Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A28 F999 I0 R1 113 27.6 2102982 97.5% 2050407 48.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,626,183 (GCG)3→2 coding (272‑274/1383 nt) radA → DNA recombination protein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4626176 4626178 3 22 [0] [0] 24 radA DNA recombination protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4626179 =0 (0.000)17 (0.740) 14/82 0.3 100% coding (268/1383 nt) radA DNA recombination protein
?NC_000913 = 4626175 0 (0.000)coding (264/1383 nt) radA DNA recombination protein

GATK/CNVnator alignment

N/A