Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A22 F999 I0 R1
|
108 |
38.1 |
2810592 |
98.4% |
2765622 |
49.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
4,626,183 |
(GCG)3→2 |
coding (272‑274/1383 nt) |
radA → |
DNA recombination protein |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
4626176 |
4626178 |
3 |
16 [0] |
[0] 17 |
radA |
DNA recombination protein |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
4626179 = | 0 (0.000) | 13 (0.410) |
13/84 |
0.8 |
100% |
coding (268/1383 nt) |
radA |
DNA recombination protein |
| ? | NC_000913 |
= 4626175 |
0 (0.000) | coding (264/1383 nt) |
radA |
DNA recombination protein |
GATK/CNVnator alignment
N/A
