Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F18 I0 R1 274 115.5 2655328 86.7% 2302169 226.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,319,405 A→C 11.5% V68G (GTG→GGG)  phnJ ← carbon‑phosphorus lyase, SAM‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,319,4050AC11.5% 224.2 / 2.2 94V68G (GTG→GGG) phnJcarbon‑phosphorus lyase, SAM‑dependent
Reads supporting (aligned to +/- strand):  ref base A (47/31);  new base C (3/12);  total (50/44)
Fisher's exact test for biased strand distribution p-value = 5.02e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCGCGTGCATGGTGCGGGTTTCCGTTTCGCGCGGCTCGATAAAGCGCAGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCAGACGTTTGAGT  >  NC_000913/4319169‑4319636
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                          
gcgcGTGCATGGTGCGGGTTTCCGTTTCGCGCGGCTCGATAAAGCGCAGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCCCATCGTCCGTACGTTCCGTGGGGTTTACCCCGGCCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGGGTCTTCCGCG‑CCCCGGGCAACCAcg                                                                                                                                                                                                                                          >  2:240038/1‑238 (MQ=255)
   cgTGCATGGTGCGGGTTTCCGTTTCGCGCGGCTCGATAAAGCGCAGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCtt                                                                                                                                                                                                                                        <  2:1007101/238‑1 (MQ=255)
   cgTGCATGGTGCGGGTTTCCGTTTCGCGCGGCTCGATAAAGCGCAGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGGGACGCGTCTGGATAACCGTCGCATCGTCCGTACGGTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGACGTTGCGAA‑ACGCACCGCCGTTGGTGGTGGCA‑CCGCGCCCCCGGCCAATCCCCTTc                                                                                                                                                                                                                                       >  1:1117387/1‑239 (MQ=255)
     tGCATGGTGCGGGTTTCCGTTTCGCGCGGCTCGATAAAGCGCAGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGTG‑CCCTGGTCAATCACCTTCa                                                                                                                                                                                                                                      >  2:780587/1‑238 (MQ=255)
     tGCATGGTGCGGGTTTCCGTTTCGCGCGGCTCGATAAAGCGCAGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGGCATCCGCG‑CCCTGGTCAATAACCTTcg                                                                                                                                                                                                                                      >  2:263968/1‑237 (MQ=255)
     tGCATGGTGCGGGTTTCCGTTTCGCGCGGCTCGATAAAGCGCAGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGAATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTTAAGAACTTTCGAA‑TCGACCAGGCGTTGGTGGGGTCATCCGCG‑CCCTGGCAAATCCCCTTcc                                                                                                                                                                                                                                      >  1:626762/1‑237 (MQ=255)
                  gtttcttttgccgtgggtcggaaaaCCGCAGCGGGCCGGGGTTTTGCACCTGGAAGATAATTATCTGATCCCAGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTGCCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTc                                                                                                                                                                                                                        <  1:1105091/216‑1 (MQ=255)
                       gTTGCGCGCGGGTCGATAAAGCGCAGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAAt                                                                                                                                                                                                                  <  2:690656/239‑1 (MQ=255)
                         tttcggcgGTTCGTTAAATCGCAGCGGCCCGGGGTTTGGCACCTGGGAGATAATTTTCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTCCCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCa                                                                                                                                                                                                                <  1:555193/234‑1 (MQ=255)
                            ggggggCTCGATAAAGCGCAGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGGGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGc                                                                                                                                                                                                             <  2:352273/235‑1 (MQ=255)
                                       tAAAGCGCAGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGGCACGCGCTTGAAAAAGTTGCGAA‑TCGACACGGCTGTGGGGGGGTTACCCGCC‑CCCTGGTGAAGCACCCTCAACC‑CGTCGCGTTCGCCaacaaccgcggggggtaa                                                                                                                                                                                                   >  1:1211278/1‑222 (MQ=255)
                                            cgcAGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGCC‑GGTAACCTGCAt                                                                                                                                                                                            >  2:1067267/1‑239 (MQ=255)
                                               aGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGGTGGTGGTGTCATCCGCG‑CCCTGGGCAATCAACTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTGAGCTGAATg‑c                                                                                                                                                                                         >  2:1302454/1‑238 (MQ=255)
                                                   gCTGGGGGTTTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGGCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATg‑ccgcc                                                                                                                                                                                     <  2:1117387/238‑1 (MQ=255)
                                                              ggCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGCCATCCGCG‑CCCTGGTCAATCACCTTAAGCA‑CGCCGCTTTCCCCAACCACGCGGGC‑GGGAAGCCGAAAT‑CCCCCCGCTCCCCacc                                                                                                                                                                          >  1:49113/1‑236 (MQ=255)
                                                              ggCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGGCCGTACGTTCCGTGGTGTTTCTCCCGGTCACGCGCTTGAAGCCGTTGCGAA‑TCGACCCGGCGTTGGTGGTGTCATCCGCC‑CCCTGGGCATTCCCCTTCCGCA‑CGTCGCTTTTCCCCACCCCGCACGG‑GGTAACCGGCAGG‑CCGCCGGTGcccccccg                                                                                                                                                                         >  1:1212690/1‑235 (MQ=255)
                                                                  ccTGGGAGATTTTTAGCTGGCCTTCGGGCCGCGGTGTTGCGGGGGTGCGGTGACCCGTCTTGGTAACCGTTGCATGGTCCGTGCGTTCCGTGGTGTTTTCCCCTGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTa                                                                                                                                                                      <  1:263968/238‑1 (MQ=255)
                                                                   cTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGCAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGGAACCTGAATG‑CCCCCGGTTCCCCAGcctgcc                                                                                                                                                                     >  2:515543/1‑234 (MQ=255)
                                                                     ggAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAACGTGAATT‑CCCCCCGTTCCCCACCCggaacg                                                                                                                                                                   >  2:1237394/1‑233 (MQ=255)
                                                                                    gATCTTCGGTCAGCGGCGTTTCGGGGATCCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGTGGGTTACCCCGGTCCCGCGCTTTAAGAAGTTGCGAA‑TCGACACGGAGTTGGTGGTGTCATTCGCG‑CGCTGGTCAATCACCTCCAGCC‑AGTCGCTTTAGCCAATCACGCGGGC‑GGAAACGTGAATA‑CCGCAGGTTCCCACGCCGGAaggcgtaggccgttcgccc                                                                                                                                                   >  1:1073545/1‑230 (MQ=255)
                                                                                     aTCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGGTCCCCAACCGTACGGCATCGGCATCTCgcgc                                                                                                                                                   >  2:205380/1‑238 (MQ=255)
                                                                                     aTCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGCC‑GGGAAGCTGAATT‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCgcgc                                                                                                                                                   >  2:602089/1‑238 (MQ=255)
                                                                                         tCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCACCCGTAcggcatccgcattcccccccccc                                                                                                                                               >  2:700568/1‑227 (MQ=255)
                                                                                             ccAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCaaa                                                                                                                                           <  2:626762/237‑1 (MQ=255)
                                                                                               aGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTCCGGCATCGGCATCCCCCGCCCGCCAAACg                                                                                                                                         >  2:484960/1‑238 (MQ=255)
                                                                                               aGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCCCCCAACg                                                                                                                                         >  2:1319427/1‑238 (MQ=255)
                                                                                                 cggcgTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCTTACGGCATCGGCATCTCGCGCCCGCCAAACGGc                                                                                                                                       >  2:955305/1‑238 (MQ=255)
                                                                                                 cggcgTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGGTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGGTGCGAA‑TCGACCCGGCGTTGGTGTTGTCCTCCGCG‑CGCTGGTCAATCACCTTCATCC‑CGTCGCTTTCGCCACTCACGCTCGC‑GGTCACCGTAGTGCCCGCCGTTTCCCCACCCG‑CCGGCAGCGGGACTCCGCCCCCACCCAACGGc                                                                                                                                       >  1:129059/1‑238 (MQ=255)
                                                                                                  ggcgTTTCGGGGATTCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACgg                                                                                                                                        <  2:49113/236‑1 (MQ=255)
                                                                                                  ggcgTTTCGGGGATGCGGTGCCGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACgg                                                                                                                                        <  2:1097958/236‑1 (MQ=255)
                                                                                                          gggggtcgggTGAAGGGTCAGGATAACCGGTGCATCGTCCGTACGTTCCGGGGTGTTTACCCCGGTCGCGGGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAAc                                                                                                                             <  2:951876/231‑1 (MQ=255)
                                                                                                              aTGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCCTCGGCATCTCCCGCCCGCCAAACGGCACCTGATAAACggg                                                                                                                         >  2:899891/1‑239 (MQ=255)
                                                                                                               tGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGCAAGCTGAATG‑CCGCCGGTTCCCCAGCCGGAAGGCAACGGCATCCCCCGCCCGCCCAACGGCCCCTGCTACACgggg                                                                                                                        >  2:1212621/1‑239 (MQ=255)
                                                                                                                 cGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAACAGGCACCGGATAACCGGGGa                                                                                                                       >  2:434082/1‑238 (MQ=255)
                                                                                                                   gTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATTCCGCGCCCCCCAAACGGCACCTGATAACCGGGGATc                                                                                                                     >  2:911697/1‑238 (MQ=255)
                                                                                                                       cgctgttGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCa                                                                                                                 <  2:516529/232‑1 (MQ=255)
                                                                                                                       cgcgTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCa                                                                                                                 <  2:723242/238‑1 (MQ=255)
                                                                                                                         cgTCTGGATACCCGTGGCATCGTCCGTACGTTCCGTGGTGTTTACCCCTGTCGCGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCGGCA‑CGTCGCTTGCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCAcc                                                                                                               <  2:1078187/238‑1 (MQ=255)
                                                                                                                         cgTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCCGCCGTCCGGCCTCGGCATCTCCCCCCCGCCCAACGGCCCCTGGTACCCGGGGTTCGCCAcc                                                                                                               >  2:581450/1‑238 (MQ=255)
                                                                                                                           tCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCCCCGGTTCCCCAGCCGGACGGCATCGGCATTCCCCGCCCCCCCAACGGCACCCGATAAACCGGGGTAGCCACCg                                                                                                              >  2:114380/1‑237 (MQ=255)
                                                                                                                           tCTGGATAACCGGCGCATTCTCCGAACGTTCCGGGGTGTTTACCCCGGTGCCGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTCGGGGGTGTCATCCGCG‑CCCTGGGCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATACCGCTGGCGGGTAAGTTG‑CTT‑CCGCACGCTCCACCGCCGCGCGGCATCGGCGTTTCCCGCCCCCCCAACGCCACCCGTAAACCCGGGGGCGccgcacca                                                                                                            >  1:848498/1‑233 (MQ=255)
                                                                                                                                    ccGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCACCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCCCCTGCTAACCGGGGATCGCCACCGCTTTTAAAATg                                                                                                   >  2:812948/1‑239 (MQ=255)
                                                                                                                                         gCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCCCGCCCGCCAAACGGGACCTGATAACCGGGGGTCGCCACCCCCTTTTACATGgccag                                                                                              >  2:1085608/1‑236 (MQ=255)
                                                                                                                                          cattcgccGTACCTTCCGTGGTGTTTCCCCCGGTCCCGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCgcgg                                                                                             <  2:1267019/233‑1 (MQ=255)
                                                                                                                                               tCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCACTTCGCGCCCCCCAAACGGCCCCCGAAAAACGGGGATCGCCACCGCTTTTTAGATGGCGcggcggc                                                                                         >  2:231370/1‑237 (MQ=255)
                                                                                                                                                 ggcagttgtgtttaaggggcagccGGTCCCCGGCTTGAAGAAGTTGCGAA‑TCGACCCGGGGTGGGTGGTGTCATCCGCC‑CCCGGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCGGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCa                                                                                      <  1:362453/217‑1 (MQ=255)
                                                                                                                                                 cGTACGTTCCGTGGTTTTTGCCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCa                                                                                      <  2:532937/239‑1 (MQ=255)
                                                                                                                                                 cGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCCCCCGATAACCGGGGATCGCCCCCCCTTTTAAGATGGCGCGGCGGATCa                                                                                      >  2:128328/1‑239 (MQ=255)
                                                                                                                                                     cGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAACCTGAATG‑CCGCCGGTTCCCCAGCCGTACGCCACCGGCCTCTCGCGCCCGCCCAACCGCCCCTGACACCCGGGGGACCCCCCCCCTTTTCAAAGGGCGCCGGCGACCATGCg                                                                                  >  1:1037984/1‑239 (MQ=255)
                                                                                                                                                         ccGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGTC‑GGTAAGCTGAATG‑CCGCCCGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCCCCAAACGGGCCCCCGTAACCCGGGGTCGCCCCCCCCTTTAAGAAGGGCcggcgggcccagggggtg                                                                              >  1:464728/1‑227 (MQ=255)
                                                                                                                                                         ccGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGGTCGCCCCCGCTTTTAACATGGCGCGGGGGGTCATGCGTTTg                                                                              >  2:228468/1‑239 (MQ=255)
                                                                                                                                                         ccGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGGTCCCCAGCCGTACGGCATCGGCCTCTCGCGCCCGCCAAAAGGCACCCGATAACCGGGGGTCGCCACCCCTTTTCAGAGAGCGcggcggggcaagaccttg                                                                              >  1:257887/1‑227 (MQ=255)
                                                                                                                                                          cGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCCCCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTT‑CCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCaaa                                                                                                                                           <  2:394581/176‑1 (MQ=255)
                                                                                                                                                          cGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCCACTGTTAACCGGGGGTCGCCACCGCTTTTAAGATGGCGCGGCGGTGCCCGCGTTTgg                                                                             >  2:283059/1‑239 (MQ=255)
                                                                                                                                                          cGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCCCCCGCCAAACGGCACCCGGTAACCGGGGATCGCCACCGCTTTTAAGATGGCGGGGCGGATCATGCGTTggg                                                                             >  2:1294078/1‑239 (MQ=255)
                                                                                                                                                           gtggtgTTTCCCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGGGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGt                                                                            <  2:1100652/239‑1 (MQ=255)
                                                                                                                                                            tggtgTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTAc                                                                                                                                                                     <  2:83229/149‑1 (MQ=255)
                                                                                                                                                              gtttttCCCCCGGGCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCCTCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCt                                                                          <  2:1128223/235‑1 (MQ=255)
                                                                                                                                                               tgtTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCCCCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTg                                                                         <  2:464728/238‑1 (MQ=255)
                                                                                                                                                                 tttACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCCCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGGCTGCtc                                                                      >  2:49021/1‑239 (MQ=255)
                                                                                                                                                                 tttACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGGGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCC‑CGTCCCTTTCGCCAATCACCCTGGC‑GGTAAGCTGAATG‑CCCCCGGTTCCCCAGCCGCACGCCCCCGGCATCTCCCGCCCCCCAAACAGCCCCTGTGACCCGCGGAGCGCCACCCCCTTTGAGGTGCGGTGCCGGGTCATGCGTTggggtggccg                                                                      >  1:827427/1‑232 (MQ=255)
                                                                                                                                                                    aCCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGGTCCCCACCCGTACGGCAACGGCATCCCGCGCCCCCCAAACGGCACCTGCTAACCGGGGATCCCCCCCCCCTTTAAACTGGCCCGGCGGGCCATTCGGTTgggcgtgccgcc                                                                   >  1:763687/1‑229 (MQ=255)
                                                                                                                                                                       ccgtttcccgccgtGAAGAGGTTGCGAACCCGAC‑GGGCGGTGGTGGGGCCATCCGGC‑CCGTGGTCAATCCCCTTCAGCC‑CGTCGCTTTCGCCAATCACGCTGGG‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTCCGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAg                                                                <  1:924348/226‑1 (MQ=255)
                                                                                                                                                                        cGGTCCCGCGCTTGAAGAAGTTGCGAA‑TCGACCCGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAgg                                                               <  2:539663/239‑1 (MQ=255)
                                                                                                                                                                         ggTCGCGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCCGCCCTACGGCACCGGCCTCTCGCGCCCGCCAAACGGTCCCCGATAACCGGGGGTCGCCACCGCCTTTAAGCTGGGGCCGCGGCCCATACGCTTGGTGTGCtggcggcgga                                                              >  1:983917/1‑230 (MQ=255)
                                                                                                                                                                         ggTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGGACCTGATAACCGGGGATCGCCCCCGCCTTTAAGATGGCGCGGCGGGTCATGCGTTTGGTCTGCTCGTCGAggg                                                              >  2:458181/1‑238 (MQ=255)
                                                                                                                                                                         ggTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGTTAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGt                                                              >  2:924348/1‑239 (MQ=255)
                                                                                                                                                                           tCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCCTGCGTTTGGTCTGCCCGCCGAGGTAg                                                            >  2:899305/1‑239 (MQ=255)
                                                                                                                                                                                cgcTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCCAACGGCACCTGATAACCGGGGCTCGCCACCGCTTTTAAAATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCaaa                                                       >  2:939056/1‑239 (MQ=255)
                                                                                                                                                                                   ttGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACgg                                                                                                                                        <  2:640637/155‑1 (MQ=255)
                                                                                                                                                                                             tGCGAA‑TCGACACGGCGTTGGTGGTGTTATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGCTAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGGTCATGCGTTTGGTCTGCTCGTCGAGGGAGGCAAAGTTGTAGCCGCt                                           >  2:415973/1‑238 (MQ=255)
                                                                                                                                                                                             tGCGAA‑CCCACACGGGGTTGGGGGTGTCATCCGCG‑CCCTGGTCAATCTCCTTCAGCA‑CGTCGCTTTCGCCAAGCCCGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCt                                           <  2:36721/238‑1 (MQ=255)
                                                                                                                                                                                                gAA‑TGGACCCGGCGGTGGTGGTGTCTCCCGCC‑CCCTGGGCAACCCCCTCCAGCC‑GGGCGCCTTCGCCAATCCCGCGGGC‑GGTAAGCGAAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGa                                       <  1:1237394/239‑1 (MQ=255)
                                                                                                                                                                                                       gcatggggTTGGTGGTTTCCACCGCG‑CCCTGGTCAACCCCCTTCCGCA‑CGTCGCTTTCGCCAGTCCCGCTGGC‑GGTAAGCGCAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGcc                                 <  1:1067267/232‑1 (MQ=255)
                                                                                                                                                                                                        cccGGGGTTGGGGGTGTCATCCCGG‑CCCTGGTCAATCCCCTTCAGCC‑CGTCGCTTGCGCCAATCCCGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCa                                <  2:530090/237‑1 (MQ=255)
                                                                                                                                                                                                        cacGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTGCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCa                                <  2:916957/239‑1 (MQ=255)
                                                                                                                                                                                                         ccGGCGTTGGGGGTCGCCTCCGCC‑CCCTGGTACATCCCCTTCAGCC‑CTTCCCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCa                                <  2:1313931/237‑1 (MQ=255)
                                                                                                                                                                                                               ttGGTGGTGTCATCCGCG‑CCCTGGTCAATCCCCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTc                          <  2:405095/238‑1 (MQ=255)
                                                                                                                                                                                                                tggtggTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTg                        <  2:746291/239‑1 (MQ=255)
                                                                                                                                                                                                                tggtggGGTCAGCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCCCGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTg                        <  2:204053/239‑1 (MQ=255)
                                                                                                                                                                                                                       gtCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAACTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCCTTTAAGAGGGCGCGGCGGCTCATGCGTTTGGTCTGCCCCGCGCGGGAAGCAAAGGTGACGCCGCGCAGTGTAGCCCTTGGTCTGCCCgtgt                 >  1:1119697/1‑239 (MQ=255)
                                                                                                                                                                                                                       gtCATCCACG‑CCCTGTTCAACCACCTTCCGCT‑AGGCGCTTTCGCCAATCACGTCGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTg                  <  2:1109991/238‑1 (MQ=255)
                                                                                                                                                                                                                          aTCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTg                                                                         <  2:1227792/180‑1 (MQ=255)
                                                                                                                                                                                                                           cccGCG‑CCCGGGTCTATCACCTTCAGCC‑CGTCCCTTTCGCAACTCCCGCGGGG‑GTTACGCTGAACG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTTATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCa             <  1:415973/238‑1 (MQ=255)
                                                                                                                                                                                                                            tcccccccttGGTCAATCCCCTTCCTCC‑CGTCGCTTTCCCCAATCCCGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTCCGGCATCGGCATCTCTCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCa             <  1:205380/230‑1 (MQ=255)
                                                                                                                                                                                                                            ccccgccccTGGGTAATCCCCTTC‑GCACCGTCGCTGCCCACAATCCCGCTGGG‑GGTAAGGTGAAGT‑CCGCCGGTTCCCCAGGCGTACGGCAACGGCATCTCGCGGCCGCCGAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCa             <  1:1319427/233‑1 (MQ=255)
                                                                                                                                                                                                                            cccccccccTGGACAACACCCTCCAGCC‑CTTCCCTTTCCCCAACCCCGCGGGG‑GGTAACCGGAAGC‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCa             <  1:1122083/233‑1 (MQ=255)
                                                                                                                                                                                                                               cg‑cCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCCGCCGTACGGCCTCGGCATCTCGCGCCCGCCAAACGGCCCCCGATAACCGGGGATCGCCACCCCATTTAAGATGGCGCGGCGGATCATGCGGTTTGTCTGCTCCTCGGGGGAAGCACAGTTGTCGCCGCCCAGCTTTCGCCTGGTTTTGCTCCCCTTGCaacag         >  1:1090418/1‑235 (MQ=255)
                                                                                                                                                                                                                               cg‑cCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGACGGTTCCCCACCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCCCCTGATAACCGGGGATGGGCACCGCTTTCAAGATGGCGCGGCGGATCGCGCGTTTGGACTGCCCGGCGGGGTAGGCAACGTTGTACCACCTCAGACTTGCCACGGTTATCCTCCTGTTggaacag         >  1:569575/1‑233 (MQ=255)
                                                                                                                                                                                                                                g‑cCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCCCGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCAGACGt        <  2:1286709/239‑1 (MQ=255)
                                                                                                                                                                                                                                      ggTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGGTTAACCATGGTTTTGCTCCTGTTTCAGACGGTTGAg   >  2:301290/1‑239 (MQ=255)
                                                                                                                                                                                                                                      ggTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCAGACGTTTGAg   <  2:551622/239‑1 (MQ=255)
                                                                                                                                                                                                                                        tCAATCACCTTCAGCA‑CGTCCCTTTGGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCAGACGTTTGAGt  <  2:95786/238‑1 (MQ=255)
                                                                                                                                                                                                                                        acAATCCCCTTCCGGC‑CGTGTCTTTCGCCAATCCCCCTGGG‑CGTAACGGTAATG‑CCGCCGGTTCCCCAGCCGTACGGCAACGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCAGACGTTTGAGt  <  2:489313/237‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                          
GCGCGTGCATGGTGCGGGTTTCCGTTTCGCGCGGCTCGATAAAGCGCAGCGGCTCGGGGATTGGCACCTGGAAGATAATTATCTGATCTTCGGTCAGCGGCGTTTCGGGGATGCGGTGACGCGTCTGGATAACCGTCGCATCGTCCGTACGTTCCGTGGTGTTTACCCCGGTCACGCGCTTGAAGAAGTTGCGAA‑TCGACACGGCGTTGGTGGTGTCATCCGCG‑CCCTGGTCAATCACCTTCAGCA‑CGTCGCTTTCGCCAATCACGCTGGC‑GGTAAGCTGAATG‑CCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCAGACGTTTGAGT  >  NC_000913/4319169‑4319636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A