTGTAGCGAAAGGGCCGCATAGC‑GGC‑CAC‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGcc                    <  5:8773139/99‑1 (MQ=37)
                                                                                                                        tccTTGTGTCACGAAGGGGCCTCATAGC‑GGC‑CAC‑GGCACTTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGccc                   <  6:26996013/98‑1 (MQ=25)
                                                                                                                          cTTGTGTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCCACTTCCGCGTGTATGCAACAAACCCGGGGCTGCTATGCAACCCTTTCGCGACACAAAGCCcac                 >  6:21110389/1‑99 (MQ=25)
                                                                                                                            tgtgTCGCGAAAGGGCCGCATAGCAGAC‑C‑C‑GGAAATTTCCGCGTGTCTGCAAAAAACACGGGGCTGCTATGCAGCCCCTTCGCGACCAAAGGCCCaaaa               >  5:25992154/1‑99 (MQ=255)
                                                                                                                            tgtgTCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGTGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACaa               >  6:26719943/1‑99 (MQ=37)
                                                                                                                                tCGCGAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGa           >  6:14282610/1‑99 (MQ=38)
                                                                                                                                 cgcgAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAc          >  5:15010675/1‑99 (MQ=38)
                                                                                                                                    gAAAGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACcgc       >  5:32589225/1‑99 (MQ=38)
                                                                                                                                     aaaGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGTAGCCCTTTCGCGACACAAGGCCCACAAAGGACcgcg      >  5:22221789/1‑99 (MQ=38)
                                                                                                                                     aaaGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACcgcg      >  5:18451818/1‑99 (MQ=38)
                                                                                                                                       aGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCa    >  5:23120580/1‑99 (MQ=38)
                                                                                                                                       aGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCa    >  5:28465041/1‑99 (MQ=38)
                                                                                                                                       aGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCa    >  6:21828431/1‑99 (MQ=38)
                                                                                                                                       aGGGCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCa    >  6:10182556/1‑99 (MQ=38)
                                                                                                                                         ggCCGCATAGC‑GGCCC‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAgg  >  5:14207000/1‑99 (MQ=38)
                                                                                                                                                      |||                                                                                      
ACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑G‑‑‑C‑C‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG  >  AE015451_phaM1/5555460‑5555692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 331 total aligned reads displayed.
GTACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCA  >  AE015451_phaM1/5555458‑5555747
                                                                                                                                                         |                                                                                                                                              
GTACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G                                                                                                                                                <  LH00444:90:22JGJLLT3:8:1106:34277:15340/151‑1 (MQ=60)
GTACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G                                                                                                                                                >  LH00444:90:22JGJLLT3:8:1237:29164:21925/1‑151 (MQ=60)
                                                 TCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                               <  LH00444:58:22357VLT4:2:1395:42513:13803/151‑1 (MQ=60)
                                                 TCGGGCGGACAGGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                               <  LH00444:58:22357VLT4:2:1395:42505:13789/151‑1 (MQ=60)
                                                  ccgatctACATGAGCAACTCATTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G                                                                                                                                                <  LH00444:96:22JGLYLT3:3:1251:6751:12921/94‑1 (MQ=60)
                                                  CGGGCGGACATGAGCAACTCCTTTTTTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G                                                                                                                                                <  LH00444:96:22JGLYLT3:3:2294:1841:10982/101‑1 (MQ=60)
                                                  CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAATGGCCGCATAGC‑‑‑G                                                                                                                                                <  LH00444:96:22JGLYLT3:3:1298:42691:18000/101‑1 (MQ=60)
                                                  CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G                                                                                                                                                <  LH00444:96:22JGLYLT3:3:1212:41461:29071/101‑1 (MQ=60)
                                                  CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G                                                                                                                                                <  LH00444:96:22JGLYLT3:3:1187:19474:21540/101‑1 (MQ=60)
                                                  CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G                                                                                                                                                <  LH00444:96:22JGLYLT3:3:2243:34342:17855/101‑1 (MQ=60)
                                                  CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G                                                                                                                                                <  LH00444:96:22JGLYLT3:3:1242:44392:14891/101‑1 (MQ=60)
                                                  CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCATTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G                                                                                                                                                <  LH00444:96:22JGLYLT3:3:1159:18725:6976/101‑1 (MQ=60)
                                                  CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAAAACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G                                                                                                                                                <  LH00444:96:22JGLYLT3:3:1240:12280:8178/101‑1 (MQ=60)
                                                   GGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGACGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G‑‑‑G                                                                                                                                            <  LH00444:96:22JGLYLT3:3:1164:23699:6752/101‑1 (MQ=60)
                                                     GCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑Ggcc                                                                                                                                             <  LH00444:96:22JGLYLT3:3:1246:1980:2794/101‑4 (MQ=60)
                                                       GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑Ggcccc                                                                                                                                           <  LH00444:96:22JGLYLT3:3:2228:26584:8931/101‑6 (MQ=60)
                                                       GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑Ggcccc                                                                                                                                           <  LH00444:96:22JGLYLT3:3:2228:26575:8915/101‑6 (MQ=60)
                                                       GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑Ggcccc                                                                                                                                           <  LH00444:96:22JGLYLT3:3:2228:26556:8883/101‑6 (MQ=60)
                                                       GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑Ggcccc                                                                                                                                           <  LH00444:96:22JGLYLT3:3:2220:10912:10453/101‑6 (MQ=60)
                                                       GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTag                                                                                         >  LH00444:90:22JGJLLT3:8:1186:16737:29103/1‑149 (MQ=60)
                                                       GGACATGAGCAACTCCTTNTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑Ggcccc                                                                                                                                           <  LH00444:96:22JGLYLT3:3:1169:16885:1064/101‑6 (MQ=60)
                                                        GACATGAGCAACTCCTTTTTTCATGTGTCGCCGACAGCAGAGCAACACCGCCCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑Ggccccg                                                                                                                                          <  LH00444:96:22JGLYLT3:3:2106:2442:27821/101‑7 (MQ=60)
                                                         ACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑Ggccccgg                                                                                                                                         <  LH00444:96:22JGLYLT3:3:1168:15073:2794/101‑8 (MQ=60)
                                                         ACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑Ggccccgg                                                                                                                                         <  LH00444:96:22JGLYLT3:3:1116:35544:3884/101‑8 (MQ=60)
                                                         ACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGGGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑Ggccccgg                                                                                                                                         <  LH00444:96:22JGLYLT3:3:1204:13556:7986/101‑8 (MQ=60)
                                                           ATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCA                                                                                                                                       <  LH00444:96:22JGLYLT3:3:2238:46759:25722/101‑1 (MQ=60)
                                                           ATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCA                                                                                                                                       <  LH00444:96:22JGLYLT3:3:2238:46750:25738/101‑1 (MQ=60)
                                                           ATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCA                                                                                                                                       <  LH00444:96:22JGLYLT3:3:2238:46741:25754/101‑1 (MQ=60)
                                                              agatttgataatgtgactggagttcagacgtgtgctcttccgatCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGACCCGGCAATT                                                                                                                                    <  LH00444:96:22JGLYLT3:3:1145:19409:25145/57‑1 (MQ=11)
                                                              AGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATT                                                                                                                                    <  LH00444:96:22JGLYLT3:3:1152:17097:23383/101‑1 (MQ=60)
                                                               GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTT                                                                                                                                   <  LH00444:96:22JGLYLT3:3:2252:41618:18256/101‑1 (MQ=60)
                                                               GCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTT                                                                                                                                   <  LH00444:96:22JGLYLT3:3:1264:24051:6752/101‑1 (MQ=60)
                                                               GCAACTCCTTTTGTCATGTGTCGCAGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTT                                                                                                                                   <  LH00444:96:22JGLYLT3:3:1238:50328:1625/101‑1 (MQ=60)
                                                                CAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTC                                                                                                                                  <  LH00444:96:22JGLYLT3:3:2220:45492:9940/101‑1 (MQ=60)
                                                                 AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCC                                                                                                                                 <  LH00444:96:22JGLYLT3:3:2265:20648:29760/101‑1 (MQ=60)
                                                                 AACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCC                                                                                                                                 <  LH00444:96:22JGLYLT3:3:2209:36126:20275/101‑1 (MQ=60)
                                                                 AACTCCTTTTGTCATGTGTCGCCGACAGCAGAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAGAGC‑‑‑GGCCCCGGCAATTTCC                                                                                                                                 <  LH00444:96:22JGLYLT3:3:2132:22238:20082/101‑1 (MQ=60)
                                                                  ACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCG                                                                                                                                <  LH00444:96:22JGLYLT3:3:2175:42191:20916/101‑1 (MQ=60)
                                                                   CTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGC                                                                                                                               <  LH00444:96:22JGLYLT3:3:2137:4735:5614/101‑1 (MQ=60)
                                                                   CTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGC                                                                                                                               <  LH00444:96:22JGLYLT3:3:1115:28563:3323/101‑1 (MQ=60)
                                                                   CTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGC                                                                                                                               <  LH00444:96:22JGLYLT3:3:1141:4504:1625/101‑1 (MQ=60)
                                                                    TCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAATGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCG                                                                                                                              <  LH00444:96:22JGLYLT3:3:2163:15276:18656/101‑1 (MQ=60)
                                                                    TCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACAGCTCAGGTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTGCCGCG                                                                                                                              <  LH00444:96:22JGLYLT3:3:1284:1841:23255/101‑1 (MQ=60)
                                                                      CTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTTGCGAAAGTGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTG                                                                                                                            >  LH00444:96:22JGLYLT3:3:2151:30172:17935/1‑101 (MQ=60)
                                                                      CTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTTGCGAAAGTGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTG                                                                                                                            >  LH00444:96:22JGLYLT3:3:2151:30190:17935/1‑101 (MQ=60)
                                                                       TTTTTTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGGGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGT                                                                                                                           <  LH00444:96:22JGLYLT3:3:1296:19853:3227/101‑1 (MQ=60)
                                                                       TTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGT                                                                                                                           <  LH00444:96:22JGLYLT3:3:1228:11393:6576/101‑1 (MQ=60)
                                                                       TTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGT                                                                                                                           <  LH00444:96:22JGLYLT3:3:1228:11383:6592/101‑1 (MQ=60)
                                                                       TTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGT                                                                                                                           <  LH00444:96:22JGLYLT3:3:1296:19834:3227/101‑1 (MQ=60)
                                                                        TTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTA                                                                                                                          <  LH00444:96:22JGLYLT3:3:2248:14425:5518/101‑1 (MQ=60)
                                                                          TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATG                                                                                                                        <  LH00444:96:22JGLYLT3:3:1125:31817:9540/101‑1 (MQ=60)
                                                                          TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATG                                                                                                                        <  LH00444:96:22JGLYLT3:3:1110:15276:15612/101‑1 (MQ=60)
                                                                          TGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATG                                                                                                                        <  LH00444:96:22JGLYLT3:3:2157:27231:29247/101‑1 (MQ=60)
                                                                           GTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGC                                                                                                                       <  LH00444:96:22JGLYLT3:3:2252:7509:26732/101‑1 (MQ=60)
                                                                           GTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGC                                                                                                                       <  LH00444:96:22JGLYLT3:3:2252:7491:26732/101‑1 (MQ=60)
                                                                           GTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGC                                                                                                                       <  LH00444:96:22JGLYLT3:3:2183:24633:16413/101‑1 (MQ=60)
                                                                            TCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCA                                                                                                                      <  LH00444:96:22JGLYLT3:3:1218:29709:25274/101‑1 (MQ=60)
                                                                             tcTGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAA                                                                                                                     <  LH00444:96:22JGLYLT3:3:2201:9645:22261/99‑1 (MQ=60)
                                                                              ATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTTTGTTGCGAAAGGGGCGCATAGC‑‑‑Ggcccccgcaatttcctcttttcttcaac                                                                                                                    >  LH00444:96:22JGLYLT3:3:2274:44244:28702/1‑73 (MQ=60)
                                                                              ATGTGTCGCAGACAGCATAGCAACACCGCTCAGGCGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAAC                                                                                                                    <  LH00444:96:22JGLYLT3:3:2236:9164:12296/101‑1 (MQ=60)
                                                                               TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                                   <  LH00444:96:22JGLYLT3:3:1239:16376:26523/101‑1 (MQ=60)
                                                                               TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                                   <  LH00444:96:22JGLYLT3:3:1231:42913:15628/101‑1 (MQ=60)
                                                                               TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                                   <  LH00444:96:22JGLYLT3:3:1231:42903:15644/101‑1 (MQ=60)
                                                                               TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                                   >  LH00444:96:22JGLYLT3:3:1225:35266:14843/1‑101 (MQ=60)
                                                                               TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACA                                                                                                                   <  LH00444:96:22JGLYLT3:3:1158:25687:23495/101‑1 (MQ=60)
                                                                                 TGTCGCCGACAGCATAGCAACACCGCTCGGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAA                                                                                                                 <  LH00444:96:22JGLYLT3:3:2191:31050:8114/101‑1 (MQ=60)
                                                                                 TGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAA                                                                                                                 <  LH00444:96:22JGLYLT3:3:2202:25456:13930/101‑1 (MQ=60)
                                                                                  GTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAAC                                                                                                                <  LH00444:96:22JGLYLT3:3:1221:25743:13273/101‑1 (MQ=60)
                                                                                   TCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACC                                                                                                               <  LH00444:96:22JGLYLT3:3:1244:28637:5150/101‑1 (MQ=60)
                                                                                   TCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACC                                                                                                               <  LH00444:96:22JGLYLT3:3:2116:33408:25466/101‑1 (MQ=60)
                                                                                   TCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACC                                                                                                               <  LH00444:96:22JGLYLT3:3:2116:33417:25482/101‑1 (MQ=60)
                                                                                   TCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACC                                                                                                               <  LH00444:96:22JGLYLT3:3:2116:33389:25466/101‑1 (MQ=60)
                                                                                   TCGCCGACAGCAGAACAACACCGCTCAGGTGTGGGATCGGCTTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACC                                                                                                               <  LH00444:96:22JGLYLT3:3:2197:17606:11030/101‑1 (MQ=60)
                                                                                    CGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCT                                                                                                              <  LH00444:96:22JGLYLT3:3:2158:29469:5662/101‑1 (MQ=60)
                                                                                    CGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCT                                                                                                              >  LH00444:96:22JGLYLT3:3:1182:9358:12568/1‑101 (MQ=60)
                                                                                     GCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTG                                                                                                             <  LH00444:96:22JGLYLT3:3:2177:23320:19650/101‑1 (MQ=60)
                                                                                      CCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGG                                                                                                            <  LH00444:96:22JGLYLT3:3:1113:3598:13642/101‑1 (MQ=60)
                                                                                      CCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGG                                                                                                            <  LH00444:96:22JGLYLT3:3:1113:3589:13626/101‑1 (MQ=60)
                                                                                       CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                                                           <  LH00444:96:22JGLYLT3:3:1216:22756:18673/101‑1 (MQ=60)
                                                                                       CGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGG                                                                                                           <  LH00444:96:22JGLYLT3:3:2222:51179:8931/101‑1 (MQ=60)
                                                                                         ACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                         <  LH00444:96:22JGLYLT3:3:1187:38243:15548/101‑1 (MQ=60)
                                                                                          CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                                                        <  LH00444:96:22JGLYLT3:3:1165:50596:25899/101‑1 (MQ=60)
                                                                                          CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                                                        <  LH00444:96:22JGLYLT3:3:1247:41748:24697/101‑1 (MQ=60)
                                                                                          CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                                                        <  LH00444:96:22JGLYLT3:3:1165:50605:25883/101‑1 (MQ=60)
                                                                                          CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                                                        <  LH00444:96:22JGLYLT3:3:2185:18068:3852/101‑1 (MQ=60)
                                                                                          CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                                                        <  LH00444:96:22JGLYLT3:3:2185:18050:3820/101‑1 (MQ=60)
                                                                                          CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCT                                                                                                        <  LH00444:96:22JGLYLT3:3:1173:30190:4990/101‑1 (MQ=60)
                                                                                          CAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTGCCGCGTGTATGCAACAAACCTGGGGCT                                                                                                        <  LH00444:96:22JGLYLT3:3:1183:24605:22069/101‑1 (MQ=60)
                                                                                           AGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAGCAAACCTGGGGCTG                                                                                                       <  LH00444:96:22JGLYLT3:3:2215:35127:3163/101‑1 (MQ=60)
                                                                                           AGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTG                                                                                                       <  LH00444:96:22JGLYLT3:3:1292:12262:22694/101‑1 (MQ=60)
                                                                                           AGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTG                                                                                                       <  LH00444:96:22JGLYLT3:3:2158:33103:16990/101‑1 (MQ=60)
                                                                                            GCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGC                                                                                                      <  LH00444:96:22JGLYLT3:3:1154:2147:2602/101‑1 (MQ=60)
                                                                                             CATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCT                                                                                                     <  LH00444:96:22JGLYLT3:3:2103:46056:14667/101‑1 (MQ=60)
                                                                                               TAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAT                                                                                                   <  LH00444:96:22JGLYLT3:3:1232:25151:1513/101‑1 (MQ=60)
                                                                                               TAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTAT                                                                                                   <  LH00444:96:22JGLYLT3:3:2205:28156:8707/101‑1 (MQ=60)
                                                                                                AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                                                                  <  LH00444:96:22JGLYLT3:3:2115:31355:29568/101‑1 (MQ=60)
                                                                                                AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                                                                  <  LH00444:96:22JGLYLT3:3:2270:6261:12167/101‑1 (MQ=60)
                                                                                                AGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                                                                  <  LH00444:96:22JGLYLT3:3:2229:26427:11414/101‑1 (MQ=60)
                                                                                                AGCAACACCGCTCAGGTGTGGGAGCGGACTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATG                                                                                                  <  LH00444:96:22JGLYLT3:3:2185:13778:21925/101‑1 (MQ=60)
                                                                                                 aaaacaccccccgGGTGTGGGAGTGGCCTTGGTTCGCGAAAGGGCCGCATAGC‑‑‑GTCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                 <  LH00444:96:22JGLYLT3:3:2189:5336:29087/88‑1 (MQ=60)
                                                                                                 GCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                 <  LH00444:96:22JGLYLT3:3:1183:22701:17839/101‑1 (MQ=60)
                                                                                                 GCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                 <  LH00444:96:22JGLYLT3:3:1160:21767:16061/101‑1 (MQ=60)
                                                                                                  CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                <  LH00444:96:22JGLYLT3:3:1250:37679:16974/101‑1 (MQ=60)
                                                                                                  CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                <  LH00444:96:22JGLYLT3:3:2107:46500:28190/101‑1 (MQ=60)
                                                                                                  CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                <  LH00444:96:22JGLYLT3:3:1250:37707:16990/101‑1 (MQ=60)
                                                                                                  CAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                <  LH00444:96:22JGLYLT3:3:1232:39066:2490/101‑1 (MQ=60)
                                                                                                  CAACACCGCTCAGGTGTGGGAGCAGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCA                                                                                                <  LH00444:96:22JGLYLT3:3:1245:15748:18705/101‑1 (MQ=60)
                                                                                                   AACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                               <  LH00444:96:22JGLYLT3:3:1113:32233:11767/101‑1 (MQ=60)
                                                                                                    ACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                              >  LH00444:96:22JGLYLT3:3:2247:51669:24200/1‑101 (MQ=60)
                                                                                                    ACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                              <  LH00444:96:22JGLYLT3:3:2126:41174:29664/101‑1 (MQ=60)
                                                                                                    ACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                              <  LH00444:96:22JGLYLT3:3:1110:33130:5919/101‑1 (MQ=60)
                                                                                                    ACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                              <  LH00444:96:22JGLYLT3:3:2126:41165:29616/101‑1 (MQ=60)
                                                                                                    ACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                              <  LH00444:96:22JGLYLT3:3:1223:24531:6976/101‑1 (MQ=60)
                                                                                                    ACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                              <  LH00444:96:22JGLYLT3:3:2177:2433:27677/101‑1 (MQ=60)
                                                                                                    ACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                              <  LH00444:96:22JGLYLT3:3:2238:17578:12264/101‑1 (MQ=60)
                                                                                                    ACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                              >  LH00444:96:22JGLYLT3:3:1104:11365:1465/1‑101 (MQ=60)
                                                                                                    ACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAGAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                              <  LH00444:96:22JGLYLT3:3:2198:26464:5839/101‑1 (MQ=60)
                                                                                                    ACACCGCTCAGGTGGGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                              <  LH00444:96:22JGLYLT3:3:2198:26445:5871/101‑1 (MQ=60)
                                                                                                    ACACCGCTCAGGTGGGGGAGCGGCCGTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                              <  LH00444:96:22JGLYLT3:3:2198:26427:5871/101‑1 (MQ=60)
                                                                                                     CACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCC                                                                                             <  LH00444:96:22JGLYLT3:3:2285:25317:15516/101‑1 (MQ=60)
                                                                                                      ACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                            <  LH00444:96:22JGLYLT3:3:1241:13565:28863/101‑1 (MQ=60)
                                                                                                       CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTTGGGCTGCTATGCAGCCCT                                                                                           <  LH00444:96:22JGLYLT3:3:1234:13834:4365/101‑1 (MQ=60)
                                                                                                       CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                                                           <  LH00444:96:22JGLYLT3:3:2279:37125:1272/101‑1 (MQ=60)
                                                                                                       CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                                                           <  LH00444:96:22JGLYLT3:3:1125:21027:12216/101‑1 (MQ=60)
                                                                                                       CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                                                           <  LH00444:96:22JGLYLT3:3:2152:15137:3548/101‑1 (MQ=60)
                                                                                                       CCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCT                                                                                           <  LH00444:96:22JGLYLT3:3:1280:31928:1817/101‑1 (MQ=60)
                                                                                                         GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                         <  LH00444:96:22JGLYLT3:3:2243:16349:11382/101‑1 (MQ=60)
                                                                                                         GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                         <  LH00444:96:22JGLYLT3:3:1187:16691:27036/101‑1 (MQ=60)
                                                                                                         GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                         <  LH00444:96:22JGLYLT3:3:1236:32261:17006/101‑1 (MQ=60)
                                                                                                         GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                         <  LH00444:96:22JGLYLT3:3:2243:16376:11398/101‑1 (MQ=60)
                                                                                                         GCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCAGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                         <  LH00444:96:22JGLYLT3:3:1286:51391:15068/101‑1 (MQ=60)
                                                                                                          CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                        <  LH00444:96:22JGLYLT3:3:1239:4939:3211/101‑1 (MQ=60)
                                                                                                          CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                        <  LH00444:96:22JGLYLT3:3:1258:9303:2538/101‑1 (MQ=60)
                                                                                                          CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                        <  LH00444:96:22JGLYLT3:3:2210:25058:23591/101‑1 (MQ=60)
                                                                                                          CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                        <  LH00444:96:22JGLYLT3:3:2201:44568:21028/101‑1 (MQ=60)
                                                                                                          CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTC                                                                                        <  LH00444:96:22JGLYLT3:3:2114:25308:25210/101‑1 (MQ=60)
                                                                                                          CTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTGC                                                                                        <  LH00444:96:22JGLYLT3:3:1179:16321:11751/101‑1 (MQ=60)
                                                                                                           TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                       <  LH00444:96:22JGLYLT3:3:2219:10311:10405/101‑1 (MQ=60)
                                                                                                           TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                       <  LH00444:96:22JGLYLT3:3:1157:21323:13433/101‑1 (MQ=60)
                                                                                                           TCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                       <  LH00444:96:22JGLYLT3:3:1236:34878:23367/101‑1 (MQ=60)
                                                                                                            CAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGC                                                                                      <  LH00444:96:22JGLYLT3:3:2142:26316:21765/101‑1 (MQ=60)
                                                                                                            CAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGC                                                                                      <  LH00444:96:22JGLYLT3:3:2142:26307:21749/101‑1 (MQ=60)
                                                                                                               GTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                                                                   <  LH00444:96:22JGLYLT3:3:2263:41045:16237/101‑1 (MQ=60)
                                                                                                                TGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACA                                                                                  <  LH00444:96:22JGLYLT3:3:1106:40888:10357/101‑1 (MQ=60)
                                                                                                                TGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACA                                                                                  <  LH00444:96:22JGLYLT3:3:1151:41979:9556/101‑1 (MQ=60)
                                                                                                                 GTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATagatcggaagagcacacgtctgaactccagtcacattatc                                                                                 >  LH00444:96:22JGLYLT3:3:2259:44734:22213/1‑61 (MQ=11)
                                                                                                                 GTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGTGGCTGCTATGCAGCCCTTTCGCGACAC                                                                                 <  LH00444:96:22JGLYLT3:3:1206:17846:21348/101‑1 (MQ=60)
                                                                                                                 GTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACAC                                                                                 <  LH00444:96:22JGLYLT3:3:1156:38243:19297/101‑1 (MQ=60)
                                                                                                                 GTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACAC                                                                                 <  LH00444:96:22JGLYLT3:3:1134:37310:22165/101‑1 (MQ=60)
                                                                                                                 GTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACAC                                                                                 <  LH00444:96:22JGLYLT3:3:2105:10200:22326/101‑1 (MQ=60)
                                                                                                                  TGGGAGCGGCCTGGTGTCGCGAAAGGGCCGCATAGC‑‑‑GTCCCCGGCAATTTCCGCGTGGATGCAACAAACCTGGGGCTGCGATGCAGCCCTTTCGCGACACA                                                                                <  LH00444:96:22JGLYLT3:3:2278:44272:24360/101‑1 (MQ=60)
                                                                                                                     GAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                                                             <  LH00444:96:22JGLYLT3:3:2231:18484:17711/101‑1 (MQ=60)
                                                                                                                     GAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                                                             <  LH00444:96:22JGLYLT3:3:1125:22164:13609/101‑1 (MQ=60)
                                                                                                                     GAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                                                             <  LH00444:96:22JGLYLT3:3:1125:22174:13593/101‑1 (MQ=60)
                                                                                                                     GAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                                                             <  LH00444:96:22JGLYLT3:3:1243:6834:18352/101‑1 (MQ=60)
                                                                                                                     GAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGG                                                                             <  LH00444:96:22JGLYLT3:3:2126:38142:18608/101‑1 (MQ=60)
                                                                                                                         GGCTTTGTGTAGCGAAAGGGCCGCATAGC‑‑‑GGCCACGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCA                                                                         <  LH00444:96:22JGLYLT3:3:1195:4902:26892/101‑1 (MQ=60)
                                                                                                                         GGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCAACACAAGGCCCA                                                                         <  LH00444:96:22JGLYLT3:3:1235:12761:28238/101‑1 (MQ=60)
                                                                                                                           CCTTGTGTTGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACA                                                                       >  LH00444:96:22JGLYLT3:3:1294:19206:4413/1‑101 (MQ=60)
                                                                                                                            CTTGTGTCGCGAAAGGGCCGCATAGCAGAC‑‑‑CCGGAAATTTCCGCGTGTCTGCAAAAAACACGGGGCTGCTATGCAGCCCCTTCGCGACCAAAGGCCCAAAA                                                                      >  LH00444:96:22JGLYLT3:3:2191:50226:15292/1‑101 (MQ=29)
                                                                                                                               GTGTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGG                                                                   >  LH00444:96:22JGLYLT3:3:1244:41886:25931/1‑101 (MQ=60)
                                                                                                                                 GTCGCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAC                                                                 >  LH00444:96:22JGLYLT3:3:1264:43024:29119/1‑101 (MQ=60)
                                                                                                                                    GCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGC                                                              >  LH00444:96:22JGLYLT3:3:1269:43615:1657/1‑101 (MQ=60)
                                                                                                                                    GCGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGC                                                              >  LH00444:96:22JGLYLT3:3:2268:46038:28414/1‑101 (MQ=60)
                                                                                                                                     CGAAAGGGCCGCATCGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCAAAAAGGACCGCG                                                             >  LH00444:96:22JGLYLT3:3:2275:25456:6464/1‑101 (MQ=60)
                                                                                                                                     CGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGTAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCG                                                             >  LH00444:96:22JGLYLT3:3:2148:14934:6399/1‑101 (MQ=60)
                                                                                                                                     CGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCG                                                             >  LH00444:96:22JGLYLT3:3:2218:26676:10213/1‑101 (MQ=60)
                                                                                                                                     CGAAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCG                                                             >  LH00444:96:22JGLYLT3:3:2218:27851:14234/1‑101 (MQ=60)
                                                                                                                                       AAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACACGGCCCCCAAAGGACCGCGCA                                                           >  LH00444:96:22JGLYLT3:3:1234:22257:27036/1‑101 (MQ=60)
                                                                                                                                       AAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCA                                                           >  LH00444:96:22JGLYLT3:3:2269:2720:27180/1‑101 (MQ=60)
                                                                                                                                       AAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCA                                                           >  LH00444:96:22JGLYLT3:3:2222:16256:8050/1‑101 (MQ=60)
                                                                                                                                       AAAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAAACAAGGACCACAAAGGAACGCGCA                                                           >  LH00444:96:22JGLYLT3:3:2222:16219:8050/1‑101 (MQ=60)
                                                                                                                                        AAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAG                                                          >  LH00444:96:22JGLYLT3:3:2266:1194:25113/1‑101 (MQ=60)
                                                                                                                                        AAGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAG                                                          >  LH00444:96:22JGLYLT3:3:1241:37383:10758/1‑101 (MQ=60)
                                                                                                                                         AGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG                                                         >  LH00444:96:22JGLYLT3:3:1256:37337:9972/1‑101 (MQ=60)
                                                                                                                                         AGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG                                                         >  LH00444:96:22JGLYLT3:3:1256:37328:9956/1‑101 (MQ=60)
                                                                                                                                         AGGGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG                                                         >  LH00444:96:22JGLYLT3:3:1256:35460:22133/1‑101 (MQ=60)
                                                                                                                                         AGGGCCGCATAGC‑‑‑GGCCACGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG                                                         >  LH00444:96:22JGLYLT3:3:2147:38743:14523/1‑101 (MQ=60)
                                                                                                                                         AGGGCCGCATAGC‑‑‑GGCCACGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGG                                                         >  LH00444:96:22JGLYLT3:3:2147:38724:14555/1‑101 (MQ=60)
                                                                                                                                          GCGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGC                                                        <  LH00444:96:22JGLYLT3:3:1147:29857:23447/101‑1 (MQ=60)
                                                                                                                                           GGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCT                                                       >  LH00444:96:22JGLYLT3:3:1285:33343:11511/1‑101 (MQ=60)
                                                                                                                                           GGCCGCATAGC‑‑‑GGCCCCGGCAATTTCCACGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCAACACAAGGCCCACAAAGGACCGCGCAGGCT                                                       <  LH00444:96:22JGLYLT3:3:2161:2137:18961/101‑1 (MQ=60)
                                                                                                                                            GCCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTT                                                      >  LH00444:96:22JGLYLT3:3:2189:26288:7713/1‑101 (MQ=60)
                                                                                                                                             CCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTC                                                     >  LH00444:96:22JGLYLT3:3:1229:8952:27565/1‑101 (MQ=60)
                                                                                                                                             CCGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTC                                                     >  LH00444:96:22JGLYLT3:3:1229:8961:27549/1‑101 (MQ=60)
                                                                                                                                              CGCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGagatcggaagagcacacgtctgaactccagtcacattatcaaatctagggggggaggtggg  >  LH00444:90:22JGJLLT3:8:2266:23662:19762/1‑90 (MQ=60)
                                                                                                                                               GCATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAG                                                   >  LH00444:96:22JGLYLT3:3:1229:22932:10709/1‑101 (MQ=60)
                                                                                                                                                CATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGG                                                  >  LH00444:96:22JGLYLT3:3:2233:20029:19618/1‑101 (MQ=60)
                                                                                                                                                CATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGG                                                  >  LH00444:96:22JGLYLT3:3:1230:34286:1993/1‑101 (MQ=60)
                                                                                                                                                 ATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                                 >  LH00444:96:22JGLYLT3:3:2216:48913:29552/1‑101 (MQ=60)
                                                                                                                                                 ATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                                 >  LH00444:96:22JGLYLT3:3:1274:8804:13081/1‑101 (MQ=60)
                                                                                                                                                 ATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                                 >  LH00444:96:22JGLYLT3:3:1274:8794:13065/1‑101 (MQ=60)
                                                                                                                                                 ATAGC‑‑‑GGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAAGCCCACAAAGGACCGCGCAGGCTTCCGGC                                                 >  LH00444:96:22JGLYLT3:3:1208:21619:19874/1‑101 (MQ=60)
                                                                                                                                                     C‑‑‑C‑‑‑CCGGCAATTTCCACGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAAC                                          >  LH00444:96:22JGLYLT3:3:2140:48645:12808/1‑101 (MQ=60)
                                                                                                                                                         C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTTGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCAgatcggaagagcacacgtctgaactccagtca                                         >  LH00444:96:22JGLYLT3:3:1118:9710:14907/1‑69 (MQ=60)
                                                                                                                                                         C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT                                         >  LH00444:96:22JGLYLT3:3:2159:8979:2266/1‑101 (MQ=60)
                                                                                                                                                         C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT                                         >  LH00444:96:22JGLYLT3:3:2208:28720:25450/1‑101 (MQ=60)
                                                                                                                                                         C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT                                         >  LH00444:96:22JGLYLT3:3:1136:46287:20451/1‑101 (MQ=60)
                                                                                                                                                         C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT                                         >  LH00444:96:22JGLYLT3:3:2243:24282:12184/1‑101 (MQ=60)
                                                                                                                                                         C‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT                                         >  LH00444:96:22JGLYLT3:3:1198:19011:26411/1‑101 (MQ=60)
                                                                                                                                                         |                                                                                                                                              
GTACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGC‑‑‑G‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCA  >  AE015451_phaM1/5555458‑5555747

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑