Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F73 I2 R1 76 833.2 37290668 99.4% 37066923 136.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA AE015451_phaM1 5,555,608 +GCC intergenic (‑84/+87) PP_4887 CDS (conserved protein of unknown function) ← / ← PP_4888 CDS (putative methyl‑accepting chemotaxis transducer) –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AE015451_phaM15,555,6081.G93.4% 702.1 / 52.5 232intergenic (‑84/+87)PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)–/–
Reads supporting (aligned to +/- strand):  ref base . (0/15);  new base G (15/196);  total (16/216)
Fisher's exact test for biased strand distribution p-value = 6.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*AE015451_phaM15,555,6082.C93.5% 772.0 / 48.8 232intergenic (‑84/+87)PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)–/–
Reads supporting (aligned to +/- strand):  ref base . (0/15);  new base C (14/201);  total (16/216)
Fisher's exact test for biased strand distribution p-value = 6.07e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*AE015451_phaM15,555,6083.C90.1% 759.4 / 83.9 232intergenic (‑84/+87)PP_4887 CDS (conserved protein of unknown function)/PP_4888 CDS (putative methyl‑accepting chemotaxis transducer)–/–
Reads supporting (aligned to +/- strand):  ref base . (0/23);  new base C (16/193);  total (16/216)
Fisher's exact test for biased strand distribution p-value = 3.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 243 total aligned reads displayed.

TGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CG‑‑‑CC‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCT  >  AE015451_phaM1/5555472‑5555729
                                                                                                                                                  |||                                                                                                                          
tgCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑g‑‑‑cg                                                                                                                               <  1:17444247/137‑1 (MQ=255)
tgCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑g‑‑‑cg                                                                                                                               <  2:10144163/137‑1 (MQ=255)
      aaaTTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑g‑‑‑cggccccg                                                                                                                         <  2:14798998/137‑7 (MQ=255)
              gTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACTGCTCAGTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTc                                                                                                                <  2:18510120/137‑1 (MQ=37)
                  gCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCcgcg                                                                                                            <  2:5650493/137‑1 (MQ=38)
                   ccTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCgt                                                                                                           <  2:9810082/137‑1 (MQ=38)
                   ccTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCgt                                                                                                           <  1:6151847/137‑1 (MQ=38)
                   ccTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCgt                                                                                                           <  1:7175255/137‑1 (MQ=38)
                   ccTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCgt                                                                                                           <  2:14934065/137‑1 (MQ=38)
                   ccTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCgt                                                                                                           <  2:16046520/137‑1 (MQ=38)
                   ccTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCgt                                                                                                           <  2:2558486/137‑1 (MQ=38)
                   ccTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCgt                                                                                                           <  2:4463037/137‑1 (MQ=38)
                   ccTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCgt                                                                                                           <  2:7016591/137‑1 (MQ=38)
                   ccTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCgt                                                                                                           <  2:8341350/137‑1 (MQ=38)
                   ccTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCgt                                                                                                           <  2:8988308/137‑1 (MQ=38)
                        gCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATg                                                                                                      <  1:12619504/137‑1 (MQ=38)
                        gCAGCGATGAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATg                                                                                                      <  1:2095295/137‑1 (MQ=38)
                         cAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGc                                                                                                     <  2:2222295/137‑1 (MQ=38)
                         cAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGc                                                                                                     <  2:1220617/137‑1 (MQ=38)
                         cAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGc                                                                                                     <  2:9341651/137‑1 (MQ=38)
                         cAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGc                                                                                                     <  2:1220538/137‑1 (MQ=38)
                         cAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGc                                                                                                     <  1:1597670/137‑1 (MQ=38)
                         cAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGc                                                                                                     <  1:13277455/137‑1 (MQ=38)
                         cAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGc                                                                                                     <  1:17128335/137‑1 (MQ=38)
                         cAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGc                                                                                                     <  1:14959507/137‑1 (MQ=38)
                          aGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGca                                                                                                    <  2:4001396/137‑1 (MQ=38)
                                 aGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                                                             <  1:8274158/137‑1 (MQ=38)
                                 aGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                                                             <  1:12098913/137‑1 (MQ=38)
                                 aGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                                                             <  2:10992475/137‑1 (MQ=38)
                                 aGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                                                             <  1:5132624/137‑1 (MQ=38)
                                 aGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                                                             <  2:13240748/137‑1 (MQ=38)
                                 aGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                                                             <  1:2213074/137‑1 (MQ=38)
                                 aGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                                                             <  2:18205557/137‑1 (MQ=38)
                                 aGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                                                             <  1:13914113/137‑1 (MQ=38)
                                   tCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTg                                                                                           <  2:17802781/137‑1 (MQ=38)
                                   tCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTg                                                                                           <  1:15449774/137‑1 (MQ=38)
                                   tCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTg                                                                                           <  1:14108723/137‑1 (MQ=38)
                                   tCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTg                                                                                           <  1:17350428/137‑1 (MQ=38)
                                   tCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTg                                                                                           <  1:770092/137‑1 (MQ=38)
                                   tCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTg                                                                                           <  1:6807256/137‑1 (MQ=38)
                                    cGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgg                                                                                          <  1:14286930/137‑1 (MQ=38)
                                    cGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgg                                                                                          <  1:10242723/137‑1 (MQ=38)
                                     gggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTggg                                                                                         <  2:15133697/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTtggg                                                                                        <  2:7912130/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  2:14266961/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  1:11222225/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  2:8493595/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  1:2960239/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  1:13136081/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  1:4618868/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  2:14891476/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  1:15323056/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  1:8170131/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  1:5042615/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  1:8869143/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  1:925344/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  2:12050163/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  1:16579188/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  2:10665600/137‑1 (MQ=38)
                                      ggCGGACATGAGCAACTCCCTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTgggg                                                                                        <  2:1636941/137‑1 (MQ=38)
                                           aCATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGgctgct                                                                                   <  1:5963711/137‑1 (MQ=38)
                                           aCATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGgctgct                                                                                   <  1:13092374/137‑1 (MQ=38)
                                               gAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                                                               <  2:5403227/137‑1 (MQ=38)
                                               gAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGc                                                                               <  1:9744382/137‑1 (MQ=38)
                                                      tCCTTTTGTCCTGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGGGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt                                                                        <  2:10480872/137‑1 (MQ=37)
                                                             gTCATGTGTCGCCGACAGCATAACAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTAGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGac                                                                 <  2:13745681/137‑1 (MQ=38)
                                                                 tttttCGCCGACAGCATAGCAACCCCGCTCGGTTTTGGGAGCGGCCTTGTGTCGCGAAGGGGCCGCA‑‑‑TAGTGG‑‑‑CC‑‑‑CC‑GGCAGTTTCCGCGTGTATGCAACAAACCTGGGGTTGCTGGGCAGCCCTTTCGCGACACaa                                                             <  2:7744202/133‑1 (MQ=25)
                                                                 tttgtCGCCGACAGCAGAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGGGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATAAAAAAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACaa                                                             <  1:18133880/135‑1 (MQ=37)
                                                                 tgtgTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCA‑‑‑TG‑‑‑G‑‑‑CGTCCCC‑GGCAATTTCTGCGTGGATGAAAAAAACTTGGGGTTGCGATGCAGCCCTTTCGCGACACaa                                                             <  1:4356144/137‑1 (MQ=25)
                                                                 tgtgTCGCCGAAAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCACA‑‑‑TA‑‑‑G‑‑‑CGACCCC‑GACAATTCCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACaa                                                             <  2:7525298/137‑1 (MQ=38)
                                                                 tgtgTCGCCAACAGCATAGCAACACCTCCCAGTTGTGGGAGCGGCCTTGTGTCGCGAAGGGGCCGCG‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAACCCTGGGTCTGCTGTGCAGCCCTTTCGCGACACaa                                                             <  2:15358820/137‑1 (MQ=25)
                                                                 tgtgTCGCCAACAGCATAGCAACACCCCTCAGGTGTGGGAGCGGCCTTGTTTCACGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCACTTCCCGCGGGTATACAACAAACCTGGGGCTACTATGCAGCCCTTTCGAGACACaa                                                             <  2:1781412/137‑1 (MQ=255)
                                                                 tgtgCCGCCGACAACACAGCAACACCGCTCAGGTGGGGGAGCGGCTTTGTTTCGAGAAGGGGCCGCATGGTG‑‑‑G‑‑‑CC‑‑‑CC‑GGCAATTTCCGCGTGCAGGAAACAAACTTGGGGTTACTATGCAGCCTTTTCGCGAAACaa                                                             <  2:444414/137‑1 (MQ=255)
                                                                     tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAACTTCCGCATGTACGCAAAAAACCCGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGcc                                                         >  1:1761064/1‑137 (MQ=25)
                                                                      cGCCGAAAGCAGAAAAACACTGCTGGGGGGGGGGGGTGGCTTTGTGTAGAGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGAAGTTTCTGTGGGGGGGAAACAAACCGGGGGTTGCGATGCATCCCTTTCGCGACACAAGGccc                                                        <  2:15883582/137‑1 (MQ=255)
                                                                           aCAGCATAGCAACACCTCGAAGGTTTGGGAGCGGCCTTGTTTCGCGAAAGGGCCACA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATGTCCGCGTGTATGCAACAAACCTGTGGCTGCTATGCAGCCCTTTCGAGACACAAGGCCCACaaa                                                   <  2:17682082/137‑1 (MQ=255)
                                                                                acaGCAACACCGCTCAGGTGTGGGATCGGCCTTGTGTCGCAAAAGGGCCGAA‑‑‑GA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGGATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAcc                                              <  1:15650711/135‑1 (MQ=25)
                                                                                  aacAACACCGCTAAGGGGGGGGAGCGGCCGTGGGTCGAGAAGGGGCCGAA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGAAATTCCTGCGTGTATAAAAAAACCCTGGGCCTGCTATGCACCCCTTCCGAAACACAAGGCCCACAAAGGACcgc                                            <  1:12599707/135‑1 (MQ=255)
                                                                                  aGCAACACCGCTCAGGTGTGGGAGAGGCCTTGTGTCGCAAAAGGGACACA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCACACGTATGCAACAAAACTGGGGCTGCTATGCAACACTTTCGCGACACAAGGCACACAAAGGACcga                                            >  2:18378216/1‑136 (MQ=255)
                                                                                       ccccGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAGTTTCCGCGTGTGTGCAACAACCTTGGGGTTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAgg                                       <  2:3240678/135‑1 (MQ=25)
                                                                                        acCGCTCAGGTGGGGGAGTGGCCTTGTTTCGAAAAGGGGCCGCA‑‑‑GA‑‑‑G‑‑‑GGGC‑CCAGGCAGTTTCCGTGTGTAGGAAACAAACCTGGGGCTGCTATGAAGCCTTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGc                                      <  2:1052195/137‑1 (MQ=255)
                                                                                             tCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAAAAAACCTGGGGCGGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAg                                 <  2:15495377/137‑1 (MQ=37)
                                                                                             tCAGGTGTGGGAGCGACCTTGTGTCACAAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGAAATTTCCGCGTGTATGCAACAACCCTGGGGCTGCGAGGCATCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAg                                 <  2:14682564/137‑1 (MQ=255)
                                                                                               aGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAAAAAACCTGGGGCTGCTATGCAGCCCCTTCGAGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGc                               >  1:17917086/1‑137 (MQ=37)
                                                                                                  tgtgGGGGCGGCTTTGTGTCGCGAAAGGGCCGCA‑‑‑GA‑‑‑G‑‑‑CGGC‑CCTGGCAATTTCCGCGTGTATGCAACAAACCTGGGACTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCg                            <  2:12696649/137‑1 (MQ=37)
                                                                                                  tgtgGGAGTGGCCTTGTGTCGCAAAAGGGCCACA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTCCCGCGTGTATGAAACAAACCGGGGGCTGCTAGGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCg                            <  2:10075374/137‑1 (MQ=37)
                                                                                                   ttgGGAGCGGCCTTGTTTCGCGAAAGGGCCGCA‑‑‑GA‑‑‑G‑‑‑CGGC‑CCTGGCAATTTCCGCGGGGATGCAACAAACCTGGGGCTGCTAGACAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCgg                           <  2:1964872/136‑1 (MQ=25)
                                                                                                   gtgGGAGCGGCCTTGTTTCGCGAAAGGTCCGCG‑‑‑TG‑‑‑GTGTCC‑‑‑CC‑GGCACTTTCCGTGTGGCTGCAACAACCCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCgg                           <  1:17696115/137‑1 (MQ=255)
                                                                                                         gCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAAcc                                                                                             <  2:28261/65‑1 (MQ=17)
                                                                                                          cGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTTTATGCAACAACCCTGGTGCTGCTATGCATCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGc                    <  2:6725725/137‑1 (MQ=37)
                                                                                                                  tttCGAGAAGGGGCCGCA‑‑‑GA‑‑‑G‑‑‑CGCCCCC‑GGCACTTTCCGTGTGTGTAAAACAACCCTGGGTTTGCTGTACATCCTTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTg            <  1:1090449/135‑1 (MQ=255)
                                                                                                                  tgtCGAGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAGTTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTg            <  2:8561502/137‑1 (MQ=255)
                                                                                                                   ttCGCGAAAGGGCCGCA‑‑‑TG‑‑‑G‑‑‑CGGC‑CCTGGCAGTTTCCGTGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCTTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTgg           <  2:805771/136‑1 (MQ=255)
                                                                                                                         aaaGGTCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCACTTTCCGTGTGTATGCAACAAACTTGGGGCTGTTATGCATCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCa     <  1:10569640/137‑1 (MQ=255)
                                                                                                                          aaGGGCCGCA‑‑‑TC‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGATTCAGGCCCGGAACTGGCCCAGGGTGGCGTGCAg    >  2:18094729/1‑137 (MQ=255)
                                                                                                                          aaGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGTCCC‑GGCAATTTCCTCATGTATGCAACAAACCTGGGGCTGCTCTGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAACGCACAGGCTTCCGGACCGGAACTGGCCCAGGCTGGCGCGCAg    >  2:4642990/1‑137 (MQ=255)
                                                                                                                          aaGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGATATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAAATGGCCCAGGCTGGAGCGCAg    >  2:3112967/1‑137 (MQ=255)
                                                                                                                          aaGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAATTTCCGCGTGTATGCAAAAAACCTGGGGCTGCTCTGCAGCCCTTTCGCGACACAAGGCCCAAAAAGGACCGCGCAGGATTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAg    >  2:8789610/1‑137 (MQ=255)
                                                                                                                          aaGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑GGCAAGTTCCGCATGTATGCAACAAAACTGGGGCTGCTATGCAGCCCTTTTGCGACACAAGGCCCACAAAAGACAGCGTAGGCTTCAGGCCCAGAAATGGACCAAGCTGGCGCGTAg    >  2:3679956/1‑137 (MQ=255)
                                                                                                                          aaGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CGGCCCC‑CGCAATTTCCGCGTGTATGCAACAAAACTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCCGGCTTCCGGCCCGGAACTGGCCCCGGCTTGCGCGCAg    >  2:12957103/1‑137 (MQ=37)
                                                                                                                                                  |||                                                                                                                          
TGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCA‑‑‑TA‑‑‑G‑‑‑CG‑‑‑CC‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCT  >  AE015451_phaM1/5555472‑5555729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CG‑‑‑CC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCAC  >  AE015451_phaM1/5555460‑5555751
                                                                                                                                                           |                                                                                                                                                     
ACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CG‑‑‑GC                                                                                                                                                  <  LH00941:114:22FVMWLT1:2:1143:30732:13586/151‑1 (MQ=60)
 CGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGgcc                                                                                                                                                    >  LH00941:114:22FVMWLT1:2:2126:16920:2441/1‑148 (MQ=60)
  GCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGgccc                                                                                                                                                   <  LH00941:114:22FVMWLT1:2:1231:29170:18566/151‑5 (MQ=60)
  GCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGgccc                                                                                                                                                   <  LH00941:114:22FVMWLT1:2:1123:6972:8270/151‑5 (MQ=60)
  GCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGgccc                                                                                                                                                   <  LH00941:114:22FVMWLT1:2:1238:7102:5516/151‑5 (MQ=60)
  GCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGgccc                                                                                                                                                   <  LH00941:114:22FVMWLT1:2:1231:29179:18582/151‑5 (MQ=60)
  GCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGgccc                                                                                                                                                   <  LH00941:114:22FVMWLT1:2:1231:29188:18566/151‑5 (MQ=60)
            TGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTC                                                                                                                                      <  LH00941:114:22FVMWLT1:2:1216:42408:7869/151‑1 (MQ=60)
            TGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTC                                                                                                                                      <  LH00941:114:22FVMWLT1:2:2227:36140:26508/151‑1 (MQ=60)
            TGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTC                                                                                                                                      <  LH00941:114:22FVMWLT1:2:2253:13804:7549/151‑1 (MQ=60)
            TGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTC                                                                                                                                      <  LH00941:114:22FVMWLT1:2:2253:13814:7533/151‑1 (MQ=60)
            TGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTC                                                                                                                                      <  LH00941:114:22FVMWLT1:2:1123:4800:28430/151‑1 (MQ=60)
             GCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GACAATTTCC                                                                                                                                     <  LH00941:114:22FVMWLT1:2:2105:5206:22761/151‑1 (MQ=60)
                       CAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGC                                                                                                                           <  LH00941:114:22FVMWLT1:2:2216:2424:17749/151‑1 (MQ=60)
                       CAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGC                                                                                                                           <  LH00941:114:22FVMWLT1:2:2244:35696:9759/151‑1 (MQ=60)
                          GTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAAC                                                                                                                        <  LH00941:114:22FVMWLT1:2:2258:12575:26460/151‑1 (MQ=60)
                          GTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAAC                                                                                                                        <  LH00941:114:22FVMWLT1:2:2258:12565:26476/151‑1 (MQ=60)
                            CGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAA                                                                                                                      <  LH00941:114:22FVMWLT1:2:1150:16707:28718/151‑1 (MQ=60)
                               CCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGNTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACC                                                                                                                   <  LH00941:114:22FVMWLT1:2:2249:11696:23466/151‑1 (MQ=60)
                               CCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACC                                                                                                                   <  LH00941:114:22FVMWLT1:2:2120:14646:5548/151‑1 (MQ=60)
                               CCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACC                                                                                                                   <  LH00941:114:22FVMWLT1:2:2135:7407:19367/151‑1 (MQ=60)
                               CCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACC                                                                                                                   <  LH00941:114:22FVMWLT1:2:1141:51200:23610/151‑1 (MQ=60)
                               CCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACC                                                                                                                   <  LH00941:114:22FVMWLT1:2:1238:12556:19895/151‑1 (MQ=60)
                               CCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACC                                                                                                                   <  LH00941:114:22FVMWLT1:2:1238:12565:19911/151‑1 (MQ=60)
                               CCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACC                                                                                                                   <  LH00941:114:22FVMWLT1:2:1201:29817:10752/151‑1 (MQ=60)
                               CCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACC                                                                                                                   <  LH00941:114:22FVMWLT1:2:1223:48797:13554/151‑1 (MQ=60)
                               CCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACC                                                                                                                   <  LH00941:114:22FVMWLT1:2:1223:48815:13554/151‑1 (MQ=60)
                                    GCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                              <  LH00941:114:22FVMWLT1:2:2150:41955:22009/151‑1 (MQ=60)
                                    GCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                              <  LH00941:114:22FVMWLT1:2:2246:46079:11921/151‑1 (MQ=60)
                                    GCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                              <  LH00941:114:22FVMWLT1:2:2150:41946:22025/151‑1 (MQ=60)
                                    GCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                              <  LH00941:114:22FVMWLT1:2:1132:16911:21705/151‑1 (MQ=60)
                                    GCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                              <  LH00941:114:22FVMWLT1:2:2150:41955:22041/151‑1 (MQ=60)
                                    GCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                              <  LH00941:114:22FVMWLT1:2:2152:46384:2745/151‑1 (MQ=60)
                                    GCAGCGATGAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGG                                                                                                              <  LH00941:114:22FVMWLT1:2:1132:16920:21721/151‑1 (MQ=60)
                                     CAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                             <  LH00941:114:22FVMWLT1:2:1259:51524:27629/151‑1 (MQ=60)
                                     CAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                             <  LH00941:114:22FVMWLT1:2:1259:51515:27645/151‑1 (MQ=60)
                                     CAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                             <  LH00941:114:22FVMWLT1:2:2248:5003:15556/151‑1 (MQ=60)
                                     CAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                             <  LH00941:114:22FVMWLT1:2:1248:29928:7581/151‑1 (MQ=60)
                                     CAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                             <  LH00941:114:22FVMWLT1:2:2216:30482:1624/151‑1 (MQ=60)
                                     CAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                             <  LH00941:114:22FVMWLT1:2:1121:48492:6845/151‑1 (MQ=60)
                                     CAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                             <  LH00941:114:22FVMWLT1:2:1125:32831:8574/151‑1 (MQ=60)
                                     CAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                             <  LH00941:114:22FVMWLT1:2:2160:7934:20055/151‑1 (MQ=60)
                                     CAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGC                                                                                                             <  LH00941:114:22FVMWLT1:2:2160:7925:20071/151‑1 (MQ=60)
                                          ATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTA                                                                                                        <  LH00941:114:22FVMWLT1:2:2115:52116:17990/151‑1 (MQ=60)
                                             AGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                     <  LH00941:114:22FVMWLT1:2:1208:2331:5067/151‑1 (MQ=60)
                                             AGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                     <  LH00941:114:22FVMWLT1:2:1254:42436:27645/151‑1 (MQ=60)
                                             AGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                     <  LH00941:114:22FVMWLT1:2:2104:40726:13826/151‑1 (MQ=60)
                                             AGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                     <  LH00941:114:22FVMWLT1:2:2170:21986:6188/151‑1 (MQ=60)
                                             AGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                     <  LH00941:114:22FVMWLT1:2:1134:44831:14851/151‑1 (MQ=60)
                                             AGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                     <  LH00941:114:22FVMWLT1:2:2142:40208:26252/151‑1 (MQ=60)
                                             AGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                     <  LH00941:114:22FVMWLT1:2:2142:40199:26236/151‑1 (MQ=60)
                                             AGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                     <  LH00941:114:22FVMWLT1:2:1208:2322:5051/151‑1 (MQ=60)
                                             AGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGC                                                                                                     <  LH00941:114:22FVMWLT1:2:1209:23576:20792/151‑1 (MQ=60)
                                               TCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                   <  LH00941:114:22FVMWLT1:2:2223:1305:12385/151‑1 (MQ=60)
                                               TCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                   <  LH00941:114:22FVMWLT1:2:2223:1314:12401/151‑1 (MQ=60)
                                               TCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                   <  LH00941:114:22FVMWLT1:2:2221:37472:8638/151‑1 (MQ=60)
                                               TCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                   <  LH00941:114:22FVMWLT1:2:2203:19915:4939/151‑1 (MQ=60)
                                               TCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                   <  LH00941:114:22FVMWLT1:2:2203:19925:4923/151‑1 (MQ=60)
                                               TCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                   <  LH00941:114:22FVMWLT1:2:2203:37943:25404/151‑1 (MQ=60)
                                               TCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                   <  LH00941:114:22FVMWLT1:2:2251:32655:24923/151‑1 (MQ=60)
                                               TCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                   <  LH00941:114:22FVMWLT1:2:1112:23733:22697/151‑1 (MQ=60)
                                               TCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                   <  LH00941:114:22FVMWLT1:2:1123:16606:4779/151‑1 (MQ=60)
                                               TCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                   <  LH00941:114:22FVMWLT1:2:2251:32673:24923/151‑1 (MQ=60)
                                               TCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAG                                                                                                   <  LH00941:114:22FVMWLT1:2:1233:47770:6845/151‑1 (MQ=60)
                                                CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                                  <  LH00941:114:22FVMWLT1:2:2205:14507:25708/151‑1 (MQ=60)
                                                CGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGC                                                                                                  <  LH00941:114:22FVMWLT1:2:2114:40134:17637/151‑1 (MQ=60)
                                                 GGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCC                                                                                                 <  LH00941:114:22FVMWLT1:2:1126:15690:24267/151‑1 (MQ=60)
                                                 GGGCGGACATGAGCAACTCCTTTTGTCATGTGTCACCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGTCTT‑GGGTCGCGAAAGGGCTGCGGA‑‑‑G‑‑‑CGGCCCT‑‑‑GGCGATTTCTGCGGGTATGCAACAAACCTGGTGCTGCTATGCAGCC                                                                                                 <  LH00941:114:22FVMWLT1:2:1154:1573:16596/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:1170:35280:6861/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:2204:25416:7229/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:1254:5826:5964/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:1149:11586:17157/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:1145:29983:19143/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:1134:30344:5484/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:2221:42085:15251/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:2158:32248:16308/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:2221:42066:15251/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:1115:33515:4315/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:1206:3903:23674/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:2233:48741:25820/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:2129:40735:16596/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:2129:40717:16596/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:1210:16300:19143/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:2240:42676:11088/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:1228:37989:19687/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:1170:38729:12321/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:1263:45404:22057/151‑1 (MQ=60)
                                                  GGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCC                                                                                                <  LH00941:114:22FVMWLT1:2:1253:44257:12161/151‑1 (MQ=60)
                                                     GGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTT                                                                                             <  LH00941:114:22FVMWLT1:2:1251:23022:19703/151‑1 (MQ=60)
                                                       ACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                           <  LH00941:114:22FVMWLT1:2:1220:39524:19110/151‑1 (MQ=60)
                                                       ACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                           <  LH00941:114:22FVMWLT1:2:2157:44137:26172/151‑1 (MQ=60)
                                                       ACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCG                                                                                           <  LH00941:114:22FVMWLT1:2:1114:25573:27005/151‑1 (MQ=60)
                                                           GAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGAC                                                                                       <  LH00941:114:22FVMWLT1:2:2106:15431:27789/151‑1 (MQ=60)
                                                                ACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAG                                                                                  <  LH00941:114:22FVMWLT1:2:2246:22846:19463/151‑1 (MQ=60)
                                                                   CCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAAAAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCC                                                                               >  LH00941:114:22FVMWLT1:2:1127:12584:21673/1‑151 (MQ=60)
                                                                   CCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAACTTCCGCATGTACGCAAAAAACCCGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCC                                                                               >  LH00941:114:22FVMWLT1:2:1127:12593:21657/1‑151 (MQ=60)
                                                                           CATGTGTCGCCGACAGCATAGCAACCCCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCACATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCGGCTGTGCAGCCCTTTTGCGACACAAGGCCCACAAAGG                                                                       <  LH00941:114:22FVMWLT1:2:2168:36094:9711/151‑1 (MQ=60)
                                                                             TTTGTCGCCGACAGCAGAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GGGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATAAAAAAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAC                                                                     <  LH00941:114:22FVMWLT1:2:2263:32146:13890/151‑1 (MQ=60)
                                                                             TGTGTCGCCGACAGCATAGCAACACCGCTCGGGGGTGGGAGCGGCCTT‑GTGTCGCGAAGGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GACACTTTCCGCGGGTATGAAACAAACCTGGGGCTGCTATGCAGCCTTTTCGCGACACAAGGCCCACAAAGGAC                                                                     <  LH00941:114:22FVMWLT1:2:1166:46513:14147/151‑1 (MQ=60)
                                                                             TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCTTT‑GTGTCGCGAAAGGGCCGCATG‑‑‑G‑‑‑CGTCCCC‑‑‑GGCAATTTCTGCGTGGATGAAAAAAACTTGGGGTTGCGATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAC                                                                     <  LH00941:114:22FVMWLT1:2:1166:46522:14131/151‑1 (MQ=60)
                                                                             TGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAGGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGAAATTTCCGTGTGTATGCAACAAACTTGGGGTTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAC                                                                     <  LH00941:114:22FVMWLT1:2:2263:32156:13906/151‑1 (MQ=60)
                                                                             TGTGTCGCAGACAGCATAGCAACACCGCTCAGGGGTGGGAGTGGCCTT‑GTGTCGAGAAAGGGCAGCATAGTGG‑‑‑CC‑‑‑CC‑‑‑GGCAGTTTCCGTGGGGATGAAAAAAACTTGGGGTTGTTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGAC                                                                     <  LH00941:114:22FVMWLT1:2:2114:45505:20600/151‑1 (MQ=53)
                                                                                            ACAGCAACACCGCTCAGGTGTGGGATCGGCCTT‑GTGTCGCAAAAGGGCCGAAGA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGGATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGG                                                      <  LH00941:114:22FVMWLT1:2:2226:11327:13026/151‑1 (MQ=60)
                                                                                             TAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAAAAAACCTGGGGCTGCTATGCAGCCCCTTCGAGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGC                                                     >  LH00941:114:22FVMWLT1:2:2260:49083:7902/1‑151 (MQ=60)
                                                                                                    accgcgcggggggGGGAGCGGCCTT‑GTTTCACGAAAGGTCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATCTCCGTGTGTATGAAACAAACCTGGGGCTGCTGTGCAGCCTTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAAC                                              <  LH00941:114:22FVMWLT1:2:2130:22827:7261/138‑1 (MQ=60)
                                                                                                    CCCGCTCGGGTGGGGGAGCGGCCTT‑GTGTCGAGAAGGTGCCGAAGA‑‑‑G‑‑‑CGTCCCT‑‑‑GGCATTTTCCGGGTGTATGCAACAACCTTGGGGCTGCTATGCAGCCTTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAAC                                              <  LH00941:114:22FVMWLT1:2:1264:46476:18054/151‑1 (MQ=60)
                                                                                                       GCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCctgtctcttatacacatctccgagcccacgagacgctcgcacatatctggtgtggctt                                           >  LH00941:114:22FVMWLT1:2:1101:46837:13618/1‑93 (MQ=60)
                                                                                                         cagggtgtgggggcgtctTT‑GTGTCGCGAAGGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGTGTGTAGGCAACAAACCGGGGGTTGCTGTGCATCCTTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCC                                         <  LH00941:114:22FVMWLT1:2:1269:1333:26300/133‑1 (MQ=60)
                                                                                                              TGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCTCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGC                                    <  LH00941:114:22FVMWLT1:2:1111:21404:21160/151‑1 (MQ=60)
                                                                                                               GTGGGAGCGGCTTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTGTGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCT                                   <  LH00941:114:22FVMWLT1:2:1132:25129:14547/151‑1 (MQ=60)
                                                                                                               GTGGGAGCGGCCTT‑GTTTCGCGAAAGGTCCGCGTG‑‑‑GTGTCC‑‑‑CC‑‑‑GGCACTTTCCGTGTGGCTGCAACAACCCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCT                                   <  LH00941:114:22FVMWLT1:2:2256:22088:28782/151‑1 (MQ=60)
                                                                                                               GGGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCAGA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGGGGAGAAAACAAACCTGGGGCTGCTAGGAACCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCT                                   <  LH00941:114:22FVMWLT1:2:2158:14692:9183/151‑1 (MQ=60)
                                                                                                                          CTTGGTGTCGAGAAGGGGCCGCATA‑‑‑G‑‑‑CG‑‑‑GCCTAGGCAATTTCCGTGTGGGTGAAACAAACCTGGGGCGGCGGTGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGC                         <  LH00941:114:22FVMWLT1:2:2253:50470:21288/151‑1 (MQ=60)
                                                                                                                          CTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCCGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCT                        >  LH00941:114:22FVMWLT1:2:2148:24307:2073/1‑151 (MQ=60)
                                                                                                                                GTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCC                   >  LH00941:114:22FVMWLT1:2:2140:5983:19943/1‑151 (MQ=60)
                                                                                                                                  CGCGAAAGGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGC                 >  LH00941:114:22FVMWLT1:2:2205:19610:14147/1‑151 (MQ=60)
                                                                                                                                      AAAGGTCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCACTTTCCGTGTGTATGCAACAAACTTGGGGCTGTTATGCATCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGA             <  LH00941:114:22FVMWLT1:2:2119:11160:18214/151‑1 (MQ=60)
                                                                                                                                         GGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCC          >  LH00941:114:22FVMWLT1:2:1103:31869:15460/1‑151 (MQ=60)
                                                                                                                                         GGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCA          >  LH00941:114:22FVMWLT1:2:2202:49046:18182/1‑151 (MQ=60)
                                                                                                                                         GGGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCA          >  LH00941:114:22FVMWLT1:2:1249:38590:14291/1‑151 (MQ=60)
                                                                                                                                          GGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCANAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCAT         >  LH00941:114:22FVMWLT1:2:2232:4430:17125/1‑151 (MQ=60)
                                                                                                                                          GGCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCAT         >  LH00941:114:22FVMWLT1:2:1262:49592:27165/1‑151 (MQ=60)
                                                                                                                                           GCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATC        >  LH00941:114:22FVMWLT1:2:2229:39256:12561/1‑151 (MQ=60)
                                                                                                                                           GCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATC        >  LH00941:114:22FVMWLT1:2:2252:5354:8990/1‑151 (MQ=60)
                                                                                                                                           GCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATC        >  LH00941:114:22FVMWLT1:2:2252:5364:8974/1‑151 (MQ=60)
                                                                                                                                           GCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATC        >  LH00941:114:22FVMWLT1:2:2252:5373:8958/1‑151 (MQ=60)
                                                                                                                                           GCCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATC        >  LH00941:114:22FVMWLT1:2:2252:5382:8974/1‑151 (MQ=60)
                                                                                                                                            CCGCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGTGTGTATGCAACAAACTTGGGGCTGCTGTGCATCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCC       <  LH00941:114:22FVMWLT1:2:2218:4800:26829/151‑1 (MQ=60)
                                                                                                                                            CCGCAGA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACTTGGGGCTGCTATGCATCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCC       <  LH00941:114:22FVMWLT1:2:1166:49120:4827/151‑1 (MQ=60)
                                                                                                                                              GCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAG     >  LH00941:114:22FVMWLT1:2:1144:13915:4507/1‑151 (MQ=60)
                                                                                                                                              GCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAG     >  LH00941:114:22FVMWLT1:2:2235:39071:3466/1‑151 (MQ=60)
                                                                                                                                              GCATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAG     >  LH00941:114:22FVMWLT1:2:2235:39080:3482/1‑151 (MQ=60)
                                                                                                                                               CATA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGC    >  LH00941:114:22FVMWLT1:2:1248:20193:14002/1‑151 (MQ=60)
                                                                                                                                                 TA‑‑‑G‑‑‑CGTCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACTTGGGGCTGCGAGGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCAC  <  LH00941:114:22FVMWLT1:2:1169:49980:4587/151‑1 (MQ=60)
                                                                                                                                                 TA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCAC  >  LH00941:114:22FVMWLT1:2:1165:46744:10640/1‑151 (MQ=60)
                                                                                                                                                 TA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCAC  >  LH00941:114:22FVMWLT1:2:2152:28670:3322/1‑151 (MQ=60)
                                                                                                                                                 TA‑‑‑G‑‑‑CGGCCCC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCAC  >  LH00941:114:22FVMWLT1:2:2164:5900:25948/1‑151 (MQ=60)
                                                                                                                                                           |                                                                                                                                                     
ACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTT‑GTGTCGCGAAAGGGCCGCATA‑‑‑G‑‑‑CG‑‑‑CC‑‑‑GGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCAC  >  AE015451_phaM1/5555460‑5555751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑